RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 S100A1P23297 94 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 CD83Q01151 205 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 CLCQ05315 142 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 DNASE1L3Q13609 305 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 LCN1P1Q5VSP4 162 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 SPATA19Q7Z5L4 167 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 ANKRD23Q86SG2 305 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 SLC51AQ86UW1 340 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 VSIG10LQ86VR7 867 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 SLC9A9Q8IVB4 645 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 TMEM86AQ8N2M4 240 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 BANPQ8N9N5 519 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 EIF3KQ9UBQ5 218 aaKnown RBP11.97□□□□□ -0.49
SMG6-201ENST00000263073 EIF2B4Q9UI10 523 aaKnown RBP11.97□□□□□ -0.49
SMG6-201ENST00000263073 TMEM233B4DJY2 109 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 ECDO95905 644 aaPredicted RBP11.97□□□□□ -0.49
SMG6-201ENST00000263073 COL3A1P02461 1466 aaPredicted RBP11.97□□□□□ -0.49
SMG6-201ENST00000263073 ITGB1P05556 798 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 WDR4P57081 412 aaKnown RBP11.97□□□□□ -0.49
SMG6-201ENST00000263073 TARBP2Q15633 366 aaKnown RBP11.97□□□□□ -0.49
SMG6-201ENST00000263073 LSM14AQ8ND56 463 aaKnown RBP11.97□□□□□ -0.49
SMG6-201ENST00000263073 CENPNQ96H22 339 aaPredicted RBP11.97□□□□□ -0.49
SMG6-201ENST00000263073 HSFY1Q96LI6 401 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 CORO1BQ9BR76 489 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 ATP13A3Q9H7F0 1226 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 NEMP2A6NFY4 417 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 LRRC14BA6NHZ5 514 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 IL1BP01584 269 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 CES1P23141 567 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 SDC2P34741 201 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 NDUFV1P49821 464 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 MAZP56270 477 aaKnown RBP11.97□□□□□ -0.49
SMG6-201ENST00000263073 SNRPD1P62314 119 aaKnown RBP11.97□□□□□ -0.49
SMG6-201ENST00000263073 MBTD1Q05BQ5 628 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 ENPEPQ07075 957 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 DLG1Q12959 904 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 SLC25A52Q3SY17 297 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 ZDHHC24Q6UX98 284 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 EXOSC8Q96B26 276 aaKnown RBP11.97□□□□□ -0.49
SMG6-201ENST00000263073 SEC14L3Q9UDX4 400 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 SLC7A8Q9UHI5 535 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 IKZF2Q9UKS7 526 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 VWDEQ8N2E2 1590 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 KLRG2A4D1S0 409 aaPredicted RBP11.97□□□□□ -0.49
SMG6-201ENST00000263073 C9IYK1 514 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 ACSL4O60488 711 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 SAGP10523 405 aaPredicted RBP11.97□□□□□ -0.49
SMG6-201ENST00000263073 GJA9P57773 515 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 DCAF12L1Q5VU92 463 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 ANO7Q6IWH7 933 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.97□□□□□ -0.49
SMG6-201ENST00000263073 SLC26A9Q7LBE3 791 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 TRPV1Q8NER1 839 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 NKD1Q969G9 470 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 PIWIL1Q96J94 861 aaKnown RBP11.97□□□□□ -0.49
SMG6-201ENST00000263073 ZNF607Q96SK3 696 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 PTPN18Q99952 460 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 DUSP16Q9BY84 665 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 UNC93B1Q9H1C4 597 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 PTTG2Q9NZH5 202 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 PCDHB12Q9Y5F1 795 aa11.97□□□□□ -0.49
SMG6-201ENST00000263073 MID1O15344 667 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 MTRF1O75570 445 aaKnown RBP11.96□□□□□ -0.49
SMG6-201ENST00000263073 HNMTP50135 292 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 ZNF135P52742 658 aaPredicted RBP11.96□□□□□ -0.49
SMG6-201ENST00000263073 ZNHIT3Q15649 155 aaPredicted RBP11.96□□□□□ -0.49
SMG6-201ENST00000263073 SYT16Q17RD7 645 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 TEX44Q53QW1 395 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 IDNKQ5T6J7 187 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 RPS27LQ71UM5 84 aaKnown RBP11.96□□□□□ -0.49
SMG6-201ENST00000263073 FSTL5Q8N475 847 aaPredicted RBP11.96□□□□□ -0.49
SMG6-201ENST00000263073 CLEC4CQ8WTT0 213 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 PREBQ9HCU5 417 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 GTPBP1O00178 669 aaKnown RBP11.96□□□□□ -0.49
SMG6-201ENST00000263073 TRAFD1O14545 582 aaPredicted RBP11.96□□□□□ -0.49
SMG6-201ENST00000263073 PLIN3O60664 434 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 SERPINB7O75635 380 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 KDM4BO94953 1096 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 HOXB8P17481 243 aaPredicted RBP11.96□□□□□ -0.49
SMG6-201ENST00000263073 HDCP19113 662 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 GRIA1P42261 906 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 CCR10P46092 362 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 GNPDA1P46926 289 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 OR2B6P58173 313 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 ATP6V0D1P61421 351 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 CCNYL2Q5T2Q4 361 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 HECTD3Q5T447 861 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 NT5DC4Q86YG4 428 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 ZFP3Q96NJ6 502 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 QRFPRQ96P65 431 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 FAIM2Q9BWQ8 316 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 KANSL3Q9P2N6 904 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 SAP18O00422 153 aaKnown RBP11.96□□□□□ -0.49
SMG6-201ENST00000263073 SEPT4O43236 478 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 DBIP07108 87 aaKnown RBP11.96□□□□□ -0.49
SMG6-201ENST00000263073 GRB14Q14449 540 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 BMT2Q1RMZ1 405 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 MAP1SQ66K74 1059 aaPredicted RBP11.96□□□□□ -0.49
SMG6-201ENST00000263073 FAM124AQ86V42 546 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 HJURPQ8NCD3 748 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms