RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 FAM98CQ17RN3 349 aaKnown RBP17.03■□□□□ 0.32
PHGDH-220ENST00000641570 NRAPQ86VF7 1730 aa17.03■□□□□ 0.32
PHGDH-220ENST00000641570 PCDH11XQ9BZA7 1347 aa17.02■□□□□ 0.32
PHGDH-220ENST00000641570 PCDH11YQ9BZA8 1340 aa17.02■□□□□ 0.32
PHGDH-220ENST00000641570 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.02■□□□□ 0.32
PHGDH-220ENST00000641570 EXOC5O00471 708 aa17.02■□□□□ 0.32
PHGDH-220ENST00000641570 RBM6P78332 1123 aaKnown RBP17.02■□□□□ 0.32
PHGDH-220ENST00000641570 NEUROD2Q15784 382 aa17.02■□□□□ 0.32
PHGDH-220ENST00000641570 DDB1Q16531 1140 aa17.02■□□□□ 0.32
PHGDH-220ENST00000641570 ZNF530Q6P9A1 599 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-220ENST00000641570 BARGINQ6ZT62 677 aa17.02■□□□□ 0.32
PHGDH-220ENST00000641570 ZCRB1Q8TBF4 217 aaKnown RBP17.02■□□□□ 0.32
PHGDH-220ENST00000641570 ATRNO75882 1429 aa17.02■□□□□ 0.31
PHGDH-220ENST00000641570 RXRBP28702 533 aa17.01■□□□□ 0.31
PHGDH-220ENST00000641570 PDE3BQ13370 1112 aa17.01■□□□□ 0.31
PHGDH-220ENST00000641570 HSP90AB1P08238 724 aaKnown RBP17■□□□□ 0.31
PHGDH-220ENST00000641570 NFE2L2Q16236 605 aa17■□□□□ 0.31
PHGDH-220ENST00000641570 NGEFQ8N5V2 710 aa17■□□□□ 0.31
PHGDH-220ENST00000641570 RGPD1P0DJD0 1748 aa16.99■□□□□ 0.31
PHGDH-220ENST00000641570 OVOS2A0A0G2JMS6 1433 aa16.99■□□□□ 0.31
PHGDH-220ENST00000641570 APAF1O14727 1248 aa16.99■□□□□ 0.31
PHGDH-220ENST00000641570 RIPK4P57078 832 aa16.99■□□□□ 0.31
PHGDH-220ENST00000641570 CALD1Q05682 793 aaKnown RBP16.99■□□□□ 0.31
PHGDH-220ENST00000641570 DDX54Q8TDD1 881 aaKnown RBP16.99■□□□□ 0.31
PHGDH-220ENST00000641570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.99■□□□□ 0.31
PHGDH-220ENST00000641570 SALL2Q9Y467 1007 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-220ENST00000641570 NCAPD2Q15021 1401 aa16.98■□□□□ 0.31
PHGDH-220ENST00000641570 IFNL2Q8IZJ0 200 aa16.98■□□□□ 0.31
PHGDH-220ENST00000641570 PARP4Q9UKK3 1724 aaKnown RBP16.98■□□□□ 0.31
PHGDH-220ENST00000641570 MEGF6O75095 1541 aa16.97■□□□□ 0.31
PHGDH-220ENST00000641570 GNAT3A8MTJ3 354 aa16.97■□□□□ 0.31
PHGDH-220ENST00000641570 AKAP4Q5JQC9 854 aa16.97■□□□□ 0.31
PHGDH-220ENST00000641570 PLEKHF1Q96S99 279 aa16.97■□□□□ 0.31
PHGDH-220ENST00000641570 RRP7AQ9Y3A4 280 aaKnown RBP16.97■□□□□ 0.31
PHGDH-220ENST00000641570 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.31
PHGDH-220ENST00000641570 MTHFSDQ2M296 383 aaKnown RBP16.96■□□□□ 0.31
PHGDH-220ENST00000641570 MAP3K5Q99683 1374 aa16.96■□□□□ 0.31
PHGDH-220ENST00000641570 TNS2Q63HR2 1409 aa16.96■□□□□ 0.3
PHGDH-220ENST00000641570 PHACTR3Q96KR7 559 aa16.95■□□□□ 0.3
PHGDH-220ENST00000641570 SEPT12Q8IYM1 358 aa16.94■□□□□ 0.3
PHGDH-220ENST00000641570 RGPD2P0DJD1 1756 aa16.94■□□□□ 0.3
PHGDH-220ENST00000641570 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
PHGDH-220ENST00000641570 TEFQ10587 303 aa16.93■□□□□ 0.3
PHGDH-220ENST00000641570 DISP2A7MBM2 1401 aa16.93■□□□□ 0.3
PHGDH-220ENST00000641570 SENP3-EIF4A1A0A087X0R7 540 aa16.92■□□□□ 0.3
PHGDH-220ENST00000641570 PHKG2P15735 406 aa16.92■□□□□ 0.3
PHGDH-220ENST00000641570 DCAF5Q96JK2 942 aa16.91■□□□□ 0.3
PHGDH-220ENST00000641570 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
PHGDH-220ENST00000641570 GLI3P10071 1580 aa16.89■□□□□ 0.3
PHGDH-220ENST00000641570 CCDC27Q2M243 656 aa16.89■□□□□ 0.29
PHGDH-220ENST00000641570 MPRIPQ6WCQ1 1025 aa16.89■□□□□ 0.29
PHGDH-220ENST00000641570 KRT27Q7Z3Y8 459 aa16.89■□□□□ 0.29
PHGDH-220ENST00000641570 SYTL4Q96C24 671 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-220ENST00000641570 LAS1LQ9Y4W2 734 aaKnown RBP16.89■□□□□ 0.29
PHGDH-220ENST00000641570 CABP4P57796 275 aa16.88■□□□□ 0.29
PHGDH-220ENST00000641570 ZBED9Q6R2W3 1325 aa16.88■□□□□ 0.29
PHGDH-220ENST00000641570 POTEAQ6S8J7 498 aa16.87■□□□□ 0.29
PHGDH-220ENST00000641570 MCM10Q7L590 875 aa16.87■□□□□ 0.29
PHGDH-220ENST00000641570 WNK3Q9BYP7 1800 aa16.86■□□□□ 0.29
PHGDH-220ENST00000641570 CYP27B1O15528 508 aa16.86■□□□□ 0.29
PHGDH-220ENST00000641570 ONECUT3O60422 494 aaPredicted RBP16.86■□□□□ 0.29
PHGDH-220ENST00000641570 MYH16Q9H6N6 1097 aa16.86■□□□□ 0.29
PHGDH-220ENST00000641570 TMOD3Q9NYL9 352 aa16.86■□□□□ 0.29
PHGDH-220ENST00000641570 LRRC37A3O60309 1634 aa16.85■□□□□ 0.29
PHGDH-220ENST00000641570 PKD1L3Q7Z443 1732 aa16.85■□□□□ 0.29
PHGDH-220ENST00000641570 RNMTO43148 476 aaKnown RBP16.85■□□□□ 0.29
PHGDH-220ENST00000641570 GOLGA2Q08379 1002 aa16.85■□□□□ 0.29
PHGDH-220ENST00000641570 WDR63Q8IWG1 891 aa16.85■□□□□ 0.29
PHGDH-220ENST00000641570 WWC1Q8IX03 1113 aa16.85■□□□□ 0.29
PHGDH-220ENST00000641570 ERVV-2B6SEH9 535 aa16.84■□□□□ 0.29
PHGDH-220ENST00000641570 GNAI1P63096 354 aa16.84■□□□□ 0.29
PHGDH-220ENST00000641570 DCTN1Q14203 1278 aa16.84■□□□□ 0.29
PHGDH-220ENST00000641570 TTC5Q8N0Z6 440 aa16.84■□□□□ 0.29
PHGDH-220ENST00000641570 RGS17Q9UGC6 210 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-220ENST00000641570 THSD7AQ9UPZ6 1657 aa16.84■□□□□ 0.29
PHGDH-220ENST00000641570 FAM196AQ6ZSG2 479 aa16.83■□□□□ 0.28
PHGDH-220ENST00000641570 RGS12O14924 1447 aa16.82■□□□□ 0.28
PHGDH-220ENST00000641570 BTBD11A6QL63 1104 aa16.82■□□□□ 0.28
PHGDH-220ENST00000641570 E9PSI1 815 aa16.82■□□□□ 0.28
PHGDH-220ENST00000641570 NKX1-1Q15270 411 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-220ENST00000641570 MARCH10Q8NA82 808 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-220ENST00000641570 TSPYL4Q9UJ04 414 aa16.82■□□□□ 0.28
PHGDH-220ENST00000641570 TRIM35Q9UPQ4 493 aa16.82■□□□□ 0.28
PHGDH-220ENST00000641570 IL16Q14005 1332 aa16.81■□□□□ 0.28
PHGDH-220ENST00000641570 TAF7Q15545 349 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-220ENST00000641570 ACSBG1Q96GR2 724 aa16.81■□□□□ 0.28
PHGDH-220ENST00000641570 THUMPD2Q9BTF0 503 aaKnown RBP16.81■□□□□ 0.28
PHGDH-220ENST00000641570 SLC52A2Q9HAB3 445 aa16.81■□□□□ 0.28
PHGDH-220ENST00000641570 IFT57Q9NWB7 429 aa16.81■□□□□ 0.28
PHGDH-220ENST00000641570 LGR6Q9HBX8 967 aa16.8■□□□□ 0.28
PHGDH-220ENST00000641570 SF3B2Q13435 895 aaKnown RBP16.79■□□□□ 0.28
PHGDH-220ENST00000641570 IL17REQ8NFR9 667 aa16.79■□□□□ 0.28
PHGDH-220ENST00000641570 CENPBP07199 599 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-220ENST00000641570 NFATC2IPQ8NCF5 419 aa16.78■□□□□ 0.28
PHGDH-220ENST00000641570 CFAP44Q96MT7 982 aa16.78■□□□□ 0.28
PHGDH-220ENST00000641570 BABAM1Q9NWV8 329 aa16.78■□□□□ 0.28
PHGDH-220ENST00000641570 KDM6AO15550 1401 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-220ENST00000641570 CEMIPQ8WUJ3 1361 aa16.77■□□□□ 0.28
PHGDH-220ENST00000641570 PRIM1P49642 420 aaKnown RBP16.77■□□□□ 0.28
PHGDH-220ENST00000641570 FAM182BQ5T319 152 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms