RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 RIPK4P57078 832 aa27.42■■□□□ 1.98
SCARB2-219ENST00000639738 NEUROD2Q15784 382 aa27.42■■□□□ 1.98
SCARB2-219ENST00000639738 PKD1L3Q7Z443 1732 aa27.42■■□□□ 1.98
SCARB2-219ENST00000639738 NEFMP07197 916 aa27.41■■□□□ 1.98
SCARB2-219ENST00000639738 PARP4Q9UKK3 1724 aaKnown RBP27.4■■□□□ 1.98
SCARB2-219ENST00000639738 RXRBP28702 533 aa27.4■■□□□ 1.98
SCARB2-219ENST00000639738 WNK3Q9BYP7 1800 aa27.39■■□□□ 1.98
SCARB2-219ENST00000639738 NGLY1Q96IV0 654 aa27.39■■□□□ 1.98
SCARB2-219ENST00000639738 UNC5CLQ8IV45 518 aa27.38■■□□□ 1.97
SCARB2-219ENST00000639738 OVOS2A0A0G2JMS6 1433 aa27.38■■□□□ 1.97
SCARB2-219ENST00000639738 DISP2A7MBM2 1401 aa27.38■■□□□ 1.97
SCARB2-219ENST00000639738 GAS2L2Q8NHY3 880 aa27.36■■□□□ 1.97
SCARB2-219ENST00000639738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.36■■□□□ 1.97
SCARB2-219ENST00000639738 SPATA31A1Q5TZJ5 1347 aa27.36■■□□□ 1.97
SCARB2-219ENST00000639738 SHANK3Q9BYB0 1731 aa27.36■■□□□ 1.97
SCARB2-219ENST00000639738 PDE3BQ13370 1112 aa27.36■■□□□ 1.97
SCARB2-219ENST00000639738 AMOTQ4VCS5 1084 aa27.36■■□□□ 1.97
SCARB2-219ENST00000639738 RAPGEF4Q8WZA2 1011 aa27.36■■□□□ 1.97
SCARB2-219ENST00000639738 CDCA7LQ96GN5 454 aa27.36■■□□□ 1.97
SCARB2-219ENST00000639738 SPATA31A5Q5VU36 1347 aa27.35■■□□□ 1.97
SCARB2-219ENST00000639738 SPATA31A7Q8IWB4 1347 aa27.35■■□□□ 1.97
SCARB2-219ENST00000639738 TATP17735 454 aaPredicted RBP27.35■■□□□ 1.97
SCARB2-219ENST00000639738 PLEKHO1Q53GL0 409 aaPredicted RBP27.35■■□□□ 1.97
SCARB2-219ENST00000639738 WDR63Q8IWG1 891 aa27.35■■□□□ 1.97
SCARB2-219ENST00000639738 SPINK5Q9NQ38 1064 aaPredicted RBP27.35■■□□□ 1.97
SCARB2-219ENST00000639738 TRMT2AQ8IZ69 625 aaKnown RBP27.34■■□□□ 1.97
SCARB2-219ENST00000639738 VPS72Q15906 364 aa27.32■■□□□ 1.96
SCARB2-219ENST00000639738 ADAMTS7Q9UKP4 1686 aa27.32■■□□□ 1.96
SCARB2-219ENST00000639738 IL2RBP14784 551 aa27.31■■□□□ 1.96
SCARB2-219ENST00000639738 QTRT2Q9H974 415 aaKnown RBP27.31■■□□□ 1.96
SCARB2-219ENST00000639738 VIRMAQ69YN4 1812 aaKnown RBP27.31■■□□□ 1.96
SCARB2-219ENST00000639738 LRRC37A3O60309 1634 aa27.31■■□□□ 1.96
SCARB2-219ENST00000639738 HTATSF1O43719 755 aaKnown RBP27.31■■□□□ 1.96
SCARB2-219ENST00000639738 GOLGA2Q08379 1002 aa27.31■■□□□ 1.96
SCARB2-219ENST00000639738 SLFN5Q08AF3 891 aa27.31■■□□□ 1.96
SCARB2-219ENST00000639738 USP35Q9P2H5 1018 aa27.3■■□□□ 1.96
SCARB2-219ENST00000639738 USP21Q9UK80 565 aa27.3■■□□□ 1.96
SCARB2-219ENST00000639738 MAP3K5Q99683 1374 aa27.3■■□□□ 1.96
SCARB2-219ENST00000639738 RGS12O14924 1447 aa27.3■■□□□ 1.96
SCARB2-219ENST00000639738 RBM6P78332 1123 aaKnown RBP27.29■■□□□ 1.96
SCARB2-219ENST00000639738 LMOD3Q0VAK6 560 aa27.29■■□□□ 1.96
SCARB2-219ENST00000639738 THUMPD2Q9BTF0 503 aaKnown RBP27.29■■□□□ 1.96
SCARB2-219ENST00000639738 THRAP3Q9Y2W1 955 aaKnown RBP27.29■■□□□ 1.96
SCARB2-219ENST00000639738 IL16Q14005 1332 aa27.28■■□□□ 1.96
SCARB2-219ENST00000639738 GNAT3A8MTJ3 354 aa27.28■■□□□ 1.96
SCARB2-219ENST00000639738 DCTN1Q14203 1278 aa27.28■■□□□ 1.96
SCARB2-219ENST00000639738 AKAP4Q5JQC9 854 aa27.28■■□□□ 1.96
SCARB2-219ENST00000639738 ZNF530Q6P9A1 599 aaPredicted RBP27.28■■□□□ 1.96
SCARB2-219ENST00000639738 IL17REQ8NFR9 667 aa27.27■■□□□ 1.96
SCARB2-219ENST00000639738 SPG7Q9UQ90 795 aa27.27■■□□□ 1.96
SCARB2-219ENST00000639738 CYP27B1O15528 508 aa27.26■■□□□ 1.96
SCARB2-219ENST00000639738 ATRNO75882 1429 aa27.26■■□□□ 1.95
SCARB2-219ENST00000639738 CENPBP07199 599 aaPredicted RBP27.26■■□□□ 1.95
SCARB2-219ENST00000639738 DUSP27Q5VZP5 1158 aa27.26■■□□□ 1.95
SCARB2-219ENST00000639738 BARGINQ6ZT62 677 aa27.26■■□□□ 1.95
SCARB2-219ENST00000639738 MCM10Q7L590 875 aa27.26■■□□□ 1.95
SCARB2-219ENST00000639738 CEMIPQ8WUJ3 1361 aa27.25■■□□□ 1.95
SCARB2-219ENST00000639738 ZCRB1Q8TBF4 217 aaKnown RBP27.25■■□□□ 1.95
SCARB2-219ENST00000639738 GLI3P10071 1580 aa27.24■■□□□ 1.95
SCARB2-219ENST00000639738 SCN11AQ9UI33 1791 aa27.24■■□□□ 1.95
SCARB2-219ENST00000639738 ZNF853P0CG23 659 aa27.24■■□□□ 1.95
SCARB2-219ENST00000639738 PHKG2P15735 406 aa27.24■■□□□ 1.95
SCARB2-219ENST00000639738 E9PSI1 815 aa27.23■■□□□ 1.95
SCARB2-219ENST00000639738 UPF1Q92900 1129 aaKnown RBP eCLIP27.23■■□□□ 1.958e-6■■□□□ 12.8
SCARB2-219ENST00000639738 LGR6Q9HBX8 967 aa27.22■■□□□ 1.95
SCARB2-219ENST00000639738 KDM6AO15550 1401 aaPredicted RBP27.21■■□□□ 1.95
SCARB2-219ENST00000639738 IFNL2Q8IZJ0 200 aa27.21■■□□□ 1.95
SCARB2-219ENST00000639738 CDCA7Q9BWT1 371 aaPredicted RBP27.21■■□□□ 1.95
SCARB2-219ENST00000639738 TRPC5Q9UL62 973 aaPredicted RBP27.21■■□□□ 1.95
SCARB2-219ENST00000639738 SIPA1L3O60292 1781 aaPredicted RBP27.21■■□□□ 1.95
SCARB2-219ENST00000639738 THSD7AQ9UPZ6 1657 aa27.19■■□□□ 1.94
SCARB2-219ENST00000639738 NKX1-1Q15270 411 aaPredicted RBP27.19■■□□□ 1.94
SCARB2-219ENST00000639738 C1orf141Q5JVX7 400 aa27.19■■□□□ 1.94
SCARB2-219ENST00000639738 RTF1Q92541 710 aaKnown RBP27.19■■□□□ 1.94
SCARB2-219ENST00000639738 PCDH11XQ9BZA7 1347 aa27.18■■□□□ 1.94
SCARB2-219ENST00000639738 PCDH11YQ9BZA8 1340 aa27.18■■□□□ 1.94
SCARB2-219ENST00000639738 RNMTO43148 476 aaKnown RBP27.18■■□□□ 1.94
SCARB2-219ENST00000639738 CALD1Q05682 793 aaKnown RBP27.18■■□□□ 1.94
SCARB2-219ENST00000639738 MPRIPQ6WCQ1 1025 aa27.18■■□□□ 1.94
SCARB2-219ENST00000639738 TNS2Q63HR2 1409 aa27.18■■□□□ 1.94
SCARB2-219ENST00000639738 IFT57Q9NWB7 429 aa27.17■■□□□ 1.94
SCARB2-219ENST00000639738 CCDC9Q9Y3X0 531 aaKnown RBP27.17■■□□□ 1.94
SCARB2-219ENST00000639738 GJD4Q96KN9 370 aaPredicted RBP27.16■■□□□ 1.94
SCARB2-219ENST00000639738 CFAP44Q96MT7 982 aa27.16■■□□□ 1.94
SCARB2-219ENST00000639738 CHL1O00533 1208 aa27.16■■□□□ 1.94
SCARB2-219ENST00000639738 ONECUT3O60422 494 aaPredicted RBP27.15■■□□□ 1.94
SCARB2-219ENST00000639738 FANCIQ9NVI1 1328 aa27.14■■□□□ 1.94
SCARB2-219ENST00000639738 GNAI1P63096 354 aa27.14■■□□□ 1.94
SCARB2-219ENST00000639738 MRC1P22897 1456 aa27.14■■□□□ 1.93
SCARB2-219ENST00000639738 EXOC5O00471 708 aa27.13■■□□□ 1.93
SCARB2-219ENST00000639738 FAM98CQ17RN3 349 aaKnown RBP27.13■■□□□ 1.93
SCARB2-219ENST00000639738 TSR2Q969E8 191 aaKnown RBP27.13■■□□□ 1.93
SCARB2-219ENST00000639738 TOGARAM1Q9Y4F4 1720 aa27.13■■□□□ 1.93
SCARB2-219ENST00000639738 DCAF5Q96JK2 942 aa27.12■■□□□ 1.93
SCARB2-219ENST00000639738 MYH16Q9H6N6 1097 aa27.12■■□□□ 1.93
SCARB2-219ENST00000639738 EP400Q96L91 3159 aa27.11■■□□□ 1.93
SCARB2-219ENST00000639738 MBIPQ9NS73 344 aa27.11■■□□□ 1.93
SCARB2-219ENST00000639738 KDM3BQ7LBC6 1761 aa27.11■■□□□ 1.93
SCARB2-219ENST00000639738 HSP90AB1P08238 724 aaKnown RBP27.11■■□□□ 1.93
SCARB2-219ENST00000639738 DDX54Q8TDD1 881 aaKnown RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms