RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 CCDC28AQ8IWP9 274 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZNF433Q8N7K0 673 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 NSMCE3Q96MG7 304 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 BHLHE41Q9C0J9 482 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 DCSTAMPQ9H295 470 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 GOLGA2P5Q9HBQ8 144 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 INTS7Q9NVH2 962 aaKnown RBP9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 COL20A1Q9P218 1284 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 CPA4Q9UI42 421 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 PSME2Q9UL46 239 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 SPACA6W5XKT8 324 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 ILVBLA1L0T0 632 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 CXorf49A8MYA2 514 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 SLC22A1O15245 554 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 NR2F1P10589 423 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ARF4P18085 180 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 SLC6A2P23975 617 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 HOXA10P31260 410 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 BUD31P41223 144 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 MAN2A2P49641 1150 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 WNT3AP56704 352 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 NPTX1Q15818 432 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 TIGD6Q17RP2 521 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 MYLK3Q32MK0 819 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 TMEM236Q5W0B7 351 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 PEG10Q86TG7 708 aaKnown RBP9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 POMGNT2Q8NAT1 580 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 PJA1Q8NG27 643 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 SLC22A4Q9H015 551 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 PRDM16Q9HAZ2 1276 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 MARCH2Q9P0N8 246 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 UXTQ9UBK9 157 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 VPS51Q9UID3 782 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 RIPK3Q9Y572 518 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 CCL22O00626 93 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 SLC7A1P30825 629 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 VBP1P61758 197 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 IRF9Q00978 393 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 GPR153Q6NV75 609 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 CYP20A1Q6UW02 462 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ABHD15Q6UXT9 468 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ASB18Q6ZVZ8 466 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 UNC5BQ8IZJ1 945 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ATL1Q8WXF7 558 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 COL26A1Q96A83 441 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ERMAPQ96PL5 475 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 TBC1D17Q9HA65 648 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 TESMINQ9Y4I5 508 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 CILPO75339 1184 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 IL7RP16871 459 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 HOXB8P17481 243 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 CCR4P51679 360 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 CYP4V2Q6ZWL3 525 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 SPATA22Q8NHS9 363 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 DCAKDQ8WVC6 231 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZSCAN5AQ9BUG6 496 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 MTFR1LQ9H019 292 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ASB8Q9H765 288 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 TMPRSS4Q9NRS4 437 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 MYH2Q9UKX2 1941 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZNF432O94892 652 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 LRG1P02750 347 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ALDH3A2P51648 485 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 BEX3Q00994 111 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 TEX44Q53QW1 395 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 HECTD2Q5U5R9 776 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 CATSPERGQ6ZRH7 1159 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ANKRD46Q86W74 232 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ELMOD2Q8IZ81 293 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZNF366Q8N895 744 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 TNFAIP8L1Q8WVP5 186 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 OR52B2Q96RD2 323 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZNF717Q9BY31 904 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 CUEDC1Q9NWM3 386 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 H7C4K7 107 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 K7EPI3 171 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 M0QX08 132 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 PIP5K1BO14986 540 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ITGB1P05556 798 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 NMBRP28336 390 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 TRIM48Q8IWZ4 208 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 CHPFQ8IZ52 775 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZNF567Q8N184 647 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 FNDC8Q8TC99 324 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 LPPQ93052 612 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZC3H10Q96K80 434 aaKnown RBP9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 RSPH9Q9H1X1 276 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 DSN1Q9H410 356 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 IRAK3Q9Y616 596 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 PEAK1Q9H792 1746 aa9.67□□□□□ -0.86
CTDSPL2-201ENST00000260327 RSL1D1O76021 490 aaKnown RBP9.66□□□□□ -0.86
CTDSPL2-201ENST00000260327 LIMK2P53671 638 aa9.66□□□□□ -0.86
CTDSPL2-201ENST00000260327 SWI5Q1ZZU3 235 aa9.66□□□□□ -0.86
CTDSPL2-201ENST00000260327 LCLAT1Q6UWP7 414 aa9.66□□□□□ -0.86
CTDSPL2-201ENST00000260327 FAM220AQ7Z4H9 259 aa9.66□□□□□ -0.86
CTDSPL2-201ENST00000260327 R3HCC1LQ7Z5L2 792 aaKnown RBP9.66□□□□□ -0.86
CTDSPL2-201ENST00000260327 PHTF2Q8N3S3 785 aa9.66□□□□□ -0.86
CTDSPL2-201ENST00000260327 NAT8LQ8N9F0 302 aa9.66□□□□□ -0.86
CTDSPL2-201ENST00000260327 REPS1Q96D71 796 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms