RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 VARS2Q5ST30 1063 aaKnown RBP18.78■□□□□ 0.6
SNX4-201ENST00000251775 BROXQ5VW32 411 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 RAP1GAP2Q684P5 730 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 IFNEQ86WN2 208 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 TBC1D21Q8IYX1 336 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 ABHD11Q8NFV4 315 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 ARRDC2Q8TBH0 407 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 FATE1Q969F0 183 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 TMEM125Q96AQ2 219 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 ALPK1Q96QP1 1244 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 MROQ9BYG7 248 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 ATAD3AQ9NVI7 634 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 DNAJC15Q9Y5T4 150 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 IGLV3-10A0A075B6K4 115 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 GJB3O75712 270 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 SHMT2P34897 504 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 CLCN5P51795 746 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 ZNF678Q5SXM1 525 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 HECTD2Q5U5R9 776 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 CIR1Q86X95 450 aaPredicted RBP18.78■□□□□ 0.6
SNX4-201ENST00000251775 MIB1Q86YT6 1006 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 PHYKPLQ8IUZ5 450 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 MIER2Q8N344 545 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 TEX26Q8N6G2 289 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 ZNF347Q96SE7 839 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 RAD21L1Q9H4I0 556 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 DAPK2Q9UIK4 370 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 ANAPC2Q9UJX6 822 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 KCTD3Q9Y597 815 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 GPC6Q9Y625 555 aaPredicted RBP18.78■□□□□ 0.6
SNX4-201ENST00000251775 OR51F1A6NGY5 319 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 TMEM189-UBE2V1I3L0A0 370 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 AQP9O43315 295 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 LDLRP01130 860 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 HMBSP08397 361 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 CBX2Q14781 532 aaPredicted RBP18.77■□□□□ 0.6
SNX4-201ENST00000251775 ACAP2Q15057 778 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 UNC50Q53HI1 259 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 RABL3Q5HYI8 236 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 SIRPB2Q5JXA9 342 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 SLC24A5Q71RS6 500 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 PTRH1Q86Y79 214 aaKnown RBP18.77■□□□□ 0.6
SNX4-201ENST00000251775 CILP2Q8IUL8 1156 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 TMCO5AQ8N6Q1 288 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 ATP6V0D2Q8N8Y2 350 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 SH3RF2Q8TEC5 729 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 ERLEC1Q96DZ1 483 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 L3HYPDHQ96EM0 354 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 UBXN10Q96LJ8 280 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 SLC52A3Q9NQ40 469 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 MARCH4Q9P2E8 410 aaPredicted RBP18.77■□□□□ 0.6
SNX4-201ENST00000251775 UXTQ9UBK9 157 aaPredicted RBP18.77■□□□□ 0.6
SNX4-201ENST00000251775 PCDHB5Q9Y5E4 795 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 DYTNA2CJ06 578 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 MROH6A6NGR9 719 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 ABCB7O75027 752 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 PAPSS2O95340 614 aaPredicted RBP18.77■□□□□ 0.6
SNX4-201ENST00000251775 EOMESO95936 686 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 CKBP12277 381 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 ZNF24P17028 368 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 SOX11P35716 441 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 KPNA1P52294 538 aaPredicted RBP18.77■□□□□ 0.6
SNX4-201ENST00000251775 PLA2G16P53816 162 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 CDH13P55290 713 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 ZIK1Q3SY52 487 aaPredicted RBP18.77■□□□□ 0.6
SNX4-201ENST00000251775 TMEM207Q6UWW9 146 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 CLYBLQ8N0X4 340 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 OR6P1Q8NGX9 317 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 SGCDQ92629 289 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 MYEOVQ96EZ4 313 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 SH3YL1Q96HL8 342 aaPredicted RBP18.77■□□□□ 0.6
SNX4-201ENST00000251775 B3GALT6Q96L58 329 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 ALG2Q9H553 416 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 ALG9Q9H6U8 611 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 IL37Q9NZH6 218 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 SLC27A5Q9Y2P5 690 aa18.77■□□□□ 0.6
SNX4-201ENST00000251775 GREB1Q4ZG55 1949 aa18.77■□□□□ 0.59
SNX4-201ENST00000251775 CA12O43570 354 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 ALBP02768 609 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 ATXN1LP0C7T5 689 aaKnown RBP18.76■□□□□ 0.59
SNX4-201ENST00000251775 PRKAR2AP13861 404 aaKnown RBP18.76■□□□□ 0.59
SNX4-201ENST00000251775 ELNP15502 786 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 CST5P28325 142 aaPredicted RBP18.76■□□□□ 0.59
SNX4-201ENST00000251775 SH3BP2P78314 561 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 AQP6Q13520 282 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 SPCS2Q15005 226 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 SLC14A2Q15849 920 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 TRAF7Q6Q0C0 670 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 SCAIQ8N9R8 606 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 DNAJB14Q8TBM8 379 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 TADA1Q96BN2 335 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 NRBF2Q96F24 287 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 BTN2A3PQ96KV6 586 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 BEGAINQ9BUH8 593 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.76■□□□□ 0.59
SNX4-201ENST00000251775 PPP6CO00743 305 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 SLC7A4O43246 635 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 MATN4O95460 622 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 S1PR4O95977 384 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 CDKN2DP55273 166 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms