RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CDH5P33151 784 aaPredicted RBP13.88□□□□□ -0.19
CDH3-201ENST00000264012 CSKP41240 450 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 ACDQ96AP0 544 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 CLIP3Q96DZ5 547 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 NPY6RQ99463 290 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 IKZF3Q9UKT9 509 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 HS3ST4Q9Y661 456 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 RGPD1P0DJD0 1748 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 A0A1W2PRU2 124 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 OR51F1A6NGY5 319 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 AOC2O75106 756 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 CAPN1P07384 714 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 ADSLP30566 484 aaPredicted RBP13.87□□□□□ -0.19
CDH3-201ENST00000264012 NR1H2P55055 460 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 DGUOKQ16854 277 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 MTX3Q5HYI7 312 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 LPCAT4Q643R3 524 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 GLYATQ6IB77 296 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 CDC73Q6P1J9 531 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 RALGPS2Q86X27 583 aaPredicted RBP13.87□□□□□ -0.19
CDH3-201ENST00000264012 CFAP206Q8IYR0 622 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 LPGAT1Q92604 370 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 DENND2DQ9H6A0 471 aaPredicted RBP13.87□□□□□ -0.19
CDH3-201ENST00000264012 PNPLA3Q9NST1 481 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 LYVE1Q9Y5Y7 322 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 AGRPO00253 132 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 PIRO00625 290 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 NSG1P42857 185 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 RPL5P46777 297 aaKnown RBP13.87□□□□□ -0.19
CDH3-201ENST00000264012 XIAPP98170 497 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 FGD2Q7Z6J4 655 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 CTU1Q7Z7A3 348 aaKnown RBP13.87□□□□□ -0.19
CDH3-201ENST00000264012 SPPL2CQ8IUH8 684 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 ARMC8Q8IUR7 673 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 CAMKK1Q8N5S9 505 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 SLC47A1Q96FL8 570 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 OR10H1Q9Y4A9 318 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 PDE9AO76083 593 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 COL6A1P12109 1028 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 IDSP22304 550 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 SPIBQ01892 262 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 ANGPT1Q15389 498 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 RFX4Q33E94 735 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 SULT1C3Q6IMI6 304 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 SH3RF2Q8TEC5 729 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 AUTS2Q8WXX7 1259 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 POLR1BQ9H9Y6 1135 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 ZC4H2Q9NQZ6 224 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 ILVBLA1L0T0 632 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 PIP5K1BO14986 540 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 MGRN1O60291 552 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 EDNRBP24530 442 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 KCNQ1P51787 676 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 IRF9Q00978 393 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 TRAF3Q13114 568 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 DCTN2Q13561 401 aaKnown RBP13.87□□□□□ -0.19
CDH3-201ENST00000264012 PEX6Q13608 980 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 TIMM50Q3ZCQ8 353 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 ARMC4Q5T2S8 1044 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 CRTAC1Q9NQ79 661 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 FNIP2Q9P278 1114 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 SCML2Q9UQR0 700 aa13.87□□□□□ -0.19
CDH3-201ENST00000264012 ENPP3O14638 875 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 PRDX6P30041 224 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 ASMTP46597 345 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 GAD2Q05329 585 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 CHIT1Q13231 466 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 SF1Q15637 639 aaKnown RBP13.86□□□□□ -0.19
CDH3-201ENST00000264012 B3GNT6Q6ZMB0 384 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 C7orf61Q8IZ16 206 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 C19orf18Q8NEA5 215 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 ADCY4Q8NFM4 1077 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 OR2T34Q8NGX1 318 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 OR2T3Q8NH03 318 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 OR14C36Q8NHC7 312 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 C8orf48Q96LL4 319 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 PEBP4Q96S96 227 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 ZNF607Q96SK3 696 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 FAM159BA6NKW6 160 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 OR10H3O60404 316 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 ENO2P09104 434 aaPredicted RBP13.86□□□□□ -0.19
CDH3-201ENST00000264012 UQCRBP14927 111 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 PAFAH1B3Q15102 231 aaKnown RBP13.86□□□□□ -0.19
CDH3-201ENST00000264012 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.86□□□□□ -0.19
CDH3-201ENST00000264012 MACC1Q6ZN28 852 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 CROCCP3Q8IVE0 287 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 FAM20CQ8IXL6 584 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 OSBPL10Q9BXB5 764 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 UNC93B1Q9H1C4 597 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 RAB23Q9ULC3 237 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 ZNF780BQ9Y6R6 833 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 NEMP2A6NFY4 417 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 J3KR12 359 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 AQP1P29972 269 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 GPX6P59796 221 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 MSS51Q4VC12 460 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 LUZP2Q86TE4 346 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 DEPDC4Q8N2C3 294 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 PQLC3Q8N755 202 aa13.86□□□□□ -0.19
CDH3-201ENST00000264012 FIZ1Q96SL8 496 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms