RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 FBXO27Q8NI29 283 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 POPDC2Q9HBU9 364 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 SMPD3Q9NY59 655 aaPredicted RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 RAB26Q9ULW5 256 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 VPS9D1Q9Y2B5 631 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 PEAK1Q9H792 1746 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 SAGE2PA6NJ88 616 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 CXCR6O00574 342 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 ZNF7P17097 686 aaPredicted RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 WASP42768 502 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 PSEN1P49768 467 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 TYSND1Q2T9J0 566 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 BANPQ8N9N5 519 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 TEX47Q8TBZ9 253 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 DOK4Q8TEW6 326 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 NANSQ9NR45 359 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 CCDC59Q9P031 241 aaKnown RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 UXTQ9UBK9 157 aaPredicted RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 MYH8P13535 1937 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 GLUD1P00367 558 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 APOBEC3HQ6NTF7 200 aaKnown RBP7.46□□□□□ -1.21
RIF1-201ENST00000243326 NODALQ96S42 347 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 KCTD3Q9Y597 815 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 IFNA14P01570 189 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 FNTBP49356 437 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 ALDH7A1P49419 539 aaKnown RBP7.46□□□□□ -1.21
RIF1-201ENST00000243326 GFOD2Q3B7J2 385 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 SNAP47Q5SQN1 464 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 NCCRP1Q6ZVX7 275 aaPredicted RBP7.46□□□□□ -1.21
RIF1-201ENST00000243326 LINGO2Q7L985 606 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 STK40Q8N2I9 435 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 TTYH3Q9C0H2 523 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 SPATC1LQ9H0A9 340 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 TVP23BQ9NYZ1 205 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 IFT80Q9P2H3 777 aaPredicted RBP7.46□□□□□ -1.21
RIF1-201ENST00000243326 UPK3BL1B0FP48 263 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 UPK3BL2E5RIL1 263 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 PAEPP09466 180 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 ACLYP53396 1101 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 PPP1R3AQ16821 1122 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 CLEC12AQ5QGZ9 265 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 SMARCD3Q6STE5 483 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 FAM124AQ86V42 546 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 TMEM192Q8IY95 271 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 ZNF398Q8TD17 642 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 SMARCD1Q96GM5 515 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 CCDC120Q96HB5 630 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 ITCHQ96J02 903 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 ZDHHC2Q9UIJ5 367 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 GPSM3Q9Y4H4 160 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 PCDHGA4Q9Y5G9 962 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 C12orf71A8MTZ7 269 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 MFSD10Q14728 455 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 ATXN7L3Q14CW9 347 aaPredicted RBP7.46□□□□□ -1.21
RIF1-201ENST00000243326 SLC30A6Q6NXT4 461 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 FAM217AQ8IXS0 508 aa7.46□□□□□ -1.21
RIF1-201ENST00000243326 TRAV6A0A075B6T7 132 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 CD36P16671 472 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 WNT8BQ93098 351 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 GLT1D1Q96MS3 346 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 ZDHHC15Q96MV8 337 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 CSPG4P5Q96PW8 444 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 COLEC11Q9BWP8 271 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 PABPC1P11940 636 aaKnown RBP7.46□□□□□ -1.22
RIF1-201ENST00000243326 MYL9P24844 172 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 UGT2B15P54855 530 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 GPX6P59796 221 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 GK3PQ14409 553 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 ZNF697Q5TEC3 545 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 CERS5Q8N5B7 392 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 BOLLQ8N9W6 283 aaKnown RBP7.46□□□□□ -1.22
RIF1-201ENST00000243326 OR4K2Q8NGD2 314 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 MKL1Q969V6 931 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 ABCA7Q8IZY2 2146 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 RBAK-RBAKDNI3L0D1 243 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 I3L521 148 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 FESP07332 822 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 CLCN5P51795 746 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 ZNF280DQ6N043 979 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 TATDN1Q6P1N9 297 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 TMPRSS11BQ86T26 416 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 LEMD2Q8NC56 503 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 TRPV3Q8NET8 790 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 OR4L1Q8NH43 312 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 PPP1R2P1Q96PQ5 205 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 WRAP73Q9P2S5 460 aaPredicted RBP7.46□□□□□ -1.22
RIF1-201ENST00000243326 ZNF451Q9Y4E5 1061 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 OR2AG2A6NM03 316 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 BTNL10A8MVZ5 291 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 MAD2L1Q13257 205 aaPredicted RBP7.46□□□□□ -1.22
RIF1-201ENST00000243326 KHDRBS2Q5VWX1 349 aaKnown RBP7.46□□□□□ -1.22
RIF1-201ENST00000243326 FAM171BQ6P995 826 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 SMYD1Q8NB12 490 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 CANT1Q8WVQ1 401 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 C19orf81C9J6K1 198 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 ARPC2O15144 300 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 IL1R2P27930 398 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 SLC2A7Q6PXP3 512 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 MEIOBQ8N635 442 aa7.46□□□□□ -1.22
RIF1-201ENST00000243326 WACQ9BTA9 647 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms