RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 SEMA3FQ13275 785 aa10.62□□□□□ -0.71
CCDC7-216ENST00000640058 RNF135Q8IUD6 432 aa10.62□□□□□ -0.71
CCDC7-216ENST00000640058 H3BM21 787 aa10.61□□□□□ -0.71
CCDC7-216ENST00000640058 MEN1O00255 615 aa10.61□□□□□ -0.71
CCDC7-216ENST00000640058 FOXD4L5Q5VV16 416 aaPredicted RBP10.61□□□□□ -0.71
CCDC7-216ENST00000640058 RNF217Q8TC41 542 aa10.61□□□□□ -0.71
CCDC7-216ENST00000640058 OSBPL3Q9H4L5 887 aa10.61□□□□□ -0.71
CCDC7-216ENST00000640058 CYP2U1Q7Z449 544 aa10.6□□□□□ -0.71
CCDC7-216ENST00000640058 WWC1Q8IX03 1113 aa10.6□□□□□ -0.71
CCDC7-216ENST00000640058 DOLKQ9UPQ8 538 aa10.6□□□□□ -0.71
CCDC7-216ENST00000640058 A0A1W2PRU2 124 aa10.59□□□□□ -0.71
CCDC7-216ENST00000640058 PTSQ03393 145 aa10.59□□□□□ -0.71
CCDC7-216ENST00000640058 OXLD1Q5BKU9 147 aa10.59□□□□□ -0.71
CCDC7-216ENST00000640058 PHTF2Q8N3S3 785 aa10.59□□□□□ -0.71
CCDC7-216ENST00000640058 ARHGEF10LQ9HCE6 1279 aa10.59□□□□□ -0.71
CCDC7-216ENST00000640058 RAB6BQ9NRW1 208 aa10.59□□□□□ -0.71
CCDC7-216ENST00000640058 ERBB4Q15303 1308 aa10.58□□□□□ -0.71
CCDC7-216ENST00000640058 PPFIA3O75145 1194 aa10.58□□□□□ -0.72
CCDC7-216ENST00000640058 MYCP01106 439 aaPredicted RBP10.58□□□□□ -0.72
CCDC7-216ENST00000640058 NPAS3Q8IXF0 933 aa10.58□□□□□ -0.72
CCDC7-216ENST00000640058 POM121CA8CG34 1229 aa10.57□□□□□ -0.72
CCDC7-216ENST00000640058 TRAK2O60296 914 aa10.57□□□□□ -0.72
CCDC7-216ENST00000640058 CLUAP1Q96AJ1 413 aa10.57□□□□□ -0.72
CCDC7-216ENST00000640058 PIK3CDO00329 1044 aa10.56□□□□□ -0.72
CCDC7-216ENST00000640058 SOX11P35716 441 aa10.56□□□□□ -0.72
CCDC7-216ENST00000640058 PRICKLE2Q7Z3G6 844 aa10.56□□□□□ -0.72
CCDC7-216ENST00000640058 IRF7Q92985 503 aa10.56□□□□□ -0.72
CCDC7-216ENST00000640058 RHOQP17081 205 aa10.55□□□□□ -0.72
CCDC7-216ENST00000640058 GMPRP36959 345 aa10.55□□□□□ -0.72
CCDC7-216ENST00000640058 LYSMD3Q7Z3D4 306 aa10.55□□□□□ -0.72
CCDC7-216ENST00000640058 NLRP3Q96P20 1036 aa10.55□□□□□ -0.72
CCDC7-216ENST00000640058 CCDC155Q8N6L0 562 aa10.54□□□□□ -0.72
CCDC7-216ENST00000640058 PLPP7Q8NBV4 271 aa10.54□□□□□ -0.72
CCDC7-216ENST00000640058 STAU1O95793 577 aaKnown RBP10.53□□□□□ -0.72
CCDC7-216ENST00000640058 RNF144AP50876 292 aaPredicted RBP10.53□□□□□ -0.72
CCDC7-216ENST00000640058 SLC27A3Q5K4L6 730 aa10.52□□□□□ -0.73
CCDC7-216ENST00000640058 ALG2Q9H553 416 aa10.52□□□□□ -0.73
CCDC7-216ENST00000640058 SLC35F4A4IF30 521 aa10.51□□□□□ -0.73
CCDC7-216ENST00000640058 USP4Q13107 963 aa10.51□□□□□ -0.73
CCDC7-216ENST00000640058 CLN3Q13286 438 aa10.51□□□□□ -0.73
CCDC7-216ENST00000640058 CHIC2Q9UKJ5 165 aa10.51□□□□□ -0.73
CCDC7-216ENST00000640058 GNRH1P01148 92 aa10.5□□□□□ -0.73
CCDC7-216ENST00000640058 IL2RAP01589 272 aa10.5□□□□□ -0.73
CCDC7-216ENST00000640058 SKIP12755 728 aa10.5□□□□□ -0.73
CCDC7-216ENST00000640058 ADAMTS19Q8TE59 1207 aa10.5□□□□□ -0.73
CCDC7-216ENST00000640058 SENP3-EIF4A1A0A087X0R7 540 aa10.49□□□□□ -0.73
CCDC7-216ENST00000640058 WIPF1O43516 503 aa10.49□□□□□ -0.73
CCDC7-216ENST00000640058 GPC1P35052 558 aa10.49□□□□□ -0.73
CCDC7-216ENST00000640058 CNKSR1Q969H4 720 aa10.49□□□□□ -0.73
CCDC7-216ENST00000640058 POU4F2Q12837 409 aa10.48□□□□□ -0.73
CCDC7-216ENST00000640058 MAP7D1Q3KQU3 841 aa10.48□□□□□ -0.73
CCDC7-216ENST00000640058 PROSER2Q86WR7 435 aaPredicted RBP10.48□□□□□ -0.73
CCDC7-216ENST00000640058 CDC14CA4D256 554 aa10.47□□□□□ -0.73
CCDC7-216ENST00000640058 VSIG8P0DPA2 414 aa10.47□□□□□ -0.73
CCDC7-216ENST00000640058 SIRT1Q96EB6 747 aa10.47□□□□□ -0.73
CCDC7-216ENST00000640058 ESYT1Q9BSJ8 1104 aa10.47□□□□□ -0.73
CCDC7-216ENST00000640058 ITGA6P23229 1130 aa10.46□□□□□ -0.73
CCDC7-216ENST00000640058 HDGFL1Q5TGJ6 251 aa10.46□□□□□ -0.73
CCDC7-216ENST00000640058 DEPDC4Q8N2C3 294 aa10.46□□□□□ -0.73
CCDC7-216ENST00000640058 GRIP2Q9C0E4 1043 aa10.46□□□□□ -0.73
CCDC7-216ENST00000640058 ETNK1Q9HBU6 452 aa10.46□□□□□ -0.73
CCDC7-216ENST00000640058 CENPCQ03188 943 aa10.45□□□□□ -0.74
CCDC7-216ENST00000640058 VWA5B2Q8N398 1253 aa10.45□□□□□ -0.74
CCDC7-216ENST00000640058 ESCO1Q5FWF5 840 aa10.44□□□□□ -0.74
CCDC7-216ENST00000640058 GPR161Q8N6U8 529 aaKnown RBP10.44□□□□□ -0.74
CCDC7-216ENST00000640058 XAGE2Q96GT9 111 aa10.44□□□□□ -0.74
CCDC7-216ENST00000640058 INSM1Q01101 510 aaPredicted RBP10.43□□□□□ -0.74
CCDC7-216ENST00000640058 NCOA4Q13772 614 aa10.43□□□□□ -0.74
CCDC7-216ENST00000640058 EML3Q32P44 896 aa10.43□□□□□ -0.74
CCDC7-216ENST00000640058 NBPF10Q6P3W6 841 aaKnown RBP10.43□□□□□ -0.74
CCDC7-216ENST00000640058 FNBP4Q8N3X1 1017 aaPredicted RBP10.43□□□□□ -0.74
CCDC7-216ENST00000640058 NBPF15Q8N660 670 aa10.43□□□□□ -0.74
CCDC7-216ENST00000640058 ZSCAN10Q96SZ4 725 aaPredicted RBP10.43□□□□□ -0.74
CCDC7-216ENST00000640058 CUEDC1Q9NWM3 386 aaPredicted RBP10.43□□□□□ -0.74
CCDC7-216ENST00000640058 USP17L5A8MUK1 530 aa10.42□□□□□ -0.74
CCDC7-216ENST00000640058 PHKA2P46019 1235 aa10.42□□□□□ -0.74
CCDC7-216ENST00000640058 SCNN1DP51172 638 aa10.42□□□□□ -0.74
CCDC7-216ENST00000640058 GDF10P55107 478 aa10.42□□□□□ -0.74
CCDC7-216ENST00000640058 RIPOR1Q6ZS17 1223 aa10.42□□□□□ -0.74
CCDC7-216ENST00000640058 UCN2Q96RP3 112 aa10.42□□□□□ -0.74
CCDC7-216ENST00000640058 GAS2L1Q99501 681 aaPredicted RBP10.42□□□□□ -0.74
CCDC7-216ENST00000640058 WASLO00401 505 aaPredicted RBP10.41□□□□□ -0.74
CCDC7-216ENST00000640058 TLR1Q15399 786 aa10.41□□□□□ -0.74
CCDC7-216ENST00000640058 TBC1D9Q6ZT07 1266 aa10.41□□□□□ -0.74
CCDC7-216ENST00000640058 TAS1R3Q7RTX0 852 aa10.41□□□□□ -0.74
CCDC7-216ENST00000640058 GLMNQ92990 594 aa10.41□□□□□ -0.74
CCDC7-216ENST00000640058 FHDC1Q9C0D6 1143 aaPredicted RBP10.41□□□□□ -0.74
CCDC7-216ENST00000640058 HRH3Q9Y5N1 445 aa10.41□□□□□ -0.74
CCDC7-216ENST00000640058 SPATA31C2B4DYI2 1134 aa10.4□□□□□ -0.74
CCDC7-216ENST00000640058 PSME1Q06323 249 aa10.4□□□□□ -0.74
CCDC7-216ENST00000640058 TMEM214Q6NUQ4 689 aaKnown RBP10.4□□□□□ -0.74
CCDC7-216ENST00000640058 SV2AQ7L0J3 742 aa10.4□□□□□ -0.74
CCDC7-216ENST00000640058 TIMMDC1Q9NPL8 285 aa10.4□□□□□ -0.74
CCDC7-216ENST00000640058 SERTAD1Q9UHV2 236 aa10.4□□□□□ -0.74
CCDC7-216ENST00000640058 NOD1Q9Y239 953 aa10.4□□□□□ -0.74
CCDC7-216ENST00000640058 GTF2E1P29083 439 aaPredicted RBP10.39□□□□□ -0.75
CCDC7-216ENST00000640058 NFATC2IPQ8NCF5 419 aa10.39□□□□□ -0.75
CCDC7-216ENST00000640058 NANOS1Q8WY41 292 aaKnown RBP10.39□□□□□ -0.75
CCDC7-216ENST00000640058 COL25A1Q9BXS0 654 aaPredicted RBP10.39□□□□□ -0.75
CCDC7-216ENST00000640058 A6NJR5 290 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms