RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 SLC35F6Q8N357 371 aa15.97■□□□□ 0.15
CLPP-201ENST00000245816 USP7Q93009 1102 aa15.97■□□□□ 0.15
CLPP-201ENST00000245816 TMEM74Q96NL1 305 aa15.97■□□□□ 0.15
CLPP-201ENST00000245816 OR2M4Q96R27 311 aa15.97■□□□□ 0.15
CLPP-201ENST00000245816 GPR63Q9BZJ6 419 aa15.97■□□□□ 0.15
CLPP-201ENST00000245816 RMI1Q9H9A7 625 aa15.97■□□□□ 0.15
CLPP-201ENST00000245816 ARNT2Q9HBZ2 717 aa15.97■□□□□ 0.15
CLPP-201ENST00000245816 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.97■□□□□ 0.15
CLPP-201ENST00000245816 JRKLQ9Y4A0 524 aa15.97■□□□□ 0.15
CLPP-201ENST00000245816 SPO11Q9Y5K1 396 aa15.97■□□□□ 0.15
CLPP-201ENST00000245816 SDK2Q58EX2 2172 aa15.96■□□□□ 0.15
CLPP-201ENST00000245816 PSMD3O43242 534 aa15.96■□□□□ 0.15
CLPP-201ENST00000245816 FGF3P11487 239 aaPredicted RBP15.96■□□□□ 0.15
CLPP-201ENST00000245816 ADRA1AP35348 466 aa15.96■□□□□ 0.15
CLPP-201ENST00000245816 LY6DQ14210 128 aa15.96■□□□□ 0.15
CLPP-201ENST00000245816 P3H1Q32P28 736 aa15.96■□□□□ 0.15
CLPP-201ENST00000245816 KHDC1Q4VXA5 237 aaKnown RBP15.96■□□□□ 0.15
CLPP-201ENST00000245816 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.96■□□□□ 0.15
CLPP-201ENST00000245816 DRICH1Q6PGQ1 229 aaPredicted RBP15.96■□□□□ 0.15
CLPP-201ENST00000245816 DTX1Q86Y01 620 aa15.96■□□□□ 0.15
CLPP-201ENST00000245816 TRAM1L1Q8N609 369 aa15.96■□□□□ 0.15
CLPP-201ENST00000245816 LSM14AQ8ND56 463 aaKnown RBP15.96■□□□□ 0.15
CLPP-201ENST00000245816 IPMKQ8NFU5 416 aa15.96■□□□□ 0.15
CLPP-201ENST00000245816 SLC37A2Q8TED4 501 aa15.96■□□□□ 0.15
CLPP-201ENST00000245816 TBC1D29Q9UFV1 150 aa15.96■□□□□ 0.15
CLPP-201ENST00000245816 SLC23A2Q9UGH3 650 aa15.96■□□□□ 0.15
CLPP-201ENST00000245816 SHOC2Q9UQ13 582 aa15.96■□□□□ 0.15
CLPP-201ENST00000245816 BOD1L1Q8NFC6 3051 aa15.96■□□□□ 0.14
CLPP-201ENST00000245816 PRR19A6NJB7 356 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 NVLO15381 856 aaKnown RBP15.95■□□□□ 0.14
CLPP-201ENST00000245816 ZIC2O95409 532 aaPredicted RBP15.95■□□□□ 0.14
CLPP-201ENST00000245816 CPNE6O95741 557 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 PDE1BQ01064 536 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 EIF3IQ13347 325 aaKnown RBP15.95■□□□□ 0.14
CLPP-201ENST00000245816 SQSTM1Q13501 440 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 LRP8Q14114 963 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 OASLQ15646 514 aaKnown RBP15.95■□□□□ 0.14
CLPP-201ENST00000245816 LINC00303Q3SY05 128 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 JAMLQ86YT9 394 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 SFRP1Q8N474 314 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 EXD3Q8N9H8 876 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 CCDC110Q8TBZ0 833 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 CCDC74BQ96LY2 380 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 VPS35Q96QK1 796 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 GORASP1Q9BQQ3 440 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 TLR10Q9BXR5 811 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 C10orf88Q9H8K7 445 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 HOMER3Q9NSC5 361 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 SCHIP1Q9P0W5 487 aaPredicted RBP15.95■□□□□ 0.14
CLPP-201ENST00000245816 ATXN10Q9UBB4 475 aa15.95■□□□□ 0.14
CLPP-201ENST00000245816 TCRBV7S2A1N4TA0A589 114 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 ERI2A8K979 691 aaKnown RBP15.94■□□□□ 0.14
CLPP-201ENST00000245816 RHPN2P1A8MT19 583 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 TMX2-CTNND1H3BSU7 103 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 ERVH48-1M5A8F1 160 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 LIASO43766 372 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 ZNF8P17098 575 aaPredicted RBP15.94■□□□□ 0.14
CLPP-201ENST00000245816 BPIP17213 487 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 PSMB4P28070 264 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 LIMK2P53671 638 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 MAPK10P53779 464 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 CCNG2Q16589 344 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 PHF19Q5T6S3 580 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 BROXQ5VW32 411 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 KCTD11Q693B1 232 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 ARHGEF18Q6ZSZ5 1173 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 CHST15Q7LFX5 561 aaPredicted RBP15.94■□□□□ 0.14
CLPP-201ENST00000245816 VASH2Q86V25 355 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 PIM3Q86V86 326 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 TTC30BQ8N4P2 665 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 FAM71DQ8N9W8 422 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 BRSK1Q8TDC3 778 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 FAM118BQ9BPY3 351 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 TMEM121Q9BTD3 319 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 SPATA16Q9BXB7 569 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 STRADBQ9C0K7 418 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 TRIM39Q9HCM9 518 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 OCIAD1Q9NX40 245 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 IL17CQ9P0M4 197 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 PDP2Q9P2J9 529 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 KCNK6Q9Y257 313 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 DRG1Q9Y295 367 aaKnown RBP15.94■□□□□ 0.14
CLPP-201ENST00000245816 R3HDM2Q9Y2K5 976 aaKnown RBP15.94■□□□□ 0.14
CLPP-201ENST00000245816 PKP3Q9Y446 797 aa15.94■□□□□ 0.14
CLPP-201ENST00000245816 C2orf81A6NN90 581 aa15.93■□□□□ 0.14
CLPP-201ENST00000245816 ASMTLO95671 621 aa15.93■□□□□ 0.14
CLPP-201ENST00000245816 AGTP01019 485 aa15.93■□□□□ 0.14
CLPP-201ENST00000245816 CHRNA4P43681 627 aa15.93■□□□□ 0.14
CLPP-201ENST00000245816 GPR3P46089 330 aa15.93■□□□□ 0.14
CLPP-201ENST00000245816 FASLGP48023 281 aa15.93■□□□□ 0.14
CLPP-201ENST00000245816 UCNP55089 124 aa15.93■□□□□ 0.14
CLPP-201ENST00000245816 TAF1AQ15573 450 aaPredicted RBP15.93■□□□□ 0.14
CLPP-201ENST00000245816 MAP9Q49MG5 647 aa15.93■□□□□ 0.14
CLPP-201ENST00000245816 IYDQ6PHW0 289 aa15.93■□□□□ 0.14
CLPP-201ENST00000245816 C4orf22Q6V702 233 aa15.93■□□□□ 0.14
CLPP-201ENST00000245816 GLT6D1Q7Z4J2 308 aa15.93■□□□□ 0.14
CLPP-201ENST00000245816 ADGRG6Q86SQ4 1221 aa15.93■□□□□ 0.14
CLPP-201ENST00000245816 GALNT13Q8IUC8 556 aa15.93■□□□□ 0.14
CLPP-201ENST00000245816 SLC25A41Q8N5S1 370 aa15.93■□□□□ 0.14
CLPP-201ENST00000245816 GLYATL1Q969I3 302 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms