RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 BTN2A3PQ96KV6 586 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ART5Q96L15 291 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 HIST1H2AAQ96QV6 131 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 KCNS3Q9BQ31 491 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 TARS2Q9BW92 718 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 CDHR5Q9HBB8 845 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 CLEC4AQ9UMR7 237 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 CDH10Q9Y6N8 788 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 HTR3EA5X5Y0 456 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 OR2AG2A6NM03 316 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ANXA2P2A6NMY6 339 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 CPSF4O95639 269 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ANXA2P07355 339 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 TUBP50607 506 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 HADHBP55084 474 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MED22Q15528 200 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 UXS1Q8NBZ7 420 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 OR2L5Q8NG80 312 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 EXOC2Q96KP1 924 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 NODALQ96S42 347 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 TCF25Q9BQ70 676 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 SHCBP1LQ9BZQ2 653 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 KIAA1683Q9H0B3 1180 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MAST2Q6P0Q8 1798 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ELOVL7A1L3X0 281 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 TPP1O14773 563 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 AZIN1O14977 448 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 DDX3YO15523 660 aaKnown RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 JCHAINP01591 159 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SAGP10523 405 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PKMP14618 531 aaKnown RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 KDELR1P24390 212 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 S100PP25815 95 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SLC25A52Q3SY17 297 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 LDLRAP1Q5SW96 308 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SUSD4Q5VX71 490 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 CREG2Q8IUH2 290 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 CHERPQ8IWX8 916 aaKnown RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ADGRG2Q8IZP9 1017 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 OXR1Q8N573 874 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 OR14K1Q8NGZ2 314 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 CHAC2Q8WUX2 184 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 KAT2BQ92831 832 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 GPER1Q99527 375 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 OSGEPL1Q9H4B0 414 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 MSRAQ9UJ68 235 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 MRPS17Q9Y2R5 130 aaKnown RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 DOCK6Q96HP0 2047 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PCDHGA12O60330 932 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 MICAL2O94851 1124 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PIGNO95427 931 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 LAMP2P13473 410 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 GYS1P13807 737 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 CYP3A5P20815 502 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 GYS2P54840 703 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 CDH13P55290 713 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ELF3P78545 371 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 FOXO4P98177 505 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 CCNYL2Q5T2Q4 361 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 FAM131AQ6UXB0 335 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 KDELC2Q7Z4H8 507 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 C11orf96Q7Z7L8 435 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SLC15A3Q8IY34 581 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 GIMAP5Q96F15 307 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 KCTD7Q96MP8 289 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 EPYCQ99645 322 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 HDHD5Q9BXW7 423 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 FARSBQ9NSD9 589 aaKnown RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PCDHGA11Q9Y5H2 935 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 WDR81Q562E7 1941 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 C2orf74A8MZ97 194 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 H3BRB1 525 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SHOX2O60902 331 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PCDH8O95206 1070 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 FABP3P05413 133 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 BGNP21810 368 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PTGS2P35354 604 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SCNN1AP37088 669 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 CCR4P51679 360 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SLC13A2Q13183 592 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ZBED5Q49AG3 693 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ABCA11PQ4W5N1 156 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 FAM76BQ5HYJ3 339 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SV2AQ7L0J3 742 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF34Q8IZ26 560 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PARP8Q8N3A8 854 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 HCAR2Q8TDS4 363 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 STYXQ8WUJ0 223 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 CAPSLQ8WWF8 208 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 OSTF1Q92882 214 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ART4Q93070 314 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 DGCR6LQ9BY27 220 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PORCNQ9H237 461 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 TUT1Q9H6E5 874 aaKnown RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SDHAF3Q9NRP4 125 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SNTG2Q9NY99 539 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 TMEM5Q9Y2B1 443 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ZDBF2Q9HCK1 2354 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 CLCA1A8K7I4 914 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 RLN1P04808 185 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms