RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 NME9Q86XW9 330 aa25.39■■□□□ 1.66
VPS72-207ENST00000640458 SYTL4Q96C24 671 aaPredicted RBP25.39■■□□□ 1.66
VPS72-207ENST00000640458 TERF2IPQ9NYB0 399 aa25.39■■□□□ 1.66
VPS72-207ENST00000640458 CDCA8Q53HL2 280 aa25.38■■□□□ 1.65
VPS72-207ENST00000640458 QSER1Q2KHR3 1735 aa25.37■■□□□ 1.65
VPS72-207ENST00000640458 USP31Q70CQ4 1352 aa25.36■■□□□ 1.65
VPS72-207ENST00000640458 MSH5O43196 834 aa25.36■■□□□ 1.65
VPS72-207ENST00000640458 COL24A1Q17RW2 1714 aa25.35■■□□□ 1.65
VPS72-207ENST00000640458 GOLGB1Q14789 3259 aaKnown RBP25.35■■□□□ 1.65
VPS72-207ENST00000640458 A0A1W2PP64 1363 aa25.35■■□□□ 1.65
VPS72-207ENST00000640458 PRIM1P49642 420 aaKnown RBP25.35■■□□□ 1.65
VPS72-207ENST00000640458 LTN1O94822 1766 aa25.34■■□□□ 1.65
VPS72-207ENST00000640458 EIF4G2P78344 907 aaKnown RBP eCLIP25.34■■□□□ 1.65
VPS72-207ENST00000640458 MON2Q7Z3U7 1717 aa25.34■■□□□ 1.65
VPS72-207ENST00000640458 CEP350Q5VT06 3117 aa25.34■■□□□ 1.65
VPS72-207ENST00000640458 TUBGCP6Q96RT7 1819 aa25.33■■□□□ 1.65
VPS72-207ENST00000640458 EDC4Q6P2E9 1401 aaKnown RBP25.32■■□□□ 1.64
VPS72-207ENST00000640458 LTV1Q96GA3 475 aaPredicted RBP25.32■■□□□ 1.64
VPS72-207ENST00000640458 ATP10DQ9P241 1426 aa25.31■■□□□ 1.64
VPS72-207ENST00000640458 HSPA5P11021 654 aaKnown RBP25.3■■□□□ 1.64
VPS72-207ENST00000640458 MSL1Q68DK7 614 aa25.29■■□□□ 1.64
VPS72-207ENST00000640458 COL23A1Q86Y22 540 aaPredicted RBP25.29■■□□□ 1.64
VPS72-207ENST00000640458 GPBP1L1Q9HC44 474 aaPredicted RBP25.29■■□□□ 1.64
VPS72-207ENST00000640458 CCNL1Q9UK58 526 aaPredicted RBP25.29■■□□□ 1.64
VPS72-207ENST00000640458 ANKRD36BQ8N2N9 1353 aa25.29■■□□□ 1.64
VPS72-207ENST00000640458 USP54Q70EL1 1684 aa25.27■■□□□ 1.64
VPS72-207ENST00000640458 IP6K1Q92551 441 aa25.26■■□□□ 1.63
VPS72-207ENST00000640458 ZNF526Q8TF50 670 aaPredicted RBP25.25■■□□□ 1.63
VPS72-207ENST00000640458 NSD2O96028 1365 aa25.24■■□□□ 1.63
VPS72-207ENST00000640458 HSPA6P17066 643 aa25.23■■□□□ 1.63
VPS72-207ENST00000640458 LY75O60449 1722 aa25.23■■□□□ 1.63
VPS72-207ENST00000640458 DOT1LQ8TEK3 1739 aa25.23■■□□□ 1.63
VPS72-207ENST00000640458 ZCRB1Q8TBF4 217 aaKnown RBP25.22■■□□□ 1.63
VPS72-207ENST00000640458 CD2APQ9Y5K6 639 aa25.2■■□□□ 1.62
VPS72-207ENST00000640458 FAM208AQ9UK61 1670 aaKnown RBP25.17■■□□□ 1.62
VPS72-207ENST00000640458 AMPHP49418 695 aa25.15■■□□□ 1.62
VPS72-207ENST00000640458 COG3Q96JB2 828 aa25.15■■□□□ 1.62
VPS72-207ENST00000640458 CARD14Q9BXL6 1004 aa25.15■■□□□ 1.62
VPS72-207ENST00000640458 WWC3Q9ULE0 1092 aa25.15■■□□□ 1.62
VPS72-207ENST00000640458 FYB1O15117 783 aa25.14■■□□□ 1.62
VPS72-207ENST00000640458 HOXC9P31274 260 aa25.14■■□□□ 1.62
VPS72-207ENST00000640458 POLR3GLQ9BT43 218 aa25.14■■□□□ 1.62
VPS72-207ENST00000640458 ADCY9O60503 1353 aa25.14■■□□□ 1.61
VPS72-207ENST00000640458 MAP3K19Q56UN5 1328 aa25.13■■□□□ 1.61
VPS72-207ENST00000640458 MEGF6O75095 1541 aa25.13■■□□□ 1.61
VPS72-207ENST00000640458 FBLN1P23142 703 aa25.13■■□□□ 1.61
VPS72-207ENST00000640458 FLAD1Q8NFF5 587 aa25.12■■□□□ 1.61
VPS72-207ENST00000640458 ZEB1P37275 1124 aaPredicted RBP25.1■■□□□ 1.61
VPS72-207ENST00000640458 RGPD2P0DJD1 1756 aa25.1■■□□□ 1.61
VPS72-207ENST00000640458 USHBP1Q8N6Y0 703 aa25.09■■□□□ 1.61
VPS72-207ENST00000640458 GGNBP2Q9H3C7 697 aa25.09■■□□□ 1.61
VPS72-207ENST00000640458 NSD3Q9BZ95 1437 aa25.09■■□□□ 1.61
VPS72-207ENST00000640458 C5P01031 1676 aa25.08■■□□□ 1.61
VPS72-207ENST00000640458 IGSF1Q8N6C5 1336 aa25.08■■□□□ 1.6
VPS72-207ENST00000640458 NBPF6Q5VWK0 638 aa25.07■■□□□ 1.6
VPS72-207ENST00000640458 NBPF4Q96M43 638 aa25.07■■□□□ 1.6
VPS72-207ENST00000640458 HMGB2P26583 209 aaKnown RBP25.06■■□□□ 1.6
VPS72-207ENST00000640458 RAPGEF4Q8WZA2 1011 aa25.06■■□□□ 1.6
VPS72-207ENST00000640458 PALLDQ8WX93 1383 aa25.05■■□□□ 1.6
VPS72-207ENST00000640458 MPRIPQ6WCQ1 1025 aa25.05■■□□□ 1.6
VPS72-207ENST00000640458 AK7Q96M32 723 aa25.05■■□□□ 1.6
VPS72-207ENST00000640458 KIF3CO14782 793 aa25.04■■□□□ 1.6
VPS72-207ENST00000640458 PHF14O94880 888 aa25.04■■□□□ 1.6
VPS72-207ENST00000640458 CGNL1Q0VF96 1302 aa25.04■■□□□ 1.6
VPS72-207ENST00000640458 SMIM5Q71RC9 77 aa25.03■■□□□ 1.6
VPS72-207ENST00000640458 PANK3Q9H999 370 aa25.03■■□□□ 1.6
VPS72-207ENST00000640458 TATP17735 454 aaPredicted RBP25.02■■□□□ 1.6
VPS72-207ENST00000640458 RRS1Q15050 365 aaKnown RBP25.02■■□□□ 1.6
VPS72-207ENST00000640458 AMIGO3Q86WK7 504 aa25.02■■□□□ 1.6
VPS72-207ENST00000640458 KIF7Q2M1P5 1343 aa25.01■■□□□ 1.59
VPS72-207ENST00000640458 TAF1LQ8IZX4 1826 aa25■■□□□ 1.59
VPS72-207ENST00000640458 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.99■■□□□ 1.59
VPS72-207ENST00000640458 APLP1P51693 650 aa24.99■■□□□ 1.59
VPS72-207ENST00000640458 PCDH11XQ9BZA7 1347 aa24.99■■□□□ 1.59
VPS72-207ENST00000640458 PCDH11YQ9BZA8 1340 aa24.99■■□□□ 1.59
VPS72-207ENST00000640458 SMARCC1Q92922 1105 aaPredicted RBP24.98■■□□□ 1.59
VPS72-207ENST00000640458 KIF20BQ96Q89 1820 aa24.98■■□□□ 1.59
VPS72-207ENST00000640458 C4BP0C0L5 1744 aa24.98■■□□□ 1.59
VPS72-207ENST00000640458 RTL1A6NKG5 1358 aa24.97■■□□□ 1.59
VPS72-207ENST00000640458 SMG6Q86US8 1419 aaKnown RBP24.96■■□□□ 1.59
VPS72-207ENST00000640458 CYP27B1O15528 508 aa24.94■■□□□ 1.58
VPS72-207ENST00000640458 TOGARAM1Q9Y4F4 1720 aa24.93■■□□□ 1.58
VPS72-207ENST00000640458 UBR3Q6ZT12 1888 aa24.92■■□□□ 1.58
VPS72-207ENST00000640458 SSFA2P28290 1259 aa24.92■■□□□ 1.58
VPS72-207ENST00000640458 DNAJC5GQ8N7S2 189 aa24.92■■□□□ 1.58
VPS72-207ENST00000640458 PIGBQ92521 554 aa24.92■■□□□ 1.58
VPS72-207ENST00000640458 KIF24Q5T7B8 1368 aa24.92■■□□□ 1.58
VPS72-207ENST00000640458 TOMM70O94826 608 aa24.91■■□□□ 1.58
VPS72-207ENST00000640458 HSP90AB2PQ58FF8 381 aa24.91■■□□□ 1.58
VPS72-207ENST00000640458 LINC00116Q8NCU8 138 aa24.9■■□□□ 1.58
VPS72-207ENST00000640458 ITGB4P16144 1822 aa24.89■■□□□ 1.57
VPS72-207ENST00000640458 LOC102724428A0A0B4J2F2 783 aa24.88■■□□□ 1.57
VPS72-207ENST00000640458 GNPATO15228 680 aa24.88■■□□□ 1.57
VPS72-207ENST00000640458 SIK1P57059 783 aa24.88■■□□□ 1.57
VPS72-207ENST00000640458 BCS1LQ9Y276 419 aa24.88■■□□□ 1.57
VPS72-207ENST00000640458 KNSTRNQ9Y448 316 aa24.88■■□□□ 1.57
VPS72-207ENST00000640458 WASHC2AQ641Q2 1341 aa24.87■■□□□ 1.57
VPS72-207ENST00000640458 MMP10P09238 476 aa24.87■■□□□ 1.57
VPS72-207ENST00000640458 INSRP06213 1382 aa24.87■■□□□ 1.57
VPS72-207ENST00000640458 FLT4P35916 1363 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms