RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ZNF648Q5T619 568 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-201ENST00000242776 IYDQ6PHW0 289 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 PEX26Q7Z412 305 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 ARFGAP1Q8N6T3 406 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 LRRC57Q8N9N7 239 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 GALNT11Q8NCW6 608 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 SH3KBP1Q96B97 665 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 OSGEPL1Q9H4B0 414 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 ETNK2Q9NVF9 386 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 SIDT1Q9NXL6 827 aaKnown RBP13.62□□□□□ -0.23
DDX39A-201ENST00000242776 CWC15Q9P013 229 aaKnown RBP13.62□□□□□ -0.23
DDX39A-201ENST00000242776 ALG6Q9Y672 507 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 A0A1W2PQ67 120 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 A6NCN8 305 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 PSTPIP1O43586 416 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 DNAJC6O75061 913 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 CREG1O75629 220 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 TEAD1P28347 426 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 LEPRP48357 1165 aaKnown RBP13.61□□□□□ -0.23
DDX39A-201ENST00000242776 PMS2P54278 862 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 EPHB1P54762 984 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 RPS18P62269 152 aaKnown RBP13.61□□□□□ -0.23
DDX39A-201ENST00000242776 MRPL49Q13405 166 aaKnown RBP13.61□□□□□ -0.23
DDX39A-201ENST00000242776 LRP8Q14114 963 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 CPZQ66K79 652 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 PLXDC1Q8IUK5 500 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 C17orf53Q8N3J3 647 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-201ENST00000242776 CT55Q8WUE5 264 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 PIH1D2Q8WWB5 315 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 C9orf72Q96LT7 481 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 NT5MQ9NPB1 228 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 OGFRQ9NZT2 677 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 CPNE7Q9UBL6 633 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.61□□□□□ -0.23
DDX39A-201ENST00000242776 ITPR2Q14571 2701 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 MIF4GDA9UHW6 222 aaKnown RBP13.61□□□□□ -0.23
DDX39A-201ENST00000242776 KIF1CO43896 1103 aaKnown RBP13.61□□□□□ -0.23
DDX39A-201ENST00000242776 PEX11BO96011 259 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 AMD1P17707 334 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 MIPP30301 263 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 CCL11P51671 97 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 DNASE1L3Q13609 305 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 MAP7Q14244 749 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 SEPT7Q16181 437 aaKnown RBP13.61□□□□□ -0.23
DDX39A-201ENST00000242776 SMTNL2Q2TAL5 461 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 CRTC2Q53ET0 693 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-201ENST00000242776 ODF2Q5BJF6 829 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 ZNF569Q5MCW4 686 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 POLNQ7Z5Q5 900 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 RHOT1Q8IXI2 618 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 BBS5Q8N3I7 341 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 UBL4BQ8N7F7 174 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 EXD1Q8NHP7 514 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 PRR7Q8TB68 274 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 MCCC1Q96RQ3 725 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-201ENST00000242776 MGME1Q9BQP7 344 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 MFRPQ9BY79 579 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-201ENST00000242776 KCND3Q9UK17 655 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 TTLL3Q9Y4R7 772 aa13.61□□□□□ -0.23
DDX39A-201ENST00000242776 CENPEQ02224 2701 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 CCDC66A2RUB6 948 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 MAFKO60675 156 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 TIAF1O95411 115 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 CLDN7O95471 211 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 FTCDO95954 541 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 CCNYL3P0C7X3 344 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 F3P13726 295 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 GJC1P36383 396 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 MMP13P45452 471 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 PGDP52209 483 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 EPHA4P54764 986 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 GNG11P61952 73 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 SLC25A11Q02978 314 aaKnown RBP13.6□□□□□ -0.23
DDX39A-201ENST00000242776 DPYSQ14117 519 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 BOLA3Q53S33 107 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 ZFYVE27Q5T4F4 411 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 LRRC38Q5VT99 294 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 FAM199XQ6PEV8 388 aaPredicted RBP13.6□□□□□ -0.23
DDX39A-201ENST00000242776 CRTC3Q6UUV7 619 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 FAM92BQ6ZTR7 304 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 CYP4V2Q6ZWL3 525 aaPredicted RBP13.6□□□□□ -0.23
DDX39A-201ENST00000242776 LYSMD3Q7Z3D4 306 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 NT5DC3Q86UY8 548 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 PSTKQ8IV42 348 aaKnown RBP13.6□□□□□ -0.23
DDX39A-201ENST00000242776 TRIM48Q8IWZ4 208 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 SLC35F6Q8N357 371 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 TTC30BQ8N4P2 665 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 ATPAF2Q8N5M1 289 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 NSMCE1Q8WV22 266 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 TEKT4Q8WW24 435 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 HSPH1Q92598 858 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 COX14Q96I36 57 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 ZNF599Q96NL3 588 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 PLEKHG4BQ96PX9 1271 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 HERPUD2Q9BSE4 406 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 GOLPH3Q9H4A6 298 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 ACTL8Q9H568 366 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 KLC4Q9NSK0 619 aa13.6□□□□□ -0.23
DDX39A-201ENST00000242776 DDX56Q9NY93 547 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms