RNA–Protein interactions for RNA: ENST00000640360.1

SLC35A3-220, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5

Gene SLC35A3, Length 4,437 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-220ENST00000640360 PRAMEF22A3QJZ6 481 aa13.02□□□□□ -0.33
SLC35A3-220ENST00000640360 PCNTO95613 3336 aa13.02□□□□□ -0.33
SLC35A3-220ENST00000640360 PPLO60437 1756 aa13.01□□□□□ -0.33
SLC35A3-220ENST00000640360 FSD2A1L4K1 749 aa13.01□□□□□ -0.33
SLC35A3-220ENST00000640360 RBM25P49756 843 aaKnown RBP13.01□□□□□ -0.33
SLC35A3-220ENST00000640360 TRIM44Q96DX7 344 aaPredicted RBP13.01□□□□□ -0.33
SLC35A3-220ENST00000640360 ZNF830Q96NB3 372 aaPredicted RBP13.01□□□□□ -0.33
SLC35A3-220ENST00000640360 COL3A1P02461 1466 aaPredicted RBP13.01□□□□□ -0.33
SLC35A3-220ENST00000640360 CDC45O75419 566 aa13.01□□□□□ -0.33
SLC35A3-220ENST00000640360 NLRP6P59044 892 aa13.01□□□□□ -0.33
SLC35A3-220ENST00000640360 NDUFB9Q9Y6M9 179 aa13.01□□□□□ -0.33
SLC35A3-220ENST00000640360 SYCE3A1L190 88 aa13.01□□□□□ -0.33
SLC35A3-220ENST00000640360 TSC1Q92574 1164 aa13□□□□□ -0.33
SLC35A3-220ENST00000640360 CHGBP05060 677 aa13□□□□□ -0.33
SLC35A3-220ENST00000640360 PRIM1P49642 420 aaKnown RBP13□□□□□ -0.33
SLC35A3-220ENST00000640360 TTC22Q5TAA0 569 aa13□□□□□ -0.33
SLC35A3-220ENST00000640360 LRRFIP2Q9Y608 721 aaKnown RBP13□□□□□ -0.33
SLC35A3-220ENST00000640360 IFT57Q9NWB7 429 aa13□□□□□ -0.33
SLC35A3-220ENST00000640360 ARHGEF28Q8N1W1 1705 aaKnown RBP13□□□□□ -0.33
SLC35A3-220ENST00000640360 RAB3GAP1Q15042 981 aa12.99□□□□□ -0.33
SLC35A3-220ENST00000640360 ALDH1L2Q3SY69 923 aa12.99□□□□□ -0.33
SLC35A3-220ENST00000640360 C17orf53Q8N3J3 647 aaPredicted RBP12.99□□□□□ -0.33
SLC35A3-220ENST00000640360 USP26Q9BXU7 913 aa12.99□□□□□ -0.33
SLC35A3-220ENST00000640360 ZDHHC9Q9Y397 364 aa12.99□□□□□ -0.33
SLC35A3-220ENST00000640360 L1TD1Q5T7N2 865 aaKnown RBP12.99□□□□□ -0.33
SLC35A3-220ENST00000640360 LRRC59Q96AG4 307 aaKnown RBP12.99□□□□□ -0.33
SLC35A3-220ENST00000640360 EYA1Q99502 592 aa12.99□□□□□ -0.33
SLC35A3-220ENST00000640360 SPG7Q9UQ90 795 aa12.99□□□□□ -0.33
SLC35A3-220ENST00000640360 NINLQ9Y2I6 1382 aa12.99□□□□□ -0.33
SLC35A3-220ENST00000640360 ZNF853P0CG23 659 aa12.99□□□□□ -0.33
SLC35A3-220ENST00000640360 RTF1Q92541 710 aaKnown RBP12.99□□□□□ -0.33
SLC35A3-220ENST00000640360 PIK3C2BO00750 1634 aa12.99□□□□□ -0.33
SLC35A3-220ENST00000640360 ESPNB1AK53 854 aa12.98□□□□□ -0.33
SLC35A3-220ENST00000640360 RBSNQ9H1K0 784 aa12.98□□□□□ -0.33
SLC35A3-220ENST00000640360 DCTPP1Q9H773 170 aa12.98□□□□□ -0.33
SLC35A3-220ENST00000640360 LGR6Q9HBX8 967 aa12.98□□□□□ -0.33
SLC35A3-220ENST00000640360 ROBO2Q9HCK4 1378 aa12.98□□□□□ -0.33
SLC35A3-220ENST00000640360 ABCC4O15439 1325 aa12.98□□□□□ -0.33
SLC35A3-220ENST00000640360 GPT2Q8TD30 523 aa12.97□□□□□ -0.33
SLC35A3-220ENST00000640360 ZC3H13Q5T200 1668 aaKnown RBP12.97□□□□□ -0.33
SLC35A3-220ENST00000640360 FAM135BQ49AJ0 1406 aa12.97□□□□□ -0.33
SLC35A3-220ENST00000640360 GADD45BO75293 160 aaPredicted RBP12.97□□□□□ -0.33
SLC35A3-220ENST00000640360 AIMP1Q12904 312 aaKnown RBP12.97□□□□□ -0.33
SLC35A3-220ENST00000640360 KLHDC4Q8TBB5 520 aa12.97□□□□□ -0.33
SLC35A3-220ENST00000640360 GCC1Q96CN9 775 aa12.97□□□□□ -0.33
SLC35A3-220ENST00000640360 RIMS2Q9UQ26 1411 aa12.97□□□□□ -0.33
SLC35A3-220ENST00000640360 DDIT3P35638 169 aa12.97□□□□□ -0.33
SLC35A3-220ENST00000640360 NASPP49321 788 aaPredicted RBP12.97□□□□□ -0.33
SLC35A3-220ENST00000640360 IFT172Q9UG01 1749 aa12.97□□□□□ -0.33
SLC35A3-220ENST00000640360 PA2G4Q9UQ80 394 aaKnown RBP12.96□□□□□ -0.33
SLC35A3-220ENST00000640360 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.96□□□□□ -0.33
SLC35A3-220ENST00000640360 TTC21BQ7Z4L5 1316 aa12.96□□□□□ -0.33
SLC35A3-220ENST00000640360 FAM173BQ6P4H8 233 aa12.96□□□□□ -0.33
SLC35A3-220ENST00000640360 NBPF7P0C2Y1 421 aaPredicted RBP12.96□□□□□ -0.34
SLC35A3-220ENST00000640360 GBP4Q96PP9 640 aa12.96□□□□□ -0.34
SLC35A3-220ENST00000640360 MPRIPQ6WCQ1 1025 aa12.95□□□□□ -0.34
SLC35A3-220ENST00000640360 MYO3AQ8NEV4 1616 aa12.95□□□□□ -0.34
SLC35A3-220ENST00000640360 FOSBP53539 338 aa12.95□□□□□ -0.34
SLC35A3-220ENST00000640360 API5Q9BZZ5 524 aaKnown RBP12.95□□□□□ -0.34
SLC35A3-220ENST00000640360 TMEM63CQ9P1W3 806 aa12.95□□□□□ -0.34
SLC35A3-220ENST00000640360 PNPLA6Q8IY17 1366 aa12.95□□□□□ -0.34
SLC35A3-220ENST00000640360 MRE11P49959 708 aa12.95□□□□□ -0.34
SLC35A3-220ENST00000640360 PDE1AP54750 535 aa12.95□□□□□ -0.34
SLC35A3-220ENST00000640360 ANKRD44Q8N8A2 993 aa12.95□□□□□ -0.34
SLC35A3-220ENST00000640360 SIL1Q9H173 461 aa12.95□□□□□ -0.34
SLC35A3-220ENST00000640360 SURF6O75683 361 aaKnown RBP12.94□□□□□ -0.34
SLC35A3-220ENST00000640360 CWC27Q6UX04 472 aaKnown RBP12.94□□□□□ -0.34
SLC35A3-220ENST00000640360 DDX17Q92841 729 aaKnown RBP12.94□□□□□ -0.34
SLC35A3-220ENST00000640360 RTL1A6NKG5 1358 aa12.94□□□□□ -0.34
SLC35A3-220ENST00000640360 DDX11L8A8MPP1 907 aa12.94□□□□□ -0.34
SLC35A3-220ENST00000640360 AMOTL2Q9Y2J4 779 aa12.94□□□□□ -0.34
SLC35A3-220ENST00000640360 ARHGEF40Q8TER5 1519 aa12.94□□□□□ -0.34
SLC35A3-220ENST00000640360 RIMS1Q86UR5 1692 aaKnown RBP12.94□□□□□ -0.34
SLC35A3-220ENST00000640360 CHL1O00533 1208 aa12.93□□□□□ -0.34
SLC35A3-220ENST00000640360 ABTB2Q8N961 1025 aa12.93□□□□□ -0.34
SLC35A3-220ENST00000640360 CALD1Q05682 793 aaKnown RBP12.93□□□□□ -0.34
SLC35A3-220ENST00000640360 IL16Q14005 1332 aa12.93□□□□□ -0.34
SLC35A3-220ENST00000640360 ZSCAN23Q3MJ62 389 aa12.93□□□□□ -0.34
SLC35A3-220ENST00000640360 IL17REQ8NFR9 667 aa12.93□□□□□ -0.34
SLC35A3-220ENST00000640360 ALKQ9UM73 1620 aa12.93□□□□□ -0.34
SLC35A3-220ENST00000640360 FLIIQ13045 1269 aa12.93□□□□□ -0.34
SLC35A3-220ENST00000640360 EDC3Q96F86 508 aaKnown RBP12.93□□□□□ -0.34
SLC35A3-220ENST00000640360 TMX3Q96JJ7 454 aa12.93□□□□□ -0.34
SLC35A3-220ENST00000640360 SLFNL1Q499Z3 407 aa12.92□□□□□ -0.34
SLC35A3-220ENST00000640360 CT47B1P0C2W7 299 aaPredicted RBP12.92□□□□□ -0.34
SLC35A3-220ENST00000640360 VSIG10Q8N0Z9 540 aa12.92□□□□□ -0.34
SLC35A3-220ENST00000640360 LMBRD1Q9NUN5 540 aa12.92□□□□□ -0.34
SLC35A3-220ENST00000640360 HECW2Q9P2P5 1572 aa12.92□□□□□ -0.34
SLC35A3-220ENST00000640360 NSD2O96028 1365 aa12.92□□□□□ -0.34
SLC35A3-220ENST00000640360 VIRMAQ69YN4 1812 aaKnown RBP12.92□□□□□ -0.34
SLC35A3-220ENST00000640360 MED14O60244 1454 aa12.92□□□□□ -0.34
SLC35A3-220ENST00000640360 MLH3Q9UHC1 1453 aa12.92□□□□□ -0.34
SLC35A3-220ENST00000640360 FERMT3Q86UX7 667 aa12.91□□□□□ -0.34
SLC35A3-220ENST00000640360 R3HCC1Q9Y3T6 440 aaKnown RBP12.91□□□□□ -0.34
SLC35A3-220ENST00000640360 KIAA1210Q9ULL0 1709 aa12.91□□□□□ -0.34
SLC35A3-220ENST00000640360 CWF19L2Q2TBE0 894 aaKnown RBP12.91□□□□□ -0.34
SLC35A3-220ENST00000640360 INTS3Q68E01 1043 aaKnown RBP12.91□□□□□ -0.34
SLC35A3-220ENST00000640360 PROSER3Q2NL68 480 aa12.91□□□□□ -0.34
SLC35A3-220ENST00000640360 KNDC1Q76NI1 1749 aa12.9□□□□□ -0.34
SLC35A3-220ENST00000640360 TAF7Q15545 349 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms