RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 MBLAC1A4D2B0 266 aaPredicted RBP10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 LDB2O43679 373 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 CNTN5O94779 1100 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 PAPSS2O95340 614 aaPredicted RBP10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 S100BP04271 92 aaPredicted RBP10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 UMPSP11172 480 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 MBL2P11226 248 aaPredicted RBP10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 CDH3P22223 829 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 GRIK1P39086 918 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 SLC26A3P40879 764 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 IST1P53990 364 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 ARSFP54793 590 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 TIAL1Q01085 375 aaKnown RBP eCLIP10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 PPP1R8Q12972 351 aaKnown RBP10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 CYP2A13Q16696 494 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 RGS21Q2M5E4 152 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 PLA2G4EQ3MJ16 856 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 MRNIPQ6NTE8 343 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 USP51Q70EK9 711 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 LRRTM3Q86VH5 581 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 SCN4BQ8IWT1 228 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 FNDC5Q8NAU1 212 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 TMBIM1Q969X1 311 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 NSMCE3Q96MG7 304 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 RTP3Q9BQQ7 232 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 SLC7A5P2Q9GIP4 190 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 CCDC68Q9H2F9 335 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 CSNK1G1Q9HCP0 422 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 C8orf4Q9NR00 106 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 ABCC13Q9NSE7 274 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 TMEM9Q9P0T7 183 aa10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 TSR3Q9UJK0 312 aaKnown RBP10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 FNDC3AQ9Y2H6 1198 aaKnown RBP10.43□□□□□ -0.74
CX3CL1-201ENST00000006053 IQCA1LA6NCM1 817 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 CDC7O00311 574 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 CHEK2O96017 543 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 IGLV3-25P01717 112 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 THRBP10828 461 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 TCF3P15923 654 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 CRYBB1P53674 252 aaPredicted RBP10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 MLLT10P55197 1068 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 RCAN2Q14206 197 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 SDHAF4Q5VUM1 108 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 R3HCC1LQ7Z5L2 792 aaKnown RBP10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 TINF2Q9BSI4 451 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 ABHD16BQ9H3Z7 469 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 AIG1Q9NVV5 245 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 IKZF3Q9UKT9 509 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 PCDHGA11Q9Y5H2 935 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 MROH6A6NGR9 719 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 ECI2O75521 394 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 PEX11BO96011 259 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 F2P00734 622 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 MYCP01106 439 aaPredicted RBP10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 POMCP01189 267 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 MMP2P08253 660 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 IL12AP29459 219 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 HOXC13P31276 330 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 EEFSECP57772 596 aaKnown RBP10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 BEX3Q00994 111 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 BCL2A1Q16548 175 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 ALFQ53S48 1182 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 UGT3A1Q6NUS8 523 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 SYVN1Q86TM6 617 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 METTL23Q86XA0 190 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 PTRH1Q86Y79 214 aaKnown RBP10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 TMEM199Q8N511 208 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 ITFG1Q8TB96 612 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 STAG3L4Q8TBR4 150 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 YTHDF1Q9BYJ9 559 aaKnown RBP10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 CCDC90BQ9GZT6 254 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 MUC13Q9H3R2 512 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 SMURF2Q9HAU4 748 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 NMUR1Q9HB89 426 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 CPA4Q9UI42 421 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 GNPTGQ9UJJ9 305 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 PSME2Q9UL46 239 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 GIT1Q9Y2X7 761 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 ZNF236Q9UL36 1845 aa10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 TRIP12Q14669 1992 aaPredicted RBP10.42□□□□□ -0.74
CX3CL1-201ENST00000006053 A0A1W2PQH9 124 aa10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 NPEPPSL1A6NEC2 478 aa10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 NOBOXO60393 691 aa10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 DEAF1O75398 565 aaPredicted RBP10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 EEDO75530 441 aaKnown RBP10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 CPNE6O95741 557 aa10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 CTSHP09668 335 aa10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 HOXD8P13378 290 aaPredicted RBP10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 MZF1P28698 734 aaPredicted RBP10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 RCVRNP35243 200 aa10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 GJA5P36382 358 aa10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 PCYT1AP49585 367 aa10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 TMBIM6P55061 237 aa10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 GRSF1Q12849 480 aaKnown RBP eCLIP10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 DAG1Q14118 895 aa10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 SELPLGQ14242 412 aa10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 TRIM16LQ309B1 348 aa10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 PERM1Q5SV97 790 aa10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 PIK3R6Q5UE93 754 aa10.41□□□□□ -0.74
CX3CL1-201ENST00000006053 TAF2Q6P1X5 1199 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms