RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 OXTRP30559 389 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 SLC5A2P31639 672 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 MC4RP32245 332 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 CLCN4P51793 760 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 POLR2JP52435 117 aaKnown RBP16.27■□□□□ 0.19
HOXD3-201ENST00000249440 PDCD4Q53EL6 469 aaKnown RBP16.27■□□□□ 0.19
HOXD3-201ENST00000249440 TMTC4Q5T4D3 741 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 PSAPL1Q6NUJ1 521 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 TRAF7Q6Q0C0 670 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 RSPO2Q6UXX9 243 aaPredicted RBP16.27■□□□□ 0.19
HOXD3-201ENST00000249440 GPSM1Q86YR5 675 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 CMTR2Q8IYT2 770 aaKnown RBP16.27■□□□□ 0.19
HOXD3-201ENST00000249440 TMEM199Q8N511 208 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 SIDT2Q8NBJ9 832 aaKnown RBP16.27■□□□□ 0.19
HOXD3-201ENST00000249440 LPCAT1Q8NF37 534 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 GRIN3AQ8TCU5 1115 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 C2orf15Q8WU43 125 aaKnown RBP16.27■□□□□ 0.19
HOXD3-201ENST00000249440 SLC30A3Q99726 388 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 TMEM45AQ9NWC5 275 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 SMOXQ9NWM0 555 aa16.27■□□□□ 0.19
HOXD3-201ENST00000249440 TUBA8Q9NY65 449 aaPredicted RBP16.27■□□□□ 0.19
HOXD3-201ENST00000249440 PTBP2Q9UKA9 531 aaKnown RBP16.27■□□□□ 0.19
HOXD3-201ENST00000249440 AGO1Q9UL18 857 aaKnown RBP16.27■□□□□ 0.19
HOXD3-201ENST00000249440 CASP8AP2Q9UKL3 1982 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 SLC38A8A6NNN8 435 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 ANKRD66B4E2M5 251 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 H3BNC9 293 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 DLGAP1O14490 977 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 NIPSNAP2O75323 286 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 BMP10O95393 424 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 VNN2O95498 520 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 ALDH1A1P00352 501 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 NPPAP01160 153 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
HOXD3-201ENST00000249440 UGT1A6P19224 532 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 MYF6P23409 242 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 PCSK6P29122 969 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 ZFP36L2P47974 494 aaKnown RBP16.26■□□□□ 0.19
HOXD3-201ENST00000249440 UFM1P61960 85 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 RPS24P62847 133 aaKnown RBP16.26■□□□□ 0.19
HOXD3-201ENST00000249440 LIPEQ05469 1076 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 KCTD21Q4G0X4 260 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 RABL3Q5HYI8 236 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 PAGE3Q5JUK9 113 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 UGT3A1Q6NUS8 523 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 GPRIN3Q6ZVF9 776 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 RNF180Q86T96 592 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 PIANPQ8IYJ0 282 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 EEF1AKMT1Q8WVE0 214 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 KCNJ9Q92806 393 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 TRIM8Q9BZR9 551 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 CD274Q9NZQ7 290 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 ZIM2Q9NZV7 527 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 FKBPLQ9UIM3 349 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 PCDHGC4Q9Y5F7 938 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 RAI2Q9Y5P3 530 aa16.26■□□□□ 0.19
HOXD3-201ENST00000249440 ILVBLA1L0T0 632 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 ASPDHA6ND91 283 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 E5RI56 91 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 E2F3O00716 465 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 OR1I1O60431 355 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 CDK9P50750 372 aaKnown RBP16.25■□□□□ 0.19
HOXD3-201ENST00000249440 ACLYP53396 1101 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 EEFSECP57772 596 aaKnown RBP16.25■□□□□ 0.19
HOXD3-201ENST00000249440 BIRC2Q13490 618 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 ATP6AP1Q15904 470 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 FUT11Q495W5 492 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 TTC33Q6PID6 262 aaPredicted RBP16.25■□□□□ 0.19
HOXD3-201ENST00000249440 TNIP2Q8NFZ5 429 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 CD200R1Q8TD46 325 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 LINGO1Q96FE5 620 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 ZBED2Q9BTP6 218 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 OAZ3Q9UMX2 235 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 COMMD10Q9Y6G5 202 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 THSD7BQ9C0I4 1608 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 A0A087WXM4 84 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.25■□□□□ 0.19
HOXD3-201ENST00000249440 DYTNA2CJ06 578 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 CBX4O00257 560 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 STX7O15400 261 aaKnown RBP16.25■□□□□ 0.19
HOXD3-201ENST00000249440 RASAL1O95294 804 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 RHOCP08134 193 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 MTHFD1P11586 935 aaKnown RBP16.25■□□□□ 0.19
HOXD3-201ENST00000249440 CASP2P42575 452 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 ZNF177Q13360 481 aaPredicted RBP16.25■□□□□ 0.19
HOXD3-201ENST00000249440 SLC36A3Q495N2 470 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 ATP6AP1LQ52LC2 224 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 ZRANB3Q5FWF4 1079 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 AARS2Q5JTZ9 985 aaKnown RBP16.25■□□□□ 0.19
HOXD3-201ENST00000249440 CTSL3PQ5NE16 218 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 SPRED1Q7Z699 444 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 DENND1CQ8IV53 801 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 FNDC5Q8NAU1 212 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 OR2T11Q8NH01 316 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 TMIGD2Q96BF3 282 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 ACOX2Q99424 681 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 TTLL2Q9BWV7 592 aa16.25■□□□□ 0.19
HOXD3-201ENST00000249440 FAM234BA2RU67 622 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 H7C4K7 107 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 TBC1D4O60343 1298 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms