RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Ptbp3Q8BHD7 523 aaKnown RBP13.24□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Aifm2Q8BUE4 373 aa13.24□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Gin1Q8K259 518 aa13.24□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 St7Q99M96 577 aa13.24□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 CutalQ9D1U5 156 aa13.24□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Ribc2Q9D4Q1 309 aa13.24□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Ing2Q9ESK4 281 aa13.24□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Slc29a1Q9JIM1 460 aa13.24□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Olfr1049A2ARZ0 308 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Sult2a3D3Z1W5 285 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Gm20431E9PY39 371 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Olfr620E9PZ66 313 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Vmn2r44L7N2E1 861 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 DcxO88809 366 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Acvr2bP27040 536 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Polr2gP62488 172 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Gdpgp1Q3TLS3 386 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Kctd21Q3URF8 260 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 StradaQ3UUJ4 431 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Scn2bQ56A07 215 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Slc6a3Q61327 619 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Crtc1Q68ED7 630 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Kank2Q8BX02 843 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Cnot6Q8K3P5 557 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Ntmt1Q8R2U4 223 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Igsf8Q8R366 611 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 AcmsdQ8R519 336 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Tbc1d22aQ8R5A6 516 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Fastkd2Q922E6 689 aaKnown RBP13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 MlycdQ99J39 492 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Timp4Q9JHB3 224 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Pex14Q9R0A0 376 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Nme3Q9WV85 169 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Hsbp1l1B2RXB2 72 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Gm3526E9PZM0 191 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 AnpepP97449 966 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Adra1dP97714 562 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Opa3Q505D7 179 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Palm2Q8BR92 376 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Slc44a2Q8BY89 706 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Trim35Q8C006 501 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Robo4Q8C310 1012 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Rsph14Q9D3W1 341 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Tomm20Q9DCC8 145 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 GhrlQ9EQX0 117 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Galk1Q9R0N0 392 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 M1apQ9Z0E1 529 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Zscan12Q9Z1D7 501 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Baz2aQ91YE5 1889 aaKnown RBP13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 PtprdQ64487 1912 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Gm2832F7AEC7 200 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 P01631 113 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 En1P09065 401 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Hsd17b4P51660 735 aaKnown RBP13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Cd163Q2VLH6 1121 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Rslcan18Q7M6X5 460 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Mab21L3Q8CI17 429 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Sh3kbp1Q8R550 709 aaKnown RBP13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 L2hgdhQ91YP0 464 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Mcm8Q9CWV1 833 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 GarsQ9CZD3 729 aaKnown RBP13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Pak1ip1Q9DCE5 382 aaKnown RBP13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Nrip2Q9JHR9 270 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Copg1Q9QZE5 874 aa13.23□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Ccdc194A0A140LIT1 234 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Spaca6E9Q8Q8 339 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Akain1G3UWD5 69 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Btg4O70552 250 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Flt3lgP49772 232 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Mc4rP56450 332 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Gm853Q3UNZ2 425 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 UrgcpQ5NCI0 926 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Nqo1Q64669 274 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Prickle2Q80Y24 845 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Ints10Q8K2A7 710 aaKnown RBP13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Rxfp2Q91ZZ5 737 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Clstn3Q99JH7 956 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Akirin1Q99LF1 191 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Ints12Q9D168 461 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Mettl15Q9DCL4 406 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Prokr1Q9JKL1 393 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Homer2Q9QWW1 354 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Ruvbl2Q9WTM5 463 aaKnown RBP13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Skint6A7XUZ6 1240 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 GmlE9PX31 176 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 2010300C02RikE9Q3M9 1175 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Slc22a8O88909 537 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 F2P19221 618 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Cdkn2bP55271 130 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Hcrtr1P58307 416 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Slc22a23Q3UHH2 689 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Actr3bQ641P0 418 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 PtprjQ64455 1238 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Dclk2Q6PGN3 756 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Cstf2Q8BIQ5 580 aaKnown RBP13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 4921511C20RikQ8BVT7 469 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Tmem246Q91YV9 403 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Dcdc2cQ9D1B8 347 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Nipa2Q9JJC8 359 aa13.22□□□□□ -0.29
Prpf38b-201ENSMUST00000029480 Gipc2Q9Z2H7 314 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms