RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Rad9bQ6WBX7 403 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Q810M1 233 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Q810N5 247 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Cndp2Q9D1A2 475 aaKnown RBP10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 TtpalQ9D3D0 343 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pnp2Q9D8C9 305 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 DpysQ9EQF5 519 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ripk3Q9QZL0 486 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Orc5Q9WUV0 435 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Itga8A2ARA8 1062 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Vmn1r238E9Q373 306 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Polr2lP62876 67 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 S100a13P97352 98 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pacs2Q3V3Q7 862 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Itga2Q62469 1178 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Capn3Q64691 821 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fam210aQ8BGY7 273 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Samd3Q8C4H2 520 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 SpastQ9QYY8 614 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm37596A0A0A6YXL2 336 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fibcd1A2AV25 459 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Otud3B1AZ99 396 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Mab21l1O70299 359 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 YwhaqP68254 245 aaKnown RBP10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 UtyP79457 1212 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pnpla5Q32LZ8 432 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 BC080695Q66JY9 481 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ahsa2Q8N9S3 331 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Mob2Q8VI63 235 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Mrgpra2Q91WW4 305 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Q9D8N1 392 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Subh2bvQ9D9Z7 123 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Spag4Q9JJF2 443 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fbxo16Q9QZM9 334 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Abca17E9PX95 1733 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Dgcr6O35347 198 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 HunkO88866 714 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tmem173Q3TBT3 378 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Rnf43Q5NCP0 784 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Commd7Q8BG94 200 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Syt15Q8C6N3 418 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Trim61Q8JZK6 461 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Slc25a11Q9CR62 314 aaKnown RBP10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Acbd6Q9D061 282 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Dtwd1Q9D8U7 304 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Il21Q9ES17 146 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tex16F6WNY1 1150 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm8857L7N291 182 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Clec2lP0C7M9 211 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pax7P47239 503 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Rplp2P99027 115 aaKnown RBP10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Sec31bQ3TZ89 1158 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Mpzl3Q3V3F6 237 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Efcab3Q80X60 432 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Dnajb13Q80Y75 316 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Rnase10Q9D5A9 208 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Usp12Q9D9M2 370 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tssc4Q9JHE7 317 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr596F8VQ26 312 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr171G5E8J1 314 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Khdc4Q3TCX3 612 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tbc1d24Q3UUG6 561 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zbtb2Q3V3W4 514 aaKnown RBP10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Snap91Q61548 901 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 BpiQ67E05 483 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Dpp10Q6NXK7 797 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fam181bQ80VF6 417 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Cmc1Q9CPZ8 106 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Mospd2Q9CWP6 518 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Smad9Q9JIW5 430 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Bmp10Q9R229 421 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Chil5A0A0G2JDS2 431 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zfp969A2ART2 485 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zfp973A2BE20 318 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Hcn1O88704 910 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Lrrc58Q3UGP9 366 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Smu1Q3UKJ7 513 aaKnown RBP10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 P2rx3Q3UR32 397 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Slc20a1Q61609 681 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 KmoQ91WN4 479 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Spef1Q99JL1 234 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fam212aQ9CX62 282 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Agpat3Q9D517 376 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 UqcrbQ9D855 111 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 PolkQ9QUG2 852 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Znf536Q8K083 1302 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 BC035947B2RQY6 695 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 CcnkO88874 554 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 EporP14753 507 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gna12P27600 379 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 A630001G21RikQ3UTB2 229 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Best3Q6H1V1 669 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Slitrk4Q810B8 837 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Grik4Q8BMF5 956 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Cgrrf1Q8BMJ7 332 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pcdha6Q91Y14 946 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Wwp2Q9DBH0 870 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ngly1Q9JI78 651 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Vmn1r39G3UWE6 305 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr1121L7MTT1 314 aa10.07□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms