RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 hCG_2039718K7EN88 272 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 MSI1O43347 362 aaKnown RBP16.08■□□□□ 0.16
SREBF1-201ENST00000261646 RHOCP08134 193 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 MYL12AP19105 171 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 CLCN2P51788 898 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 EEFSECP57772 596 aaKnown RBP16.08■□□□□ 0.16
SREBF1-201ENST00000261646 FCHO2Q0JRZ9 810 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 MZT2BQ6NZ67 158 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 ANKRD46Q86W74 232 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 DEPDC4Q8N2C3 294 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 GPR20Q99678 358 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 COPS4Q9BT78 406 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 RPF2Q9H7B2 306 aaKnown RBP16.08■□□□□ 0.16
SREBF1-201ENST00000261646 ABCC13Q9NSE7 274 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 TOR4AQ9NXH8 423 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 SIX4Q9UIU6 781 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 COL6A1P12109 1028 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 CDH1P12830 882 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 GGT5P36269 586 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 CRATP43155 626 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 MAGEA10P43363 369 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-201ENST00000261646 ALDH3A2P51648 485 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 NKX2-5P52952 324 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-201ENST00000261646 BEX3Q00994 111 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 ANKDD1AQ495B1 522 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 TSTD2Q5T7W7 516 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 RAP1GAP2Q684P5 730 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 METTL25Q8N6Q8 603 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 NSMCE3Q96MG7 304 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 ATP13A1Q9HD20 1204 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 ABCB9Q9NP78 766 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 CPA4Q9UI42 421 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 STYXL1Q9Y6J8 313 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 SOWAHBA6NEL2 793 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 SNTNA6NMZ2 147 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 YJEFN3A6XGL0 299 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 CXCR6O00574 342 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 PRKD3O94806 890 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 RXRGP48443 463 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 RHOAP61586 193 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 OLR1P78380 273 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 ZNF284Q2VY69 593 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 KIAA0930Q6ICG6 404 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-201ENST00000261646 HID1Q8IV36 788 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 ZDHHC21Q8IVQ6 265 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 SVOPLQ8N434 492 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 ZUFSPQ96AP4 578 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 ANKRD60Q9BZ19 345 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 XYLT2Q9H1B5 865 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 AGO3Q9H9G7 860 aaKnown RBP16.07■□□□□ 0.16
SREBF1-201ENST00000261646 CACNA1SQ13698 1873 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 A8MX80 341 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 XPNPEP2O43895 674 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 XYLBO75191 536 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 FUT4P22083 530 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 CTSKP43235 329 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 HLCSP50747 726 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 DGKQP52824 942 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 AIF1P55008 147 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 FAM174BQ3ZCQ3 159 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 TMEM236Q5W0B7 351 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 GLB1LQ6UWU2 654 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 EIF3MQ7L2H7 374 aaKnown RBP16.07■□□□□ 0.16
SREBF1-201ENST00000261646 SLC15A3Q8IY34 581 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 ARFGAP1Q8N6T3 406 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 OR10Q1Q8NGQ4 319 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 KCNS3Q9BQ31 491 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 PRRG3Q9BZD7 231 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 GMIPQ9P107 970 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 ZNF624Q9P2J8 865 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-201ENST00000261646 SAMD4AQ9UPU9 718 aaKnown RBP16.07■□□□□ 0.16
SREBF1-201ENST00000261646 PEX16Q9Y5Y5 336 aa16.07■□□□□ 0.16
SREBF1-201ENST00000261646 GPR182O15218 404 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 C8BP07358 591 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 UROSP10746 265 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 GLDCP23378 1020 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 HERVK_113P63132 956 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 DSC2Q02487 901 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 LILRA2Q8N149 483 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 C2orf69Q8N8R5 385 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 YME1L1Q96TA2 773 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 ERVK-6Q9BXR3 956 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 CRISPLD1Q9H336 500 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 MROH8Q9H579 483 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 PIGVQ9NUD9 493 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 CLN6Q9NWW5 311 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 C7orf72A4D263 438 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 IFRD1O00458 451 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-201ENST00000261646 NRP1O14786 923 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 ATE1O95260 518 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 ITIH1P19827 911 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 CXCR3P49682 368 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 DIO3P55073 304 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 SLC13A2Q13183 592 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 INTS6LQ5JSJ4 861 aaKnown RBP16.06■□□□□ 0.16
SREBF1-201ENST00000261646 PRR23BQ6ZRT6 265 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 SLC16A10Q8TF71 515 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 BCO2Q9BYV7 579 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 FZD8Q9H461 694 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 ENOPH1Q9UHY7 261 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms