RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 AASDHQ4L235 1098 aaPredicted RBP11.86□□□□□ -0.51
USHBP1-201ENST00000252597 FAM98BQ52LJ0 330 aaKnown RBP11.86□□□□□ -0.51
USHBP1-201ENST00000252597 CYBRD1Q53TN4 286 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 CCNYL2Q5T2Q4 361 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 TIGD7Q6NT04 549 aaPredicted RBP11.86□□□□□ -0.51
USHBP1-201ENST00000252597 ENPP6Q6UWR7 440 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 DCDC5Q6ZRR9 648 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 KIAA2013Q8IYS2 634 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 DCP1BQ8IZD4 617 aaKnown RBP11.86□□□□□ -0.51
USHBP1-201ENST00000252597 PNPT1Q8TCS8 783 aaKnown RBP11.86□□□□□ -0.51
USHBP1-201ENST00000252597 FRS2Q8WU20 508 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 NT5C3BQ969T7 300 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 LINGO1Q96FE5 620 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 FAM105AQ9NUU6 356 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 ADGRE2Q9UHX3 823 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 ASB1Q9Y576 335 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 ARL5CA6NH57 179 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 FXYD1O00168 92 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 CBX4O00257 560 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 IRAK2O43187 625 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 PIM1P11309 404 aaPredicted RBP11.86□□□□□ -0.51
USHBP1-201ENST00000252597 MYF6P23409 242 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 MAP2K4P45985 399 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 CCT8P50990 548 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 TBX4P57082 545 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 VBP1P61758 197 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 CYP4F2P78329 520 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 CYP4F3Q08477 520 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 SEMA3BQ13214 749 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 PPIL2Q13356 520 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 SLC36A3Q495N2 470 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 GTDC1Q4AE62 458 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 SMYD5Q6GMV2 418 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 FAM45BPQ6NSW5 357 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 ZNF549Q6P9A3 640 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 LINGO4Q6UY18 593 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 TMEM126BQ8IUX1 230 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 MICU2Q8IYU8 434 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 SLC7A5P1Q8MH63 180 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 OR7D4Q8NG98 312 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 OR4L1Q8NH43 312 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 STAG3L4Q8TBR4 150 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 FAM45AQ8TCE6 357 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 OSCP1Q8WVF1 389 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 ACDQ96AP0 544 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 ROPN1LQ96C74 230 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 MYRFLQ96LU7 910 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 SEZ6LQ9BYH1 1024 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 RERGLQ9H628 205 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 LATS2Q9NRM7 1088 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 TAS2R13Q9NYV9 303 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 TRMT6Q9UJA5 497 aaKnown RBP11.86□□□□□ -0.51
USHBP1-201ENST00000252597 DERAQ9Y315 318 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 PCDHB3Q9Y5E6 796 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 GMEB1Q9Y692 573 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 MGAMO43451 1857 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 DLGAP1O14490 977 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 DFNA5O60443 496 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 FADS2O95864 444 aaKnown RBP11.86□□□□□ -0.51
USHBP1-201ENST00000252597 IDO1P14902 403 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 CD1DP15813 335 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 JAK1P23458 1154 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 HALP42357 657 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 OR1G1P47890 313 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 BCAP31P51572 246 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 CASP9P55211 416 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 ATP6V0D1P61421 351 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 DUSP28Q4G0W2 176 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 GNASQ5JWF2 1037 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 UBXN11Q5T124 520 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 SYVN1Q86TM6 617 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 RBM12BQ8IXT5 1001 aaKnown RBP11.86□□□□□ -0.51
USHBP1-201ENST00000252597 SLC22A15Q8IZD6 547 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 OR10T2Q8NGX3 314 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 VTA1Q9NP79 307 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.86□□□□□ -0.51
USHBP1-201ENST00000252597 ORC6Q9Y5N6 252 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 HTTP42858 3142 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 WDR81Q562E7 1941 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 AQP12BA6NM10 295 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 MITFO75030 526 aaPredicted RBP11.85□□□□□ -0.51
USHBP1-201ENST00000252597 FKBP9O95302 570 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 ABCB1P08183 1280 aaPredicted RBP11.85□□□□□ -0.51
USHBP1-201ENST00000252597 PCYT1AP49585 367 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 ARSFP54793 590 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 BNIP2Q12982 314 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 LCP2Q13094 533 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 PRKG2Q13237 762 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 SPCS2Q15005 226 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 CCL14Q16627 93 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 BORAQ6PGQ7 559 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 FKBP9P1Q75LS8 142 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 GLT6D1Q7Z4J2 308 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 AQP12AQ8IXF9 295 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 KCTD13Q8WZ19 329 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 ULK4Q96C45 1275 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 C6orf62Q9GZU0 229 aaPredicted RBP11.85□□□□□ -0.51
USHBP1-201ENST00000252597 TREX1Q9NSU2 369 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 KLQ9UEF7 1012 aa11.85□□□□□ -0.51
USHBP1-201ENST00000252597 LEF1Q9UJU2 399 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms