RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 OR56A4Q8NGH8 313 aa19.33■□□□□ 0.69
CDC42EP1-201ENST00000249014 ZUFSPQ96AP4 578 aa19.33■□□□□ 0.69
CDC42EP1-201ENST00000249014 CREBZFQ9NS37 354 aa19.33■□□□□ 0.69
CDC42EP1-201ENST00000249014 VPS51Q9UID3 782 aa19.33■□□□□ 0.69
CDC42EP1-201ENST00000249014 TSR3Q9UJK0 312 aaKnown RBP19.33■□□□□ 0.69
CDC42EP1-201ENST00000249014 OR51B4Q9Y5P0 310 aa19.33■□□□□ 0.69
CDC42EP1-201ENST00000249014 KIF3CO14782 793 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 TNFAIP8O95379 198 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 ESR1P03372 595 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 CA5AP35218 305 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 UFM1P61960 85 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 SMAD3P84022 425 aaKnown RBP19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 RCAN2Q14206 197 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 C18orf21Q32NC0 220 aaPredicted RBP19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 INO80DQ53TQ3 878 aaPredicted RBP19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 AARS2Q5JTZ9 985 aaKnown RBP19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 GPRIN3Q6ZVF9 776 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 DEFB128Q7Z7B8 93 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 SPPL2CQ8IUH8 684 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 CHERPQ8IWX8 916 aaKnown RBP19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 NCSTNQ92542 709 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 BHMTQ93088 406 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 PPWD1Q96BP3 646 aaKnown RBP19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 TRMT2BQ96GJ1 504 aaKnown RBP19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 C1orf50Q9BV19 199 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 ZNF696Q9H7X3 374 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 ARMC1Q9NVT9 282 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 GID8Q9NWU2 228 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 PCDHA9Q9Y5H5 950 aa19.33■□□□□ 0.68
CDC42EP1-201ENST00000249014 A0A1W2PP18 115 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 H0YJX3 145 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 STAMBPO95630 424 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 FAM58BPP0C7Q3 252 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 MBL2P11226 248 aaPredicted RBP19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 ETS2P15036 469 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 CSKP41240 450 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 ERVPABLB-1P60509 514 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 COQ5Q5HYK3 327 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 PAGE3Q5JUK9 113 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 ZNF783Q6ZMS7 281 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 CDYL2Q8N8U2 506 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 OR6K2Q8NGY2 324 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 ADAMTS19Q8TE59 1207 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.32■□□□□ 0.688e-6■■□□□ 11.9
CDC42EP1-201ENST00000249014 PRPF18Q99633 342 aaKnown RBP19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 EFHD1Q9BUP0 239 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 PKP3Q9Y446 797 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 GREM1O60565 184 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 BAIAP3O94812 1187 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 CLPTM1O96005 669 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 CHEK2O96017 543 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 CKMT2P17540 419 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 HMGCLP35914 325 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 MRPL19P49406 292 aaKnown RBP19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 NAA20P61599 178 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 ROR2Q01974 943 aaKnown RBP19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 CACNG1Q06432 222 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 IRAK1BP1Q5VVH5 260 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 LETMD1Q6P1Q0 360 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 METTL25Q8N6Q8 603 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 ALG14Q96F25 216 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 GPR63Q9BZJ6 419 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 TM6SF2Q9BZW4 377 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 BRINP2Q9C0B6 783 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 CCM2LQ9NUG4 571 aaPredicted RBP19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 RNF11Q9Y3C5 154 aa19.32■□□□□ 0.68
CDC42EP1-201ENST00000249014 AKAP10O43572 662 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 KCNK10P57789 538 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 RABL3Q5HYI8 236 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 CWF19L1Q69YN2 538 aaKnown RBP19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 ERMP1Q7Z2K6 904 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 DNAJB7Q7Z6W7 309 aaPredicted RBP19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 CAMK1DQ8IU85 385 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 MYO1HQ8N1T3 1032 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 DNAJB14Q8TBM8 379 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 ZFAND2BQ8WV99 257 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 PIH1D2Q8WWB5 315 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 TMEM125Q96AQ2 219 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 CAPNS2Q96L46 248 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 ZNF382Q96SR6 550 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 TRIM4Q9C037 500 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 HSFX1Q9UBD0 423 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 DHRS7Q9Y394 339 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 COMMD10Q9Y6G5 202 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 OBSL1O75147 1896 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 ZFC3H1O60293 1989 aaKnown RBP19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 COL4A6Q14031 1691 aa19.31■□□□□ 0.68
CDC42EP1-201ENST00000249014 SCN8AQ9UQD0 1980 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 A0A1B0GTW7 788 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 GAPDHSO14556 408 aaPredicted RBP19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 ATP6V1B1P15313 513 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 PSMC3P17980 439 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 IL12AP29459 219 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 RPL5P46777 297 aaKnown RBP19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 GRIK2Q13002 908 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 NFYCQ13952 458 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 C6orf136Q5SQH8 315 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 LCN8Q6JVE9 175 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 Q6ZSR9 355 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 EFL1Q7Z2Z2 1120 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms