RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 RHOJQ9H4E5 214 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 BARX1Q9HBU1 254 aaPredicted RBP7.9□□□□□ -1.14
CXCR4-201ENST00000241393 MRM3Q9HC36 420 aaKnown RBP7.9□□□□□ -1.14
CXCR4-201ENST00000241393 COX16Q9P0S2 106 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 FNIP2Q9P278 1114 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 SLC7A8Q9UHI5 535 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 AAR2Q9Y312 384 aaKnown RBP7.9□□□□□ -1.14
CXCR4-201ENST00000241393 A0A096LPK6 155 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 MYBPHLA2RUH7 354 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ARHGAP42A6NI28 874 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 SLCO1B7G3V0H7 640 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 I6L893 689 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 TRIM13O60858 407 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ZNF623O75123 536 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 CABYRO75952 493 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ANXA9O76027 345 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 TSPAN15O95858 294 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 SCGB1D2O95969 90 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 TOP3BO95985 862 aaKnown RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 IGLV3-25P01717 112 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 C2P06681 752 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 PI3P19957 117 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 CCNCP24863 283 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ADSLP30566 484 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 RGS2P41220 211 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 IRX4P78413 519 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 KDSRQ06136 332 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ASPHQ12797 758 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 EIF4EBP2Q13542 120 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ITGA9Q13797 1035 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 GSTA3Q16772 222 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 PRAMEF19Q5SWL8 479 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 FAM182AQ5T1J6 154 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 NXNQ6DKJ4 435 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 FAM171BQ6P995 826 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 KCNMB4Q86W47 210 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 METTL23Q86XA0 190 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 CNTN4Q8IWV2 1026 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 MYO1HQ8N1T3 1032 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ZSCAN18Q8TBC5 510 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 URGCPQ8TCY9 931 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ACTRT2Q8TDY3 377 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 LPPQ93052 612 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 FAM136AQ96C01 138 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 WDR92Q96MX6 357 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 FCRL5Q96RD9 977 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 HAPLN3Q96S86 360 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 THTPAQ9BU02 230 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 TMEM168Q9H0V1 697 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 NMRAL1Q9HBL8 299 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 DMAP1Q9NPF5 467 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ANLNQ9NQW6 1124 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ARHGEF38Q9NXL2 777 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 SLC17A6Q9P2U8 582 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 OR12D3Q9UGF7 316 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 A0A088AWK7 358 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 F5H423 210 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 G3V2L1 256 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 DUSP11O75319 330 aaKnown RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 LYPLA1O75608 230 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 AKR1A1P14550 325 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 CPA2P48052 419 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 CLCNKBP51801 687 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 MXRA7P84157 204 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 MEF2AQ02078 507 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ILF2Q12905 390 aaKnown RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ZBTB17Q13105 803 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 UPP1Q16831 310 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 HSP90AA5PQ58FG0 334 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 PCID2Q5JVF3 399 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 C1orf146Q5VVC0 180 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 CAPRIN2Q6IMN6 1127 aaKnown RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ANO7Q6IWH7 933 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 EPGNQ6UW88 154 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 UNQ6494/PRO21346Q6UXR6 183 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ZYG11AQ6WRX3 759 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 GPRIN1Q7Z2K8 1008 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 MAVSQ7Z434 540 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 CMC1Q7Z7K0 106 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 SETD3Q86TU7 594 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 TAC4Q86UU9 113 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 CMTR2Q8IYT2 770 aaKnown RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 MYLPFQ96A32 169 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 VPS39Q96JC1 886 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 CNDP1Q96KN2 507 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 C8orf48Q96LL4 319 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 UROC1Q96N76 676 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 TSNARE1Q96NA8 513 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 AGAP3Q96P47 875 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 PANX3Q96QZ0 392 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 GAD1Q99259 594 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 IL12RB2Q99665 862 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ZNF184Q99676 751 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 MTG1Q9BT17 334 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 CCDC28BQ9BUN5 200 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 TKTL2Q9H0I9 626 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 VCXQ9H320 206 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 CATSPERBQ9H7T0 1116 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 C20orf96Q9NUD7 363 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 MRGBPQ9NV56 204 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms