RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.14
PHGDH-222ENST00000641587 GPR162Q16538 588 aa14.15□□□□□ -0.14
PHGDH-222ENST00000641587 MAP3K19Q56UN5 1328 aa14.15□□□□□ -0.15
PHGDH-222ENST00000641587 C1QTNF8P60827 252 aa14.14□□□□□ -0.15
PHGDH-222ENST00000641587 PELP1Q8IZL8 1130 aaKnown RBP14.14□□□□□ -0.15
PHGDH-222ENST00000641587 NLGN2Q8NFZ4 835 aa14.14□□□□□ -0.15
PHGDH-222ENST00000641587 TERF2IPQ9NYB0 399 aa14.14□□□□□ -0.15
PHGDH-222ENST00000641587 ANKRD36BQ8N2N9 1353 aa14.13□□□□□ -0.15
PHGDH-222ENST00000641587 HOXC9P31274 260 aa14.13□□□□□ -0.15
PHGDH-222ENST00000641587 SLC27A3Q5K4L6 730 aa14.13□□□□□ -0.15
PHGDH-222ENST00000641587 TFCP2L1Q9NZI6 479 aa14.13□□□□□ -0.15
PHGDH-222ENST00000641587 CLSPNQ9HAW4 1339 aa14.13□□□□□ -0.15
PHGDH-222ENST00000641587 POLD1P28340 1107 aa14.11□□□□□ -0.15
PHGDH-222ENST00000641587 USHBP1Q8N6Y0 703 aa14.11□□□□□ -0.15
PHGDH-222ENST00000641587 SLC16A10Q8TF71 515 aa14.11□□□□□ -0.15
PHGDH-222ENST00000641587 TESK2Q96S53 571 aa14.11□□□□□ -0.15
PHGDH-222ENST00000641587 AMPHP49418 695 aa14.1□□□□□ -0.15
PHGDH-222ENST00000641587 RRS1Q15050 365 aaKnown RBP14.1□□□□□ -0.15
PHGDH-222ENST00000641587 COG3Q96JB2 828 aa14.1□□□□□ -0.15
PHGDH-222ENST00000641587 TONSLQ96HA7 1378 aa14.09□□□□□ -0.15
PHGDH-222ENST00000641587 MSL1Q68DK7 614 aa14.09□□□□□ -0.15
PHGDH-222ENST00000641587 ZCRB1Q8TBF4 217 aaKnown RBP14.09□□□□□ -0.15
PHGDH-222ENST00000641587 CCNL1Q9UK58 526 aaPredicted RBP14.09□□□□□ -0.15
PHGDH-222ENST00000641587 ST20-MTHFSA0A0A6YYL1 179 aa14.08□□□□□ -0.16
PHGDH-222ENST00000641587 YBX3P16989 372 aaKnown RBP eCLIP14.08□□□□□ -0.162e-7■□□□□ 10.4
PHGDH-222ENST00000641587 NBPF6Q5VWK0 638 aa14.08□□□□□ -0.16
PHGDH-222ENST00000641587 COL23A1Q86Y22 540 aaPredicted RBP14.08□□□□□ -0.16
PHGDH-222ENST00000641587 NBPF4Q96M43 638 aa14.08□□□□□ -0.16
PHGDH-222ENST00000641587 CEP350Q5VT06 3117 aa14.08□□□□□ -0.16
PHGDH-222ENST00000641587 C5P01031 1676 aa14.07□□□□□ -0.16
PHGDH-222ENST00000641587 MSH5O43196 834 aa14.07□□□□□ -0.16
PHGDH-222ENST00000641587 PUS7Q96PZ0 661 aaKnown RBP14.07□□□□□ -0.16
PHGDH-222ENST00000641587 USP47Q96K76 1375 aa14.07□□□□□ -0.16
PHGDH-222ENST00000641587 GIGYF1O75420 1035 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-222ENST00000641587 ZEB1P37275 1124 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-222ENST00000641587 GGNBP2Q9H3C7 697 aa14.06□□□□□ -0.16
PHGDH-222ENST00000641587 TOGARAM1Q9Y4F4 1720 aa14.06□□□□□ -0.16
PHGDH-222ENST00000641587 RTL1A6NKG5 1358 aa14.06□□□□□ -0.16
PHGDH-222ENST00000641587 TAF1LQ8IZX4 1826 aa14.06□□□□□ -0.16
PHGDH-222ENST00000641587 KIF20BQ96Q89 1820 aa14.04□□□□□ -0.16
PHGDH-222ENST00000641587 FYB1O15117 783 aa14.03□□□□□ -0.16
PHGDH-222ENST00000641587 SMIM5Q71RC9 77 aa14.03□□□□□ -0.16
PHGDH-222ENST00000641587 AMIGO3Q86WK7 504 aa14.03□□□□□ -0.16
PHGDH-222ENST00000641587 ITGB4P16144 1822 aa14.02□□□□□ -0.16
PHGDH-222ENST00000641587 SMG6Q86US8 1419 aaKnown RBP14.02□□□□□ -0.16
PHGDH-222ENST00000641587 PALLDQ8WX93 1383 aa14.02□□□□□ -0.17
PHGDH-222ENST00000641587 HSP90AB2PQ58FF8 381 aa14.02□□□□□ -0.17
PHGDH-222ENST00000641587 RAPGEF4Q8WZA2 1011 aa14.02□□□□□ -0.17
PHGDH-222ENST00000641587 TATP17735 454 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-222ENST00000641587 C4BP0C0L5 1744 aa14.01□□□□□ -0.17
PHGDH-222ENST00000641587 ATP10DQ9P241 1426 aa14□□□□□ -0.17
PHGDH-222ENST00000641587 CYP27B1O15528 508 aa14□□□□□ -0.17
PHGDH-222ENST00000641587 MPRIPQ6WCQ1 1025 aa14□□□□□ -0.17
PHGDH-222ENST00000641587 WWC3Q9ULE0 1092 aa14□□□□□ -0.17
PHGDH-222ENST00000641587 UBR3Q6ZT12 1888 aa13.99□□□□□ -0.17
PHGDH-222ENST00000641587 INSRP06213 1382 aa13.99□□□□□ -0.17
PHGDH-222ENST00000641587 PKD1L3Q7Z443 1732 aa13.99□□□□□ -0.17
PHGDH-222ENST00000641587 CGNL1Q0VF96 1302 aa13.99□□□□□ -0.17
PHGDH-222ENST00000641587 PCDH11XQ9BZA7 1347 aa13.99□□□□□ -0.17
PHGDH-222ENST00000641587 PCDH11YQ9BZA8 1340 aa13.99□□□□□ -0.17
PHGDH-222ENST00000641587 FLT4P35916 1363 aa13.98□□□□□ -0.17
PHGDH-222ENST00000641587 GRIN3BO60391 1043 aa13.98□□□□□ -0.17
PHGDH-222ENST00000641587 EMILIN1Q9Y6C2 1016 aa13.98□□□□□ -0.17
PHGDH-222ENST00000641587 MAP2P11137 1827 aaKnown RBP13.97□□□□□ -0.17
PHGDH-222ENST00000641587 PHF14O94880 888 aa13.97□□□□□ -0.17
PHGDH-222ENST00000641587 TMF1P82094 1093 aa13.96□□□□□ -0.17
PHGDH-222ENST00000641587 ZNF526Q8TF50 670 aaPredicted RBP13.96□□□□□ -0.17
PHGDH-222ENST00000641587 ADCY9O60503 1353 aa13.96□□□□□ -0.18
PHGDH-222ENST00000641587 PIGBQ92521 554 aa13.95□□□□□ -0.18
PHGDH-222ENST00000641587 AK7Q96M32 723 aa13.95□□□□□ -0.18
PHGDH-222ENST00000641587 CD2APQ9Y5K6 639 aa13.95□□□□□ -0.18
PHGDH-222ENST00000641587 NCAPD2Q15021 1401 aa13.94□□□□□ -0.18
PHGDH-222ENST00000641587 LINC00116Q8NCU8 138 aa13.94□□□□□ -0.18
PHGDH-222ENST00000641587 CARD14Q9BXL6 1004 aa13.94□□□□□ -0.18
PHGDH-222ENST00000641587 NSD3Q9BZ95 1437 aa13.94□□□□□ -0.18
PHGDH-222ENST00000641587 ANKRD26Q9UPS8 1709 aa13.94□□□□□ -0.18
PHGDH-222ENST00000641587 IGSF1Q8N6C5 1336 aa13.93□□□□□ -0.18
PHGDH-222ENST00000641587 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.93□□□□□ -0.18
PHGDH-222ENST00000641587 FLAD1Q8NFF5 587 aa13.93□□□□□ -0.18
PHGDH-222ENST00000641587 PPM1GO15355 546 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-222ENST00000641587 SLC24A1O60721 1099 aa13.92□□□□□ -0.18
PHGDH-222ENST00000641587 GPBP1L1Q9HC44 474 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-222ENST00000641587 TIMELESSQ9UNS1 1208 aa13.92□□□□□ -0.18
PHGDH-222ENST00000641587 KIF24Q5T7B8 1368 aa13.92□□□□□ -0.18
PHGDH-222ENST00000641587 LOC102724428A0A0B4J2F2 783 aa13.91□□□□□ -0.18
PHGDH-222ENST00000641587 SIK1P57059 783 aa13.91□□□□□ -0.18
PHGDH-222ENST00000641587 ITPK1Q13572 414 aa13.91□□□□□ -0.18
PHGDH-222ENST00000641587 SMARCC1Q92922 1105 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-222ENST00000641587 ASAP1Q9ULH1 1129 aa13.9□□□□□ -0.18
PHGDH-222ENST00000641587 KIAA1551Q9HCM1 1747 aa13.9□□□□□ -0.18
PHGDH-222ENST00000641587 SSFA2P28290 1259 aa13.89□□□□□ -0.19
PHGDH-222ENST00000641587 NKX1-1Q15270 411 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-222ENST00000641587 IFFO2Q5TF58 517 aa13.89□□□□□ -0.19
PHGDH-222ENST00000641587 EYA1Q99502 592 aa13.89□□□□□ -0.19
PHGDH-222ENST00000641587 GNPATO15228 680 aa13.88□□□□□ -0.19
PHGDH-222ENST00000641587 TMOD3Q9NYL9 352 aa13.88□□□□□ -0.19
PHGDH-222ENST00000641587 SPG7Q9UQ90 795 aa13.88□□□□□ -0.19
PHGDH-222ENST00000641587 N4BP2Q86UW6 1770 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-222ENST00000641587 CICQ96RK0 1608 aaPredicted RBP13.87□□□□□ -0.19
PHGDH-222ENST00000641587 PHKG2P15735 406 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms