RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 RASSF5Q8WWW0 418 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 LENG1Q96BZ8 264 aaPredicted RBP13.46□□□□□ -0.25
SF3A1-201ENST00000215793 FEM1CQ96JP0 617 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 TMEM27Q9HBJ8 222 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 SMPD3Q9NY59 655 aaPredicted RBP13.46□□□□□ -0.25
SF3A1-201ENST00000215793 PDP1Q9P0J1 537 aaPredicted RBP13.46□□□□□ -0.25
SF3A1-201ENST00000215793 TIMM22Q9Y584 194 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 RGS10O43665 173 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 IDH3BO43837 385 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 KERAO60938 352 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 DUSP11O75319 330 aaKnown RBP13.46□□□□□ -0.25
SF3A1-201ENST00000215793 OR4Q2P0C623 313 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 AQP1P29972 269 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 ZNF132P52740 706 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 DSC2Q02487 901 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 ZBTB6Q15916 424 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 GCNT6Q5T4J0 391 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 TSTD2Q5T7W7 516 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 LPCAT4Q643R3 524 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 CPA6Q8N4T0 437 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 C2CD4BA6NLJ0 364 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 FPGTO14772 594 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 SLC7A4O43246 635 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 TREHO43280 583 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 ESR1P03372 595 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 IFNW1P05000 195 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 ANXA4P09525 319 aaPredicted RBP13.46□□□□□ -0.25
SF3A1-201ENST00000215793 PRPS2P11908 318 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 LIPEQ05469 1076 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 C2orf80Q0P641 193 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 PPM1JQ5JR12 505 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 PIK3R6Q5UE93 754 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 DNAJC5Q9H3Z4 198 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 EIF2B3Q9NR50 452 aaKnown RBP13.46□□□□□ -0.25
SF3A1-201ENST00000215793 ING3Q9NXR8 418 aa13.46□□□□□ -0.25
SF3A1-201ENST00000215793 FADS2P1A8MWK0 482 aa13.46□□□□□ -0.26
SF3A1-201ENST00000215793 KCNU1A8MYU2 1149 aa13.46□□□□□ -0.26
SF3A1-201ENST00000215793 TULP3O75386 442 aa13.46□□□□□ -0.26
SF3A1-201ENST00000215793 NDUFV1P49821 464 aa13.46□□□□□ -0.26
SF3A1-201ENST00000215793 PTPN5P54829 565 aa13.46□□□□□ -0.26
SF3A1-201ENST00000215793 LILRA4P59901 499 aa13.46□□□□□ -0.26
SF3A1-201ENST00000215793 RALGDSQ12967 914 aa13.46□□□□□ -0.26
SF3A1-201ENST00000215793 VPS26BQ4G0F5 336 aa13.46□□□□□ -0.26
SF3A1-201ENST00000215793 FAAH2Q6GMR7 532 aa13.46□□□□□ -0.26
SF3A1-201ENST00000215793 ZNF730Q6ZMV8 503 aa13.46□□□□□ -0.26
SF3A1-201ENST00000215793 ZNF563Q8TA94 476 aa13.46□□□□□ -0.26
SF3A1-201ENST00000215793 ROPN1LQ96C74 230 aa13.46□□□□□ -0.26
SF3A1-201ENST00000215793 AGAP2Q99490 1192 aa13.46□□□□□ -0.26
SF3A1-201ENST00000215793 GNEQ9Y223 722 aaKnown RBP13.46□□□□□ -0.26
SF3A1-201ENST00000215793 LOC110117498-PIK3R3F6TDL0 507 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 DHFRP00374 187 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 FABP3P05413 133 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 PSMA1P25786 263 aaKnown RBP13.45□□□□□ -0.26
SF3A1-201ENST00000215793 FITM2Q8N6M3 262 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 TRPV3Q8NET8 790 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 BCKDKO14874 412 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 INSIG1O15503 277 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 POP4O95707 220 aaKnown RBP13.45□□□□□ -0.26
SF3A1-201ENST00000215793 THRBP10828 461 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 MNDAP41218 407 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 GMFBP60983 142 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 IL10RBQ08334 325 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 NDUFA9Q16795 377 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 FSTL4Q6MZW2 842 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 MED27Q6P2C8 311 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 CHST15Q7LFX5 561 aaPredicted RBP13.45□□□□□ -0.26
SF3A1-201ENST00000215793 SLCO6A1Q86UG4 719 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 SLC43A3Q8NBI5 491 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 HTATIP2Q9BUP3 242 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 TRMT13Q9NUP7 481 aaKnown RBP13.45□□□□□ -0.26
SF3A1-201ENST00000215793 FETUBQ9UGM5 382 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 ZNF222Q9UK12 451 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 COLEC10Q9Y6Z7 277 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 IGLV3-22A0A075B6J6 115 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 PSMD11O00231 422 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 ADAMDEC1O15204 470 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 MAGEB3O15480 346 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 CDH3P22223 829 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 MPP1Q00013 466 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 SULT1C3Q6IMI6 304 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 PLET1Q6UQ28 207 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 ATG14Q6ZNE5 492 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 SLC38A4Q969I6 547 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 CENPNQ96H22 339 aaPredicted RBP13.45□□□□□ -0.26
SF3A1-201ENST00000215793 LENG8Q96PV6 779 aaPredicted RBP13.45□□□□□ -0.26
SF3A1-201ENST00000215793 GATA5Q9BWX5 397 aaPredicted RBP13.45□□□□□ -0.26
SF3A1-201ENST00000215793 ALG2Q9H553 416 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 WBP11Q9Y2W2 641 aaKnown RBP13.45□□□□□ -0.26
SF3A1-201ENST00000215793 VIPP01282 170 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 IGFALSP35858 605 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 PTGER3P43115 390 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 SIM2Q14190 667 aaPredicted RBP13.45□□□□□ -0.26
SF3A1-201ENST00000215793 FASTKD3Q14CZ7 662 aaKnown RBP13.45□□□□□ -0.26
SF3A1-201ENST00000215793 RALGPS2Q86X27 583 aaPredicted RBP13.45□□□□□ -0.26
SF3A1-201ENST00000215793 CLPTM1LQ96KA5 538 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 MCUBQ9NWR8 336 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 ERVW-1Q9UQF0 538 aa13.45□□□□□ -0.26
SF3A1-201ENST00000215793 TNFRSF11BO00300 401 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 PLOD3O60568 738 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 STBD1O95210 358 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms