RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 RGS21Q2M5E4 152 aa12.88□□□□□ -0.35
SNX1-201ENST00000261889 ZNF829Q3KNS6 432 aaPredicted RBP12.88□□□□□ -0.35
SNX1-201ENST00000261889 BNIPLQ7Z465 357 aa12.88□□□□□ -0.35
SNX1-201ENST00000261889 C10orf111Q8N326 155 aa12.88□□□□□ -0.35
SNX1-201ENST00000261889 GLMNQ92990 594 aa12.88□□□□□ -0.35
SNX1-201ENST00000261889 GPR21Q99679 349 aa12.88□□□□□ -0.35
SNX1-201ENST00000261889 SPON2Q9BUD6 331 aa12.88□□□□□ -0.35
SNX1-201ENST00000261889 FAM8A1Q9UBU6 413 aa12.88□□□□□ -0.35
SNX1-201ENST00000261889 HS3ST4Q9Y661 456 aa12.88□□□□□ -0.35
SNX1-201ENST00000261889 E9PAM4 449 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 RASAL1O95294 804 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 LBPP18428 481 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 NCS1P62166 190 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 TMEM53Q6P2H8 277 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 TMEM179BQ7Z7N9 219 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 PGBD5Q8N414 524 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 KLHDC9Q8NEP7 349 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 ABHD11Q8NFV4 315 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 PPTC7Q8NI37 304 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 BIRC8Q96P09 236 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 NFKBIZQ9BYH8 718 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 NOL6Q9H6R4 1146 aaKnown RBP12.87□□□□□ -0.35
SNX1-201ENST00000261889 NTN4Q9HB63 628 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 VPS45Q9NRW7 570 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 FARSBQ9NSD9 589 aaKnown RBP12.87□□□□□ -0.35
SNX1-201ENST00000261889 POLR3HQ9Y535 204 aaPredicted RBP12.87□□□□□ -0.35
SNX1-201ENST00000261889 SQORQ9Y6N5 450 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 ZNF487B1APH4 448 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 KDM1AO60341 852 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 ECI2O75521 394 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 HTR1AP08908 422 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 G6PDP11413 515 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 EPHA2P29317 976 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 TIAL1Q01085 375 aaKnown RBP eCLIP12.87□□□□□ -0.352e-8■■■■■ 28.9
SNX1-201ENST00000261889 DPY19L1Q2PZI1 675 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 SOWAHCQ53LP3 525 aaPredicted RBP12.87□□□□□ -0.35
SNX1-201ENST00000261889 XAF1Q6GPH4 301 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 FAM45BPQ6NSW5 357 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 REM2Q8IYK8 340 aaPredicted RBP12.87□□□□□ -0.35
SNX1-201ENST00000261889 FBXO39Q8N4B4 442 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 FAM45AQ8TCE6 357 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 UBXN10Q96LJ8 280 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 ZIC5Q96T25 663 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 PAK1IP1Q9NWT1 392 aaPredicted RBP12.87□□□□□ -0.35
SNX1-201ENST00000261889 DOCK3Q8IZD9 2030 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 AP3B1O00203 1094 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 BCAS1O75363 584 aaPredicted RBP12.87□□□□□ -0.35
SNX1-201ENST00000261889 CYBBP04839 570 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 RBP1P09455 135 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 SLC2A3P11169 496 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 ADRA1AP35348 466 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 ZNF157P51786 506 aaPredicted RBP12.87□□□□□ -0.35
SNX1-201ENST00000261889 GEMP55040 296 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 TRAP1Q12931 704 aaKnown RBP12.87□□□□□ -0.35
SNX1-201ENST00000261889 FAM117BQ6P1L5 589 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 C17orf99Q6UX52 265 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 TTC39CQ8N584 583 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 KRTCAP2Q8N6L1 136 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 RMDN1Q96DB5 314 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 NSMCE2Q96MF7 247 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 FCRL5Q96RD9 977 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 ZNHIT2Q9UHR6 403 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 NEU3Q9UQ49 428 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 SZT2Q5T011 3432 aa12.87□□□□□ -0.35
SNX1-201ENST00000261889 MATN3O15232 486 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 PRSS23O95084 383 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 CAPNS1P04632 268 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 TUBA4AP68366 448 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 COL9A2Q14055 689 aaPredicted RBP12.86□□□□□ -0.35
SNX1-201ENST00000261889 PIK3R6Q5UE93 754 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 GCNT7Q6ZNI0 430 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 SLCO6A1Q86UG4 719 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 CDC26Q8NHZ8 85 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 ITFG1Q8TB96 612 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 HGH1Q9BTY7 390 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 AMBRA1Q9C0C7 1298 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 ARMC1Q9NVT9 282 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 ACTR3BQ9P1U1 418 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 PADI4Q9UM07 663 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 CAB39Q9Y376 341 aaPredicted RBP12.86□□□□□ -0.35
SNX1-201ENST00000261889 PCDHA9Q9Y5H5 950 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 A0A0D9SEW6 157 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 MYO1GB0I1T2 1018 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 HHLA1C9JL84 531 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 FADS2O95864 444 aaKnown RBP12.86□□□□□ -0.35
SNX1-201ENST00000261889 PSMB9P28065 219 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 ARSFP54793 590 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 ATP6V0D1P61421 351 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 IL5RAQ01344 420 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 GTF2H3Q13889 308 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 C1QTNF12Q5T7M4 302 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 IL27RAQ6UWB1 636 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 TMEM126BQ8IUX1 230 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 PHYKPLQ8IUZ5 450 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 TNIP2Q8NFZ5 429 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 OR6K2Q8NGY2 324 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 PSMA8Q8TAA3 256 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 ABCB10Q9NRK6 738 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 SLC6A13Q9NSD5 602 aa12.86□□□□□ -0.35
SNX1-201ENST00000261889 GIN1Q9NXP7 522 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms