RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 UGT1A4P22310 534 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 UGT1A3P35503 534 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 UGT1A5P35504 534 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 CDC16Q13042 620 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 CBX2Q14781 532 aaPredicted RBP23.01■■□□□ 1.27
MSX2-201ENST00000239243 TGFBIQ15582 683 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 SWT1Q5T5J6 900 aaKnown RBP23.01■■□□□ 1.27
MSX2-201ENST00000239243 ICE2Q659A1 982 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 MYO1HQ8N1T3 1032 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 ZNF483Q8TF39 744 aaPredicted RBP23.01■■□□□ 1.27
MSX2-201ENST00000239243 SMG7Q92540 1137 aaKnown RBP23.01■■□□□ 1.27
MSX2-201ENST00000239243 CDH22Q9UJ99 828 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 PRPF19Q9UMS4 504 aaKnown RBP23.01■■□□□ 1.27
MSX2-201ENST00000239243 DNAJC15Q9Y5T4 150 aa23.01■■□□□ 1.27
MSX2-201ENST00000239243 NUP210Q8TEM1 1887 aaPredicted RBP23■■□□□ 1.27
MSX2-201ENST00000239243 LRRC14BA6NHZ5 514 aa23■■□□□ 1.27
MSX2-201ENST00000239243 H0Y3Z8 333 aa23■■□□□ 1.27
MSX2-201ENST00000239243 GIPC1O14908 333 aa23■■□□□ 1.27
MSX2-201ENST00000239243 ASLP04424 464 aa23■■□□□ 1.27
MSX2-201ENST00000239243 CA3P07451 260 aa23■■□□□ 1.27
MSX2-201ENST00000239243 ZNF30P17039 623 aa23■■□□□ 1.27
MSX2-201ENST00000239243 NUDT2P50583 147 aa23■■□□□ 1.27
MSX2-201ENST00000239243 ATP4BP51164 291 aa23■■□□□ 1.27
MSX2-201ENST00000239243 PTSQ03393 145 aa23■■□□□ 1.27
MSX2-201ENST00000239243 TBL3Q12788 808 aaKnown RBP23■■□□□ 1.27
MSX2-201ENST00000239243 PGM2L1Q6PCE3 622 aa23■■□□□ 1.27
MSX2-201ENST00000239243 RIPOR1Q6ZS17 1223 aa23■■□□□ 1.27
MSX2-201ENST00000239243 LARP4Q71RC2 724 aaKnown RBP eCLIP23■■□□□ 1.27
MSX2-201ENST00000239243 NAT16Q8N8M0 369 aa23■■□□□ 1.27
MSX2-201ENST00000239243 CHST14Q8NCH0 376 aa23■■□□□ 1.27
MSX2-201ENST00000239243 WFIKKN2Q8TEU8 576 aa23■■□□□ 1.27
MSX2-201ENST00000239243 TWIST2Q8WVJ9 160 aa23■■□□□ 1.27
MSX2-201ENST00000239243 MARK4Q96L34 752 aa23■■□□□ 1.27
MSX2-201ENST00000239243 KLHL32Q96NJ5 620 aa23■■□□□ 1.27
MSX2-201ENST00000239243 NSUN5Q96P11 429 aaKnown RBP23■■□□□ 1.27
MSX2-201ENST00000239243 EFCAB1Q9HAE3 211 aa23■■□□□ 1.27
MSX2-201ENST00000239243 ZDHHC3Q9NYG2 299 aa23■■□□□ 1.27
MSX2-201ENST00000239243 STOML1Q9UBI4 398 aa23■■□□□ 1.27
MSX2-201ENST00000239243 FBXO10Q9UK96 956 aa23■■□□□ 1.27
MSX2-201ENST00000239243 PCTPQ9UKL6 214 aa23■■□□□ 1.27
MSX2-201ENST00000239243 NCF1BA6NI72 391 aaPredicted RBP23■■□□□ 1.27
MSX2-201ENST00000239243 NCF1CA8MVU1 366 aaPredicted RBP23■■□□□ 1.27
MSX2-201ENST00000239243 AIM2O14862 343 aa23■■□□□ 1.27
MSX2-201ENST00000239243 CRCPO75575 148 aa23■■□□□ 1.27
MSX2-201ENST00000239243 SLC25A14O95258 325 aaPredicted RBP23■■□□□ 1.27
MSX2-201ENST00000239243 S100BP04271 92 aaPredicted RBP23■■□□□ 1.27
MSX2-201ENST00000239243 CYP2A6P11509 494 aaPredicted RBP23■■□□□ 1.27
MSX2-201ENST00000239243 NCF1P14598 390 aaPredicted RBP23■■□□□ 1.27
MSX2-201ENST00000239243 DHCR24Q15392 516 aa23■■□□□ 1.27
MSX2-201ENST00000239243 TTLL9Q3SXZ7 439 aa23■■□□□ 1.27
MSX2-201ENST00000239243 TMEM215Q68D42 235 aa23■■□□□ 1.27
MSX2-201ENST00000239243 RBM23Q86U06 439 aaKnown RBP23■■□□□ 1.27
MSX2-201ENST00000239243 PANX3Q96QZ0 392 aa23■■□□□ 1.27
MSX2-201ENST00000239243 PFDN4Q9NQP4 134 aa23■■□□□ 1.27
MSX2-201ENST00000239243 DUS2Q9NX74 493 aaKnown RBP23■■□□□ 1.27
MSX2-201ENST00000239243 TNPO3Q9Y5L0 923 aaKnown RBP23■■□□□ 1.27
MSX2-201ENST00000239243 ADH1CP00326 375 aa22.99■■□□□ 1.27
MSX2-201ENST00000239243 SRPRAP08240 638 aaKnown RBP22.99■■□□□ 1.27
MSX2-201ENST00000239243 LHCGRP22888 699 aa22.99■■□□□ 1.27
MSX2-201ENST00000239243 CCNG1P51959 295 aa22.99■■□□□ 1.27
MSX2-201ENST00000239243 ARHGEF7Q14155 803 aa22.99■■□□□ 1.27
MSX2-201ENST00000239243 CCDC6Q16204 474 aa22.99■■□□□ 1.27
MSX2-201ENST00000239243 OR56A4Q8NGH8 313 aa22.99■■□□□ 1.27
MSX2-201ENST00000239243 SERPINI1Q99574 410 aa22.99■■□□□ 1.27
MSX2-201ENST00000239243 NUSAP1Q9BXS6 441 aaKnown RBP22.99■■□□□ 1.27
MSX2-201ENST00000239243 SEMA4BQ9NPR2 832 aaPredicted RBP22.99■■□□□ 1.27
MSX2-201ENST00000239243 PKD2L2Q9NZM6 624 aa22.99■■□□□ 1.27
MSX2-201ENST00000239243 B4GALT6Q9UBX8 382 aa22.99■■□□□ 1.27
MSX2-201ENST00000239243 VPS4BO75351 444 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 ADH5P11766 374 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 GNAZP19086 355 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 DGKGP49619 791 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 HK3P52790 923 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 IRX1P78414 480 aaPredicted RBP22.98■■□□□ 1.27
MSX2-201ENST00000239243 RCN1Q15293 331 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 ZBTB2Q8N680 514 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 ITFG1Q8TB96 612 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 FRS2Q8WU20 508 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 OSCP1Q8WVF1 389 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 LRIG1Q96JA1 1093 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 MRGPRX3Q96LB0 322 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 ANKRD27Q96NW4 1050 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 COPS8Q99627 209 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 LATS2Q9NRM7 1088 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 SPATS2LQ9NUQ6 558 aaKnown RBP22.98■■□□□ 1.27
MSX2-201ENST00000239243 KLHL42Q9P2K6 505 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 RAD51BO15315 384 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 HOXC11O43248 304 aaPredicted RBP22.98■■□□□ 1.27
MSX2-201ENST00000239243 TRIM16O95361 564 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 STX1BP61266 288 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 ERVK-21P61565 698 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 STX5Q13190 355 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 CYHR1Q6ZMK1 362 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 CLDN19Q8N6F1 224 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 HGH1Q9BTY7 390 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 FAM126AQ9BYI3 521 aaPredicted RBP22.98■■□□□ 1.27
MSX2-201ENST00000239243 STX18Q9P2W9 335 aaKnown RBP22.98■■□□□ 1.27
MSX2-201ENST00000239243 PRSS21Q9Y6M0 314 aa22.98■■□□□ 1.27
MSX2-201ENST00000239243 PPP6CO00743 305 aa22.97■■□□□ 1.27
MSX2-201ENST00000239243 ESRRBO95718 433 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms