RNA–Protein interactions for RNA: ENST00000639811.1

NECAP1-219, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-219ENST00000639811 KIAA0232Q92628 1395 aa12.5□□□□□ -0.41
NECAP1-219ENST00000639811 C1orf167Q5SNV9 1468 aa12.5□□□□□ -0.41
NECAP1-219ENST00000639811 ABCC4O15439 1325 aa12.49□□□□□ -0.41
NECAP1-219ENST00000639811 STRCP1A6NGW2 1772 aa12.49□□□□□ -0.41
NECAP1-219ENST00000639811 HDAC1Q13547 482 aaPredicted RBP12.49□□□□□ -0.41
NECAP1-219ENST00000639811 USHBP1Q8N6Y0 703 aa12.49□□□□□ -0.41
NECAP1-219ENST00000639811 TRPM3Q9HCF6 1732 aaPredicted RBP12.49□□□□□ -0.41
NECAP1-219ENST00000639811 RTF1Q92541 710 aaKnown RBP12.49□□□□□ -0.41
NECAP1-219ENST00000639811 C19orf44Q9H6X5 657 aa12.49□□□□□ -0.41
NECAP1-219ENST00000639811 ZBTB7BO15156 539 aaPredicted RBP12.48□□□□□ -0.41
NECAP1-219ENST00000639811 KCNH5Q8NCM2 988 aa12.48□□□□□ -0.41
NECAP1-219ENST00000639811 LRRC37A3O60309 1634 aa12.48□□□□□ -0.41
NECAP1-219ENST00000639811 PHRF1Q9P1Y6 1649 aaKnown RBP12.48□□□□□ -0.41
NECAP1-219ENST00000639811 SLIT3O75094 1523 aa12.48□□□□□ -0.41
NECAP1-219ENST00000639811 MSH6P52701 1360 aa12.48□□□□□ -0.41
NECAP1-219ENST00000639811 NOP58Q9Y2X3 529 aaKnown RBP12.47□□□□□ -0.41
NECAP1-219ENST00000639811 HTATSF1O43719 755 aaKnown RBP12.47□□□□□ -0.41
NECAP1-219ENST00000639811 NBPF6Q5VWK0 638 aa12.47□□□□□ -0.41
NECAP1-219ENST00000639811 NBPF4Q96M43 638 aa12.47□□□□□ -0.41
NECAP1-219ENST00000639811 KIF1AQ12756 1690 aa12.47□□□□□ -0.41
NECAP1-219ENST00000639811 TMEM94Q12767 1356 aa12.46□□□□□ -0.41
NECAP1-219ENST00000639811 ZBTB7CA1YPR0 619 aa12.46□□□□□ -0.41
NECAP1-219ENST00000639811 GNAT3A8MTJ3 354 aa12.46□□□□□ -0.41
NECAP1-219ENST00000639811 GCP02774 474 aa12.46□□□□□ -0.41
NECAP1-219ENST00000639811 KRT28Q7Z3Y7 464 aa12.46□□□□□ -0.41
NECAP1-219ENST00000639811 API5Q9BZZ5 524 aaKnown RBP12.46□□□□□ -0.41
NECAP1-219ENST00000639811 TSPYL4Q9UJ04 414 aa12.46□□□□□ -0.41
NECAP1-219ENST00000639811 RGS12O14924 1447 aa12.46□□□□□ -0.42
NECAP1-219ENST00000639811 PLEKHG5O94827 1062 aa12.46□□□□□ -0.42
NECAP1-219ENST00000639811 HSPA2P54652 639 aa12.46□□□□□ -0.42
NECAP1-219ENST00000639811 USP19O94966 1318 aa12.46□□□□□ -0.42
NECAP1-219ENST00000639811 MAP3K5Q99683 1374 aa12.45□□□□□ -0.42
NECAP1-219ENST00000639811 MST1RQ04912 1400 aa12.45□□□□□ -0.42
NECAP1-219ENST00000639811 RGPD2P0DJD1 1756 aa12.45□□□□□ -0.42
NECAP1-219ENST00000639811 ARHGEF25Q86VW2 580 aa12.45□□□□□ -0.42
NECAP1-219ENST00000639811 SMC5Q8IY18 1101 aa12.45□□□□□ -0.42
NECAP1-219ENST00000639811 IL17REQ8NFR9 667 aa12.45□□□□□ -0.42
NECAP1-219ENST00000639811 VIRMAQ69YN4 1812 aaKnown RBP12.45□□□□□ -0.42
NECAP1-219ENST00000639811 LMOD2Q6P5Q4 547 aa12.45□□□□□ -0.42
NECAP1-219ENST00000639811 ERICH6Q7L0X2 663 aa12.45□□□□□ -0.42
NECAP1-219ENST00000639811 HAP1P54257 671 aaPredicted RBP12.44□□□□□ -0.42
NECAP1-219ENST00000639811 LRRC59Q96AG4 307 aaKnown RBP12.44□□□□□ -0.42
NECAP1-219ENST00000639811 C1orf115Q9H7X2 142 aa12.44□□□□□ -0.42
NECAP1-219ENST00000639811 ATF3P18847 181 aa12.43□□□□□ -0.42
NECAP1-219ENST00000639811 ZBTB47Q9UFB7 747 aaPredicted RBP12.43□□□□□ -0.42
NECAP1-219ENST00000639811 ALS2Q96Q42 1657 aa12.43□□□□□ -0.42
NECAP1-219ENST00000639811 DDX17Q92841 729 aaKnown RBP12.42□□□□□ -0.42
NECAP1-219ENST00000639811 DCCP43146 1447 aa12.42□□□□□ -0.42
NECAP1-219ENST00000639811 INTS3Q68E01 1043 aaKnown RBP12.42□□□□□ -0.42
NECAP1-219ENST00000639811 CHMP4BQ9H444 224 aaKnown RBP12.42□□□□□ -0.42
NECAP1-219ENST00000639811 NCOA3Q9Y6Q9 1424 aa12.41□□□□□ -0.42
NECAP1-219ENST00000639811 MED1Q15648 1581 aaPredicted RBP12.41□□□□□ -0.42
NECAP1-219ENST00000639811 SEC24BO95487 1268 aa12.41□□□□□ -0.42
NECAP1-219ENST00000639811 SLC4A2P04920 1241 aa12.41□□□□□ -0.42
NECAP1-219ENST00000639811 SIRT2Q8IXJ6 389 aa12.41□□□□□ -0.42
NECAP1-219ENST00000639811 AXIN2Q9Y2T1 843 aa12.41□□□□□ -0.42
NECAP1-219ENST00000639811 NCAPD2Q15021 1401 aa12.41□□□□□ -0.42
NECAP1-219ENST00000639811 PTPRCP08575 1304 aa12.4□□□□□ -0.42
NECAP1-219ENST00000639811 G2E3Q7L622 706 aa12.4□□□□□ -0.42
NECAP1-219ENST00000639811 ANKRD24Q8TF21 1146 aa12.4□□□□□ -0.42
NECAP1-219ENST00000639811 CEMIPQ8WUJ3 1361 aa12.4□□□□□ -0.42
NECAP1-219ENST00000639811 NUCB1Q02818 461 aa12.4□□□□□ -0.42
NECAP1-219ENST00000639811 TAF7Q15545 349 aaPredicted RBP12.4□□□□□ -0.42
NECAP1-219ENST00000639811 CAMTA1Q9Y6Y1 1673 aa12.39□□□□□ -0.43
NECAP1-219ENST00000639811 LGR6Q9HBX8 967 aa12.39□□□□□ -0.43
NECAP1-219ENST00000639811 BABAM1Q9NWV8 329 aa12.39□□□□□ -0.43
NECAP1-219ENST00000639811 RGPD5Q99666 1765 aa12.38□□□□□ -0.43
NECAP1-219ENST00000639811 XIRP1Q702N8 1843 aaKnown RBP12.38□□□□□ -0.43
NECAP1-219ENST00000639811 LMO7Q8WWI1 1683 aa12.38□□□□□ -0.43
NECAP1-219ENST00000639811 FAM208AQ9UK61 1670 aaKnown RBP12.38□□□□□ -0.43
NECAP1-219ENST00000639811 KDM4FA0A1W2PPD8 638 aa12.37□□□□□ -0.43
NECAP1-219ENST00000639811 ZC3H6P61129 1189 aaKnown RBP12.37□□□□□ -0.43
NECAP1-219ENST00000639811 CADPS2Q86UW7 1296 aa12.37□□□□□ -0.43
NECAP1-219ENST00000639811 PXDNQ92626 1479 aa12.37□□□□□ -0.43
NECAP1-219ENST00000639811 LMTK3Q96Q04 1460 aa12.37□□□□□ -0.43
NECAP1-219ENST00000639811 CHD1LQ86WJ1 897 aa12.37□□□□□ -0.43
NECAP1-219ENST00000639811 LNPKQ9C0E8 428 aa12.37□□□□□ -0.43
NECAP1-219ENST00000639811 PLEKHO1Q53GL0 409 aaPredicted RBP12.36□□□□□ -0.43
NECAP1-219ENST00000639811 ZNF530Q6P9A1 599 aaPredicted RBP12.36□□□□□ -0.43
NECAP1-219ENST00000639811 GCC1Q96CN9 775 aa12.36□□□□□ -0.43
NECAP1-219ENST00000639811 DDRGK1Q96HY6 314 aa12.36□□□□□ -0.43
NECAP1-219ENST00000639811 STRCQ7RTU9 1775 aa12.36□□□□□ -0.43
NECAP1-219ENST00000639811 F6X3S4 739 aa12.36□□□□□ -0.43
NECAP1-219ENST00000639811 AKAP4Q5JQC9 854 aa12.36□□□□□ -0.43
NECAP1-219ENST00000639811 NECTIN2Q92692 538 aa12.36□□□□□ -0.43
NECAP1-219ENST00000639811 ATP10DQ9P241 1426 aa12.36□□□□□ -0.43
NECAP1-219ENST00000639811 ERBB3P21860 1342 aa12.35□□□□□ -0.43
NECAP1-219ENST00000639811 CCDC30Q5VVM6 783 aa12.35□□□□□ -0.43
NECAP1-219ENST00000639811 MEIS3Q99687 375 aa12.35□□□□□ -0.43
NECAP1-219ENST00000639811 STK31Q9BXU1 1019 aa12.35□□□□□ -0.43
NECAP1-219ENST00000639811 SOS1Q07889 1333 aaPredicted RBP12.35□□□□□ -0.43
NECAP1-219ENST00000639811 NPHP3Q7Z494 1330 aa12.35□□□□□ -0.43
NECAP1-219ENST00000639811 KDM3BQ7LBC6 1761 aa12.35□□□□□ -0.43
NECAP1-219ENST00000639811 AMOTQ4VCS5 1084 aa12.35□□□□□ -0.43
NECAP1-219ENST00000639811 ANKRD45Q5TZF3 282 aa12.35□□□□□ -0.43
NECAP1-219ENST00000639811 MPRIPQ6WCQ1 1025 aa12.35□□□□□ -0.43
NECAP1-219ENST00000639811 TNS3Q68CZ2 1445 aa12.34□□□□□ -0.43
NECAP1-219ENST00000639811 KCNQ3O43525 872 aa12.34□□□□□ -0.43
NECAP1-219ENST00000639811 FLIIQ13045 1269 aa12.34□□□□□ -0.43
NECAP1-219ENST00000639811 CABLES1Q8TDN4 633 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms