RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 SH3BP1Q9Y3L3 701 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 TYW5A2RUC4 315 aaKnown RBP20.4■□□□□ 0.86
SNX3-201ENST00000230085 CCL16O15467 120 aa20.4■□□□□ 0.86
SNX3-201ENST00000230085 KCNA5P22460 613 aa20.4■□□□□ 0.86
SNX3-201ENST00000230085 ZNF460Q14592 562 aa20.4■□□□□ 0.86
SNX3-201ENST00000230085 PPP1R3AQ16821 1122 aa20.4■□□□□ 0.86
SNX3-201ENST00000230085 NEPROQ6NW34 567 aa20.4■□□□□ 0.86
SNX3-201ENST00000230085 LRRC49Q8IUZ0 686 aa20.4■□□□□ 0.86
SNX3-201ENST00000230085 TBC1D21Q8IYX1 336 aa20.4■□□□□ 0.86
SNX3-201ENST00000230085 TRUB1Q8WWH5 349 aaKnown RBP20.4■□□□□ 0.86
SNX3-201ENST00000230085 NDRG1Q92597 394 aaKnown RBP20.4■□□□□ 0.86
SNX3-201ENST00000230085 FATE1Q969F0 183 aa20.4■□□□□ 0.86
SNX3-201ENST00000230085 C19orf60Q96EN9 201 aa20.4■□□□□ 0.86
SNX3-201ENST00000230085 SMARCD1Q96GM5 515 aa20.4■□□□□ 0.86
SNX3-201ENST00000230085 SLC52A3Q9NQ40 469 aa20.4■□□□□ 0.86
SNX3-201ENST00000230085 SDR39U1Q9NRG7 319 aaPredicted RBP20.4■□□□□ 0.86
SNX3-201ENST00000230085 INTS10Q9NVR2 710 aaKnown RBP20.4■□□□□ 0.86
SNX3-201ENST00000230085 PAIP2BQ9ULR5 123 aaKnown RBP20.4■□□□□ 0.86
SNX3-201ENST00000230085 CDC14AQ9UNH5 594 aa20.4■□□□□ 0.86
SNX3-201ENST00000230085 NEU3Q9UQ49 428 aa20.4■□□□□ 0.86
SNX3-201ENST00000230085 VPS4BO75351 444 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 LRIG2O94898 1065 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 ESRRBO95718 433 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 GNAO1P09471 354 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 GFAPP14136 432 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 SAT1P21673 171 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 MAGEA11P43364 429 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 MAP3K7CLP57077 242 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 NAA20P61599 178 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 ADARB1P78563 741 aaKnown RBP20.39■□□□□ 0.86
SNX3-201ENST00000230085 RAB39AQ14964 217 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 ZNF678Q5SXM1 525 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 CCNYL2Q5T2Q4 361 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 DCDC5Q6ZRR9 648 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 PTAR1Q7Z6K3 402 aaPredicted RBP20.39■□□□□ 0.86
SNX3-201ENST00000230085 PHYKPLQ8IUZ5 450 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 ZMIZ2Q8NF64 920 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 GIPC2Q8TF65 315 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 THAP11Q96EK4 314 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 SMOQ99835 787 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 SFXN1Q9H9B4 322 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 ATP13A1Q9HD20 1204 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 DZANK1Q9NVP4 752 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 SMPD3Q9NY59 655 aaPredicted RBP20.39■□□□□ 0.86
SNX3-201ENST00000230085 OR12D3Q9UGF7 316 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 PCDHA9Q9Y5H5 950 aa20.39■□□□□ 0.86
SNX3-201ENST00000230085 GRXCR2A6NFK2 248 aa20.39■□□□□ 0.85
SNX3-201ENST00000230085 TTC36A6NLP5 189 aa20.39■□□□□ 0.85
SNX3-201ENST00000230085 H3BQ06 376 aaPredicted RBP20.39■□□□□ 0.85
SNX3-201ENST00000230085 LRG1P02750 347 aa20.39■□□□□ 0.85
SNX3-201ENST00000230085 ALDOCP09972 364 aaKnown RBP20.39■□□□□ 0.85
SNX3-201ENST00000230085 SLC6A2P23975 617 aa20.39■□□□□ 0.85
SNX3-201ENST00000230085 CYBRD1Q53TN4 286 aa20.39■□□□□ 0.85
SNX3-201ENST00000230085 ZNF470Q6ECI4 717 aa20.39■□□□□ 0.85
SNX3-201ENST00000230085 OGFOD2Q6N063 350 aa20.39■□□□□ 0.85
SNX3-201ENST00000230085 RTL10Q7L3V2 364 aa20.39■□□□□ 0.85
SNX3-201ENST00000230085 DDHD1Q8NEL9 900 aa20.39■□□□□ 0.85
SNX3-201ENST00000230085 OR13F1Q8NGS4 319 aa20.39■□□□□ 0.85
SNX3-201ENST00000230085 PLEKHA8Q96JA3 519 aa20.39■□□□□ 0.85
SNX3-201ENST00000230085 MSLNLQ96KJ4 702 aa20.39■□□□□ 0.85
SNX3-201ENST00000230085 ULBP1Q9BZM6 244 aa20.39■□□□□ 0.85
SNX3-201ENST00000230085 GPN2Q9H9Y4 310 aaPredicted RBP20.39■□□□□ 0.85
SNX3-201ENST00000230085 ARHGEF38Q9NXL2 777 aa20.39■□□□□ 0.85
SNX3-201ENST00000230085 A0A0J9YYE9 177 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 TCRBV5S2A0A599 114 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 CCDC78A2IDD5 438 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 MATN3O15232 486 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 HDCP19113 662 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 HERVK_113P63132 956 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 PMS2P3Q13401 168 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 EIF4EBP2Q13542 120 aaPredicted RBP20.38■□□□□ 0.85
SNX3-201ENST00000230085 TGFBIQ15582 683 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 FKBP9P1Q75LS8 142 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 OTOP3Q7RTS5 596 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 BHLHA9Q7RTU4 235 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 DHRSXQ8N5I4 330 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 ZNF707Q96C28 371 aaPredicted RBP20.38■□□□□ 0.85
SNX3-201ENST00000230085 ERVK-6Q9BXR3 956 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 UBE2ZQ9H832 354 aaPredicted RBP20.38■□□□□ 0.85
SNX3-201ENST00000230085 CSNK1G1Q9HCP0 422 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 OSER1Q9NX31 292 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 FADS3Q9Y5Q0 445 aa20.38■□□□□ 0.85
SNX3-201ENST00000230085 NEMP2A6NFY4 417 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 YJEFN3A6XGL0 299 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 UBFD1O14562 309 aaKnown RBP20.37■□□□□ 0.85
SNX3-201ENST00000230085 CLOCKO15516 846 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 FGF10O15520 208 aaPredicted RBP20.37■□□□□ 0.85
SNX3-201ENST00000230085 SERPINB7O75635 380 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 NPPAP01160 153 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 HOXA9P31269 272 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 SLC5A3P53794 718 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 RELAQ04206 551 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 CSHL1Q14406 222 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 ARHGAP12Q8IWW6 846 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 MIER2Q8N344 545 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 HLA-CQ95604 372 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 OLFM1Q99784 485 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 TRIM62Q9BVG3 475 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 S1PR5Q9H228 398 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 POPDC3Q9HBV1 291 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms