RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 MTMR11A4FU01 709 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 TBKBP1A7MCY6 615 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 PARNO95453 639 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 MLYCDO95822 493 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 HNRNPCP07910 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 TTPAP49638 278 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 HTR6P50406 440 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 PLD1Q13393 1074 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 ARHGEF7Q14155 803 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 AP5B1Q2VPB7 878 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 FAM162AQ96A26 154 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 CHID1Q9BWS9 393 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 ACTR3BQ9P1U1 418 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 FCF1Q9Y324 198 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 ZNF711Q9Y462 761 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 A0A1W2PP18 115 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 UROSP10746 265 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 NR4A1P22736 598 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 TRAF2Q12933 501 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 C11orf91Q3C1V1 193 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 NADSYN1Q6IA69 706 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 EFL1Q7Z2Z2 1120 aaKnown RBP12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 PCSK9Q8NBP7 692 aaKnown RBP12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 FAM81AQ8TBF8 368 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 FUBP1Q96AE4 644 aaKnown RBP12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 CDC14AQ9UNH5 594 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 U3KQV3 271 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 BRCA2P51587 3418 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 LCHNA4D1U4 455 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 AQP12BA6NM10 295 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 SNAP29O95721 258 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 SLC6A4P31645 630 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 SLC26A3P40879 764 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 RPS9P46781 194 aaKnown RBP12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 MAPKAPK2P49137 400 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 CSRP3P50461 194 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 CDH18Q13634 790 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 UGT3A2Q3SY77 523 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 TMTC4Q5T4D3 741 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 CST9Q5W186 159 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 BLOC1S3Q6QNY0 202 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 AQP12AQ8IXF9 295 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 TRPV3Q8NET8 790 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 MDGA1Q8NFP4 955 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 TNIP2Q8NFZ5 429 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 OR10Q1Q8NGQ4 319 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 ZBED2Q9BTP6 218 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 BDH2Q9BUT1 245 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 PAIP1Q9H074 479 aaKnown RBP12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 CRLS1Q9UJA2 301 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 TYW5A2RUC4 315 aaKnown RBP12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 VPS4BO75351 444 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 ESRRBO95718 433 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 FCGR1AP12314 374 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 STT3AP46977 705 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 OR4D2P58180 307 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 HMGCS1Q01581 520 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 MGAT3Q09327 533 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 GALNT1Q10472 559 aaPredicted RBP12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 TSTA3Q13630 321 aaPredicted RBP12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 AFMIDQ63HM1 303 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 NANOGP8Q6NSW7 305 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 PPP4R4Q6NUP7 873 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 FUT10Q6P4F1 479 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 ABRAXAS1Q6UWZ7 409 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 SCML4Q8N228 414 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 NANOGQ9H9S0 305 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 SDR39U1Q9NRG7 319 aaPredicted RBP12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 OLAHQ9NV23 265 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 EBF1Q9UH73 591 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 VPS9D1Q9Y2B5 631 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 ASB1Q9Y576 335 aa12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 NUP214P35658 2090 aaPredicted RBP12.48□□□□□ -0.41
RAB3IP-201ENST00000247833 WASH4PA8MWX3 477 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 AP1G1O43747 822 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 SEC22BO75396 215 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 OAZ2O95190 189 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 MBL2P11226 248 aaPredicted RBP12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 G6PDP11413 515 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 CKBP12277 381 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 CYBAP13498 195 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 KANK2Q63ZY3 851 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 RTN4RL1Q86UN2 441 aaPredicted RBP12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 DBF4BQ8NFT6 615 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 CIPCQ9C0C6 399 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 DERL2Q9GZP9 239 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 ASB8Q9H765 288 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 IPPKQ9H8X2 491 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 CXorf21Q9HAI6 301 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 SMPD3Q9NY59 655 aaPredicted RBP12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 SH3BGRLO75368 114 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 GSNP06396 782 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 UGT1A1P22309 533 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 UGT1A4P22310 534 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 UGT1A3P35503 534 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 UGT1A5P35504 534 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 AAK1Q2M2I8 961 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 RTP2Q5QGT7 225 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 C6orf136Q5SQH8 315 aa12.47□□□□□ -0.41
RAB3IP-201ENST00000247833 HECTD3Q5T447 861 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms