RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 OR2M4Q96R27 311 aa17.84■□□□□ 0.45
PFN1-201ENST00000225655 CMKLR1Q99788 373 aa17.84■□□□□ 0.45
PFN1-201ENST00000225655 RIOK2Q9BVS4 552 aaKnown RBP17.84■□□□□ 0.45
PFN1-201ENST00000225655 DDX47Q9H0S4 455 aaKnown RBP17.84■□□□□ 0.45
PFN1-201ENST00000225655 RAB6BQ9NRW1 208 aa17.84■□□□□ 0.45
PFN1-201ENST00000225655 PISDQ9UG56 409 aa17.84■□□□□ 0.45
PFN1-201ENST00000225655 PCYOX1Q9UHG3 505 aa17.84■□□□□ 0.45
PFN1-201ENST00000225655 TMEM98Q9Y2Y6 226 aa17.84■□□□□ 0.45
PFN1-201ENST00000225655 K7ENP7 123 aa17.83■□□□□ 0.44
PFN1-201ENST00000225655 HLA-DPA1P20036 260 aa17.83■□□□□ 0.44
PFN1-201ENST00000225655 BASP1P80723 227 aaKnown RBP17.83■□□□□ 0.44
PFN1-201ENST00000225655 LRP8Q14114 963 aa17.83■□□□□ 0.44
PFN1-201ENST00000225655 DHX34Q14147 1143 aaKnown RBP17.83■□□□□ 0.44
PFN1-201ENST00000225655 MAP9Q49MG5 647 aa17.83■□□□□ 0.44
PFN1-201ENST00000225655 PYCR3Q53H96 274 aa17.83■□□□□ 0.44
PFN1-201ENST00000225655 INO80CQ6PI98 192 aaPredicted RBP17.83■□□□□ 0.44
PFN1-201ENST00000225655 KDELC2Q7Z4H8 507 aa17.83■□□□□ 0.44
PFN1-201ENST00000225655 LINC00523Q86TU6 105 aa17.83■□□□□ 0.44
PFN1-201ENST00000225655 TRIM74Q86UV6 250 aa17.83■□□□□ 0.44
PFN1-201ENST00000225655 PIM3Q86V86 326 aa17.83■□□□□ 0.44
PFN1-201ENST00000225655 NAGSQ8N159 534 aa17.83■□□□□ 0.44
PFN1-201ENST00000225655 SPATA4Q8NEY3 305 aa17.83■□□□□ 0.44
PFN1-201ENST00000225655 SLCO2A1Q92959 643 aa17.83■□□□□ 0.44
PFN1-201ENST00000225655 OXNAD1Q96HP4 312 aaPredicted RBP17.83■□□□□ 0.44
PFN1-201ENST00000225655 AGAP2Q99490 1192 aa17.83■□□□□ 0.44
PFN1-201ENST00000225655 SEMA6CQ9H3T2 930 aa17.83■□□□□ 0.44
PFN1-201ENST00000225655 AHCTF1Q8WYP5 2266 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 C1orf232A0A0U1RR37 186 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 CLDN7O95471 211 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 ALDH4A1P30038 563 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 RPL22P35268 128 aaKnown RBP17.82■□□□□ 0.44
PFN1-201ENST00000225655 ACTR1BP42025 376 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 OR1D5P58170 312 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 ACTR1AP61163 376 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 QPCTQ16769 361 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 PHF19Q5T6S3 580 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 KDELC1Q6UW63 502 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 CCDC81Q6ZN84 652 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 MAATS1Q7Z4T9 603 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 GALNT13Q8IUC8 556 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 PATE1Q8WXA2 126 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 CCNL2Q96S94 520 aaPredicted RBP17.82■□□□□ 0.44
PFN1-201ENST00000225655 MLPHQ9BV36 600 aaPredicted RBP17.82■□□□□ 0.44
PFN1-201ENST00000225655 FICDQ9BVA6 458 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 RDH14Q9HBH5 336 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 VPS18Q9P253 973 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 ASIC3Q9UHC3 531 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 PLEKHM1Q9Y4G2 1056 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 MRFAP1Q9Y605 127 aa17.82■□□□□ 0.44
PFN1-201ENST00000225655 RGSL1A5PLK6 1076 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 ANKRD66B4E2M5 251 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 AP3B1O00203 1094 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 NDC80O14777 642 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 INPP4BO15327 924 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 METTL18O95568 372 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 AP2A1O95782 977 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 ETS1P14921 441 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 ITIH1P19827 911 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 CD1CP29017 333 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 SPINT3P49223 89 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 SARNPP82979 210 aaKnown RBP17.81■□□□□ 0.44
PFN1-201ENST00000225655 GPS1Q13098 491 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 BIRC2Q13490 618 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 SQSTM1Q13501 440 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 SEMA5AQ13591 1074 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 GALNT3Q14435 633 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 TRIP13Q15645 432 aaPredicted RBP17.81■□□□□ 0.44
PFN1-201ENST00000225655 AMZ1Q400G9 498 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 TAF1BQ53T94 588 aaPredicted RBP17.81■□□□□ 0.44
PFN1-201ENST00000225655 HENMT1Q5T8I9 393 aaKnown RBP17.81■□□□□ 0.44
PFN1-201ENST00000225655 MARK2Q7KZI7 788 aaKnown RBP17.81■□□□□ 0.44
PFN1-201ENST00000225655 ZNF572Q7Z3I7 529 aaPredicted RBP17.81■□□□□ 0.44
PFN1-201ENST00000225655 TAB3Q8N5C8 712 aaPredicted RBP17.81■□□□□ 0.44
PFN1-201ENST00000225655 CEP112Q8N8E3 955 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 MRGPRX2Q96LB1 330 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 KRT12Q99456 494 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 TBL1YQ9BQ87 522 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 B3GNT4Q9C0J1 378 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 ETNK1Q9HBU6 452 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 EIF2B3Q9NR50 452 aaKnown RBP17.81■□□□□ 0.44
PFN1-201ENST00000225655 HACD3Q9P035 362 aa17.81■□□□□ 0.44
PFN1-201ENST00000225655 CNOT6Q9ULM6 557 aaKnown RBP17.81■□□□□ 0.44
PFN1-201ENST00000225655 GCN1Q92616 2671 aaKnown RBP17.81■□□□□ 0.44
PFN1-201ENST00000225655 KALRNO60229 2985 aa17.8■□□□□ 0.44
PFN1-201ENST00000225655 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.8■□□□□ 0.44
PFN1-201ENST00000225655 LOC285095A0A1B0GVY8 99 aa17.8■□□□□ 0.44
PFN1-201ENST00000225655 CTAGE15A4D2H0 777 aa17.8■□□□□ 0.44
PFN1-201ENST00000225655 HGSO14964 777 aaPredicted RBP17.8■□□□□ 0.44
PFN1-201ENST00000225655 PPM1DO15297 605 aa17.8■□□□□ 0.44
PFN1-201ENST00000225655 APRTP07741 180 aa17.8■□□□□ 0.44
PFN1-201ENST00000225655 ZSCAN5DPP0CG00 497 aa17.8■□□□□ 0.44
PFN1-201ENST00000225655 CTAGE8P0CG41 777 aa17.8■□□□□ 0.44
PFN1-201ENST00000225655 VPS41P49754 854 aa17.8■□□□□ 0.44
PFN1-201ENST00000225655 C16orf72Q14CZ0 275 aa17.8■□□□□ 0.44
PFN1-201ENST00000225655 SLC1A5Q15758 541 aa17.8■□□□□ 0.44
PFN1-201ENST00000225655 PPP1R21Q6ZMI0 780 aa17.8■□□□□ 0.44
PFN1-201ENST00000225655 ZNF574Q6ZN55 896 aaPredicted RBP17.8■□□□□ 0.44
PFN1-201ENST00000225655 USP53Q70EK8 1073 aa17.8■□□□□ 0.44
PFN1-201ENST00000225655 CTAGE6Q86UF2 777 aa17.8■□□□□ 0.44
PFN1-201ENST00000225655 CTAGE4Q8IX94 777 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms