RNA–Protein interactions for RNA: ENST00000639871.1

VPS51-217, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5 BASIC

Gene VPS51, Length 243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-217ENST00000639871 SMG6Q86US8 1419 aaKnown RBP24.42■■□□□ 1.5
VPS51-217ENST00000639871 KIF20BQ96Q89 1820 aa24.42■■□□□ 1.5
VPS51-217ENST00000639871 RGPD2P0DJD1 1756 aa24.42■■□□□ 1.5
VPS51-217ENST00000639871 SHANK3Q9BYB0 1731 aa24.41■■□□□ 1.5
VPS51-217ENST00000639871 ZBTB7AO95365 584 aa24.41■■□□□ 1.5
VPS51-217ENST00000639871 PRIM1P49642 420 aaKnown RBP24.4■■□□□ 1.5
VPS51-217ENST00000639871 SLC27A3Q5K4L6 730 aa24.4■■□□□ 1.5
VPS51-217ENST00000639871 SGIP1Q9BQI5 828 aa24.4■■□□□ 1.5
VPS51-217ENST00000639871 ZNF827Q17R98 1081 aa24.39■■□□□ 1.49
VPS51-217ENST00000639871 USHBP1Q8N6Y0 703 aa24.39■■□□□ 1.49
VPS51-217ENST00000639871 NCAPD2Q15021 1401 aa24.38■■□□□ 1.49
VPS51-217ENST00000639871 AKT1S1Q96B36 256 aa24.38■■□□□ 1.49
VPS51-217ENST00000639871 MTFR1LQ9H019 292 aa24.38■■□□□ 1.49
VPS51-217ENST00000639871 EMILIN1Q9Y6C2 1016 aa24.38■■□□□ 1.49
VPS51-217ENST00000639871 RAPGEF4Q8WZA2 1011 aa24.37■■□□□ 1.49
VPS51-217ENST00000639871 ATF5Q9Y2D1 282 aaPredicted RBP24.36■■□□□ 1.49
VPS51-217ENST00000639871 WASHC2AQ641Q2 1341 aa24.35■■□□□ 1.49
VPS51-217ENST00000639871 TATP17735 454 aaPredicted RBP24.34■■□□□ 1.49
VPS51-217ENST00000639871 EIF4G2P78344 907 aaKnown RBP eCLIP24.34■■□□□ 1.49
VPS51-217ENST00000639871 DOT1LQ8TEK3 1739 aa24.33■■□□□ 1.49
VPS51-217ENST00000639871 SYTL4Q96C24 671 aaPredicted RBP24.33■■□□□ 1.49
VPS51-217ENST00000639871 ANKRD26Q9UPS8 1709 aa24.32■■□□□ 1.48
VPS51-217ENST00000639871 HSPA5P11021 654 aaKnown RBP24.32■■□□□ 1.48
VPS51-217ENST00000639871 PCDH11XQ9BZA7 1347 aa24.32■■□□□ 1.48
VPS51-217ENST00000639871 PCDH11YQ9BZA8 1340 aa24.32■■□□□ 1.48
VPS51-217ENST00000639871 POLKQ9UBT6 870 aa24.31■■□□□ 1.48
VPS51-217ENST00000639871 CYP27B1O15528 508 aa24.3■■□□□ 1.48
VPS51-217ENST00000639871 LY75O60449 1722 aa24.29■■□□□ 1.48
VPS51-217ENST00000639871 KAT6BQ8WYB5 2073 aa24.28■■□□□ 1.48
VPS51-217ENST00000639871 KCNQ4P56696 695 aa24.28■■□□□ 1.48
VPS51-217ENST00000639871 CCER1Q8TC90 406 aaPredicted RBP24.28■■□□□ 1.48
VPS51-217ENST00000639871 SLC16A10Q8TF71 515 aa24.28■■□□□ 1.48
VPS51-217ENST00000639871 SYT17Q9BSW7 474 aa24.27■■□□□ 1.48
VPS51-217ENST00000639871 PNPLA7Q6ZV29 1317 aa24.27■■□□□ 1.48
VPS51-217ENST00000639871 PPM1GO15355 546 aaPredicted RBP24.26■■□□□ 1.47
VPS51-217ENST00000639871 NKX1-1Q15270 411 aaPredicted RBP24.26■■□□□ 1.47
VPS51-217ENST00000639871 EYA1Q99502 592 aa24.26■■□□□ 1.47
VPS51-217ENST00000639871 FHDC1Q9C0D6 1143 aaPredicted RBP24.26■■□□□ 1.47
VPS51-217ENST00000639871 QSER1Q2KHR3 1735 aa24.26■■□□□ 1.47
VPS51-217ENST00000639871 MAP3K5Q99683 1374 aa24.26■■□□□ 1.47
VPS51-217ENST00000639871 CCNL1Q9UK58 526 aaPredicted RBP24.25■■□□□ 1.47
VPS51-217ENST00000639871 ARXQ96QS3 562 aa24.24■■□□□ 1.47
VPS51-217ENST00000639871 PANK3Q9H999 370 aa24.24■■□□□ 1.47
VPS51-217ENST00000639871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.24■■□□□ 1.47
VPS51-217ENST00000639871 PKD1L3Q7Z443 1732 aa24.24■■□□□ 1.47
VPS51-217ENST00000639871 POLR3GLQ9BT43 218 aa24.22■■□□□ 1.47
VPS51-217ENST00000639871 TFCP2L1Q9NZI6 479 aa24.22■■□□□ 1.47
VPS51-217ENST00000639871 UTRNP46939 3433 aa24.22■■□□□ 1.47
VPS51-217ENST00000639871 PLEKHG2Q9H7P9 1386 aa24.21■■□□□ 1.47
VPS51-217ENST00000639871 DCAF8L1A6NGE4 600 aa24.21■■□□□ 1.47
VPS51-217ENST00000639871 COL24A1Q17RW2 1714 aa24.21■■□□□ 1.47
VPS51-217ENST00000639871 EIF4A2Q14240 407 aaKnown RBP24.2■■□□□ 1.46
VPS51-217ENST00000639871 MAP2P11137 1827 aaKnown RBP24.19■■□□□ 1.46
VPS51-217ENST00000639871 YY1P25490 414 aa24.19■■□□□ 1.46
VPS51-217ENST00000639871 SPG7Q9UQ90 795 aa24.19■■□□□ 1.46
VPS51-217ENST00000639871 TOGARAM1Q9Y4F4 1720 aa24.18■■□□□ 1.46
VPS51-217ENST00000639871 PALLDQ8WX93 1383 aa24.18■■□□□ 1.46
VPS51-217ENST00000639871 MPRIPQ6WCQ1 1025 aa24.18■■□□□ 1.46
VPS51-217ENST00000639871 HMGB2P26583 209 aaKnown RBP24.16■■□□□ 1.46
VPS51-217ENST00000639871 TNNT2P45379 298 aaPredicted RBP24.16■■□□□ 1.46
VPS51-217ENST00000639871 PIGBQ92521 554 aa24.16■■□□□ 1.46
VPS51-217ENST00000639871 TUBGCP6Q96RT7 1819 aa24.16■■□□□ 1.46
VPS51-217ENST00000639871 IGSF1Q8N6C5 1336 aa24.15■■□□□ 1.46
VPS51-217ENST00000639871 COL23A1Q86Y22 540 aaPredicted RBP24.15■■□□□ 1.46
VPS51-217ENST00000639871 SMARCC1Q92922 1105 aaPredicted RBP24.15■■□□□ 1.46
VPS51-217ENST00000639871 PHKG2P15735 406 aa24.13■■□□□ 1.45
VPS51-217ENST00000639871 POLD1P28340 1107 aa24.13■■□□□ 1.45
VPS51-217ENST00000639871 IFNL2Q8IZJ0 200 aa24.12■■□□□ 1.45
VPS51-217ENST00000639871 C5P01031 1676 aa24.1■■□□□ 1.45
VPS51-217ENST00000639871 ITGB4P16144 1822 aa24.1■■□□□ 1.45
VPS51-217ENST00000639871 AMER1Q5JTC6 1135 aaPredicted RBP24.08■■□□□ 1.45
VPS51-217ENST00000639871 MORC1Q86VD1 984 aa24.08■■□□□ 1.45
VPS51-217ENST00000639871 FLAD1Q8NFF5 587 aa24.08■■□□□ 1.45
VPS51-217ENST00000639871 KNSTRNQ9Y448 316 aa24.07■■□□□ 1.44
VPS51-217ENST00000639871 KIF7Q2M1P5 1343 aa24.07■■□□□ 1.44
VPS51-217ENST00000639871 TAF1LQ8IZX4 1826 aa24.06■■□□□ 1.44
VPS51-217ENST00000639871 LOC102724428A0A0B4J2F2 783 aa24.06■■□□□ 1.44
VPS51-217ENST00000639871 SIK1P57059 783 aa24.06■■□□□ 1.44
VPS51-217ENST00000639871 AMIGO3Q86WK7 504 aa24.06■■□□□ 1.44
VPS51-217ENST00000639871 TMOD3Q9NYL9 352 aa24.06■■□□□ 1.44
VPS51-217ENST00000639871 GOLGB1Q14789 3259 aaKnown RBP24.06■■□□□ 1.44
VPS51-217ENST00000639871 ASAP1Q9ULH1 1129 aa24.05■■□□□ 1.44
VPS51-217ENST00000639871 C4BP0C0L5 1744 aa24.04■■□□□ 1.44
VPS51-217ENST00000639871 ATG3Q9NT62 314 aa24.04■■□□□ 1.44
VPS51-217ENST00000639871 KDRP35968 1356 aa24.03■■□□□ 1.44
VPS51-217ENST00000639871 ERVV-2B6SEH9 535 aa24.02■■□□□ 1.44
VPS51-217ENST00000639871 PER1O15534 1290 aaPredicted RBP24.02■■□□□ 1.44
VPS51-217ENST00000639871 MSH5O43196 834 aa24.02■■□□□ 1.44
VPS51-217ENST00000639871 AMOTQ4VCS5 1084 aa24.02■■□□□ 1.44
VPS51-217ENST00000639871 PLEKHO1Q53GL0 409 aaPredicted RBP24.02■■□□□ 1.44
VPS51-217ENST00000639871 LINC00116Q8NCU8 138 aa24.02■■□□□ 1.44
VPS51-217ENST00000639871 DCAF5Q96JK2 942 aa24.02■■□□□ 1.44
VPS51-217ENST00000639871 IL13P35225 146 aa24.01■■□□□ 1.43
VPS51-217ENST00000639871 ITPK1Q13572 414 aa24.01■■□□□ 1.43
VPS51-217ENST00000639871 AEBP1Q8IUX7 1158 aa24.01■■□□□ 1.43
VPS51-217ENST00000639871 NLGN2Q8NFZ4 835 aa24.01■■□□□ 1.43
VPS51-217ENST00000639871 AK7Q96M32 723 aa24.01■■□□□ 1.43
VPS51-217ENST00000639871 HSP90AB1P08238 724 aaKnown RBP24■■□□□ 1.43
VPS51-217ENST00000639871 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.99■■□□□ 1.43
VPS51-217ENST00000639871 SSFA2P28290 1259 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms