RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 KCTD8Q6ZWB6 473 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 GJD3Q8N144 294 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 COX18Q8N8Q8 333 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 ZNF540Q8NDQ6 660 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 LRTM1Q9HBL6 345 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 RAP2CQ9Y3L5 183 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 ASNA1O43681 348 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 UBOX5O94941 541 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 ANXA4P09525 319 aaPredicted RBP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 FAUP35544 74 aaKnown RBP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 KIR3DL1P43629 444 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 SELENOVP59797 346 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 NOMO3P69849 1222 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 BNIP2Q12982 314 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 SLC22A15Q8IZD6 547 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 PIH1D2Q8WWB5 315 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 NUS1Q96E22 293 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 ZNF514Q96K75 400 aaPredicted RBP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 TBL1XR1Q9BZK7 514 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 SPATA6Q9NWH7 488 aaPredicted RBP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 GGA2Q9UJY4 613 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 A0A1W2PQ72 361 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 A8MU76 341 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 INSIG1O15503 277 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 LAMTOR5O43504 91 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 TSPAN1O60635 241 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 TNFAIP8O95379 198 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 CLDN9O95484 217 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 PFKMP08237 780 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 DMPKQ09013 629 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 RFX4Q33E94 735 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 TEX44Q53QW1 395 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 CLVS1Q8IUQ0 354 aaPredicted RBP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 APLFQ8IW19 511 aaPredicted RBP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 IL25Q9H293 177 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 MOCS1Q9NZB8 636 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 COL5A2P05997 1499 aaPredicted RBP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 A0A087WXM4 84 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 SLC22A3O75751 556 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 GATBO75879 557 aaKnown RBP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 WFS1O76024 890 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 CYP17A1P05093 508 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 ALOX5P09917 674 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 MTHFRP42898 656 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 BCAP31P51572 246 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 PSME3P61289 254 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 SLC9B1Q4ZJI4 515 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 EARS2Q5JPH6 523 aaKnown RBP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 ATXN2LQ8WWM7 1075 aaKnown RBP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 MBOAT7Q96N66 472 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 OR2AG1Q9H205 316 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 ACP6Q9NPH0 428 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 B3GAT2Q9NPZ5 323 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 C19orf25Q9UFG5 118 aaPredicted RBP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 GNEQ9Y223 722 aaKnown RBP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 REM1O75628 298 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 TRAPPC6AO75865 159 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 CD247P20963 164 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 C1QTNF8P60827 252 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 GFOD2Q3B7J2 385 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 GCNT6Q5T4J0 391 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 RNF43Q68DV7 783 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 LCLAT1Q6UWP7 414 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 ADGRG6Q86SQ4 1221 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 CHST4Q8NCG5 386 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 CLHC1Q8NHS4 586 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 LMX1AQ8TE12 382 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 SNX33Q8WV41 574 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 AP3S1Q92572 193 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 PMM1Q92871 262 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 TESCQ96BS2 214 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 MAF1Q9H063 256 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.47□□□□□ -0.73
TRPS1-201ENST00000220888 TLR9Q9NR96 1032 aa10.47□□□□□ -0.73
TRPS1-201ENST00000220888 HAT1O14929 419 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 RB1P06400 928 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 HNRNPLP14866 589 aaKnown RBP eCLIP10.46□□□□□ -0.732e-9■■■□□ 15.8
TRPS1-201ENST00000220888 SCTRP47872 440 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 SCRN3Q0VDG4 424 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 ZNF776Q68DI1 518 aaPredicted RBP10.46□□□□□ -0.73
TRPS1-201ENST00000220888 ULK3Q6PHR2 472 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 SLC29A4Q7RTT9 530 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 FCRL4Q96PJ5 515 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 DUSP9Q99956 384 aaKnown RBP10.46□□□□□ -0.73
TRPS1-201ENST00000220888 B3GNT5Q9BYG0 378 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 PCDH18Q9HCL0 1135 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 CNOT6Q9ULM6 557 aaKnown RBP10.46□□□□□ -0.73
TRPS1-201ENST00000220888 SSR3Q9UNL2 185 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 PCDHGC4Q9Y5F7 938 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 KLRG2A4D1S0 409 aaPredicted RBP10.46□□□□□ -0.73
TRPS1-201ENST00000220888 HOXB2P14652 356 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 CAPGP40121 348 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 HCAR3P49019 387 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 PTPN5P54829 565 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 CDH13P55290 713 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 CYP4F3Q08477 520 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 HEPACAMQ14CZ8 416 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 CARD16Q5EG05 197 aa10.46□□□□□ -0.73
TRPS1-201ENST00000220888 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms