RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 ANKRD36BQ8N2N9 1353 aa14.02□□□□□ -0.17
PHGDH-212ENST00000641247 LTV1Q96GA3 475 aaPredicted RBP14.02□□□□□ -0.17
PHGDH-212ENST00000641247 QSER1Q2KHR3 1735 aa14.01□□□□□ -0.17
PHGDH-212ENST00000641247 FBLN1P23142 703 aa14.01□□□□□ -0.17
PHGDH-212ENST00000641247 COL13A1Q5TAT6 717 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-212ENST00000641247 QRICH2Q9H0J4 1663 aa14.01□□□□□ -0.17
PHGDH-212ENST00000641247 SBNO2Q9Y2G9 1366 aa14□□□□□ -0.17
PHGDH-212ENST00000641247 CD163L1Q9NR16 1453 aa13.99□□□□□ -0.17
PHGDH-212ENST00000641247 IGSF1Q8N6C5 1336 aa13.98□□□□□ -0.17
PHGDH-212ENST00000641247 HTRA3P83110 453 aa13.98□□□□□ -0.17
PHGDH-212ENST00000641247 IP6K1Q92551 441 aa13.98□□□□□ -0.17
PHGDH-212ENST00000641247 APLP1P51693 650 aa13.97□□□□□ -0.17
PHGDH-212ENST00000641247 CAPN15O75808 1086 aa13.96□□□□□ -0.17
PHGDH-212ENST00000641247 ZCRB1Q8TBF4 217 aaKnown RBP13.96□□□□□ -0.17
PHGDH-212ENST00000641247 L3MBTL2Q969R5 705 aa13.96□□□□□ -0.17
PHGDH-212ENST00000641247 LY75O60449 1722 aa13.95□□□□□ -0.18
PHGDH-212ENST00000641247 SLC12A5Q9H2X9 1139 aa13.95□□□□□ -0.18
PHGDH-212ENST00000641247 TOMM70O94826 608 aa13.94□□□□□ -0.18
PHGDH-212ENST00000641247 MEGF6O75095 1541 aa13.94□□□□□ -0.18
PHGDH-212ENST00000641247 USP47Q96K76 1375 aa13.94□□□□□ -0.18
PHGDH-212ENST00000641247 NMRK2Q9NPI5 230 aa13.93□□□□□ -0.18
PHGDH-212ENST00000641247 NBPF6Q5VWK0 638 aa13.92□□□□□ -0.18
PHGDH-212ENST00000641247 NBPF4Q96M43 638 aa13.92□□□□□ -0.18
PHGDH-212ENST00000641247 MAP3K19Q56UN5 1328 aa13.91□□□□□ -0.18
PHGDH-212ENST00000641247 KAT6BQ8WYB5 2073 aa13.91□□□□□ -0.18
PHGDH-212ENST00000641247 DOT1LQ8TEK3 1739 aa13.91□□□□□ -0.18
PHGDH-212ENST00000641247 PHF14O94880 888 aa13.91□□□□□ -0.18
PHGDH-212ENST00000641247 HOXC9P31274 260 aa13.91□□□□□ -0.18
PHGDH-212ENST00000641247 USHBP1Q8N6Y0 703 aa13.91□□□□□ -0.18
PHGDH-212ENST00000641247 TMC1Q8TDI8 760 aa13.91□□□□□ -0.18
PHGDH-212ENST00000641247 FLAD1Q8NFF5 587 aa13.9□□□□□ -0.18
PHGDH-212ENST00000641247 KLRG1Q96E93 195 aa13.9□□□□□ -0.18
PHGDH-212ENST00000641247 LTN1O94822 1766 aa13.89□□□□□ -0.19
PHGDH-212ENST00000641247 USP54Q70EL1 1684 aa13.89□□□□□ -0.19
PHGDH-212ENST00000641247 PALLDQ8WX93 1383 aa13.89□□□□□ -0.19
PHGDH-212ENST00000641247 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.89□□□□□ -0.19
PHGDH-212ENST00000641247 MPRIPQ6WCQ1 1025 aa13.89□□□□□ -0.19
PHGDH-212ENST00000641247 JMYQ8N9B5 988 aa13.89□□□□□ -0.19
PHGDH-212ENST00000641247 MON2Q7Z3U7 1717 aa13.89□□□□□ -0.19
PHGDH-212ENST00000641247 FAM208AQ9UK61 1670 aaKnown RBP13.88□□□□□ -0.19
PHGDH-212ENST00000641247 SIN3AQ96ST3 1273 aa13.88□□□□□ -0.19
PHGDH-212ENST00000641247 A0A1W2PP64 1363 aa13.87□□□□□ -0.19
PHGDH-212ENST00000641247 ROCK2O75116 1388 aaKnown RBP13.87□□□□□ -0.19
PHGDH-212ENST00000641247 A0A0G2JLW4 131 aa13.86□□□□□ -0.19
PHGDH-212ENST00000641247 AMPHP49418 695 aa13.86□□□□□ -0.19
PHGDH-212ENST00000641247 PRELPP51888 382 aa13.86□□□□□ -0.19
PHGDH-212ENST00000641247 TRIM26Q12899 539 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-212ENST00000641247 HDGFL2Q7Z4V5 671 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-212ENST00000641247 LINC00116Q8NCU8 138 aa13.86□□□□□ -0.19
PHGDH-212ENST00000641247 AK7Q96M32 723 aa13.86□□□□□ -0.19
PHGDH-212ENST00000641247 EDC4Q6P2E9 1401 aaKnown RBP13.86□□□□□ -0.19
PHGDH-212ENST00000641247 TOGARAM1Q9Y4F4 1720 aa13.85□□□□□ -0.19
PHGDH-212ENST00000641247 CYP27B1O15528 508 aa13.85□□□□□ -0.19
PHGDH-212ENST00000641247 RRS1Q15050 365 aaKnown RBP13.85□□□□□ -0.19
PHGDH-212ENST00000641247 TNS4Q8IZW8 715 aa13.85□□□□□ -0.19
PHGDH-212ENST00000641247 BCS1LQ9Y276 419 aa13.85□□□□□ -0.19
PHGDH-212ENST00000641247 PXDNLA1KZ92 1463 aa13.85□□□□□ -0.19
PHGDH-212ENST00000641247 CICQ96RK0 1608 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-212ENST00000641247 ITPK1Q13572 414 aa13.84□□□□□ -0.19
PHGDH-212ENST00000641247 ARHGAP27Q6ZUM4 889 aa13.84□□□□□ -0.19
PHGDH-212ENST00000641247 RBM46Q8TBY0 533 aaKnown RBP13.84□□□□□ -0.19
PHGDH-212ENST00000641247 PIGBQ92521 554 aa13.84□□□□□ -0.19
PHGDH-212ENST00000641247 C5P01031 1676 aa13.84□□□□□ -0.19
PHGDH-212ENST00000641247 MMP10P09238 476 aa13.83□□□□□ -0.2
PHGDH-212ENST00000641247 C4BP0C0L5 1744 aa13.82□□□□□ -0.2
PHGDH-212ENST00000641247 DPEP1P16444 411 aa13.82□□□□□ -0.2
PHGDH-212ENST00000641247 KCNA3P22001 575 aa13.82□□□□□ -0.2
PHGDH-212ENST00000641247 SSFA2P28290 1259 aa13.82□□□□□ -0.2
PHGDH-212ENST00000641247 RGPD2P0DJD1 1756 aa13.81□□□□□ -0.2
PHGDH-212ENST00000641247 TATP17735 454 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-212ENST00000641247 HSP90AB2PQ58FF8 381 aa13.81□□□□□ -0.2
PHGDH-212ENST00000641247 C9orf131Q5VYM1 1079 aa13.81□□□□□ -0.2
PHGDH-212ENST00000641247 COG3Q96JB2 828 aa13.81□□□□□ -0.2
PHGDH-212ENST00000641247 TERF2IPQ9NYB0 399 aa13.81□□□□□ -0.2
PHGDH-212ENST00000641247 LOC102724428A0A0B4J2F2 783 aa13.8□□□□□ -0.2
PHGDH-212ENST00000641247 SIK1P57059 783 aa13.8□□□□□ -0.2
PHGDH-212ENST00000641247 TGFB2P61812 414 aa13.8□□□□□ -0.2
PHGDH-212ENST00000641247 RAPGEF4Q8WZA2 1011 aa13.8□□□□□ -0.2
PHGDH-212ENST00000641247 RRAGCQ9HB90 399 aa13.8□□□□□ -0.2
PHGDH-212ENST00000641247 CGNL1Q0VF96 1302 aa13.8□□□□□ -0.2
PHGDH-212ENST00000641247 WDR90Q96KV7 1748 aa13.79□□□□□ -0.2
PHGDH-212ENST00000641247 GNPATO15228 680 aa13.79□□□□□ -0.2
PHGDH-212ENST00000641247 SMARCC1Q92922 1105 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-212ENST00000641247 PCGF6Q9BYE7 350 aa13.79□□□□□ -0.2
PHGDH-212ENST00000641247 ASAP1Q9ULH1 1129 aa13.79□□□□□ -0.2
PHGDH-212ENST00000641247 PCDH11XQ9BZA7 1347 aa13.79□□□□□ -0.2
PHGDH-212ENST00000641247 PCDH11YQ9BZA8 1340 aa13.79□□□□□ -0.2
PHGDH-212ENST00000641247 KIAA1551Q9HCM1 1747 aa13.78□□□□□ -0.2
PHGDH-212ENST00000641247 FCHSD2O94868 740 aa13.78□□□□□ -0.2
PHGDH-212ENST00000641247 FSTL1Q12841 308 aa13.78□□□□□ -0.2
PHGDH-212ENST00000641247 NEUROD1Q13562 356 aa13.78□□□□□ -0.2
PHGDH-212ENST00000641247 TAF1LQ8IZX4 1826 aa13.78□□□□□ -0.2
PHGDH-212ENST00000641247 NKX1-1Q15270 411 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-212ENST00000641247 SLC4A9Q96Q91 983 aa13.77□□□□□ -0.21
PHGDH-212ENST00000641247 NSD3Q9BZ95 1437 aa13.77□□□□□ -0.21
PHGDH-212ENST00000641247 KCPQ6ZWJ8 1503 aa13.76□□□□□ -0.21
PHGDH-212ENST00000641247 FYB1O15117 783 aa13.76□□□□□ -0.21
PHGDH-212ENST00000641247 ATP6V1AP38606 617 aa13.76□□□□□ -0.21
PHGDH-212ENST00000641247 GGNBP2Q9H3C7 697 aa13.76□□□□□ -0.21
PHGDH-212ENST00000641247 UBR3Q6ZT12 1888 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms