RNA–Protein interactions for RNA: ENST00000639603.1

STRADA-238, Transcript of STE20-related kinase adaptor alpha, human

TSL 5

Gene STRADA, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-238	ENST00000639603	SPDYE2	Q495Y8	402 aa		10.88	□□□□□ -0.67
STRADA-238	ENST00000639603	TTC21B	Q7Z4L5	1316 aa		10.87	□□□□□ -0.67
STRADA-238	ENST00000639603	NBPF1	Q3BBV0	1214 aa		10.87	□□□□□ -0.67
STRADA-238	ENST00000639603	ERBB3	P21860	1342 aa		10.86	□□□□□ -0.67
STRADA-238	ENST00000639603	CEP350	Q5VT06	3117 aa		10.86	□□□□□ -0.67
STRADA-238	ENST00000639603	RGPD2	P0DJD1	1756 aa		10.86	□□□□□ -0.67
STRADA-238	ENST00000639603	SPDYE4	A6NLX3	237 aa		10.86	□□□□□ -0.67
STRADA-238	ENST00000639603	IL2RB	P14784	551 aa		10.86	□□□□□ -0.67
STRADA-238	ENST00000639603	ZNF827	Q17R98	1081 aa		10.86	□□□□□ -0.67
STRADA-238	ENST00000639603	SLC27A3	Q5K4L6	730 aa		10.86	□□□□□ -0.67
STRADA-238	ENST00000639603	ACSBG1	Q96GR2	724 aa		10.86	□□□□□ -0.67
STRADA-238	ENST00000639603	SOX12	O15370	315 aa		10.85	□□□□□ -0.67
STRADA-238	ENST00000639603	GRIN3B	O60391	1043 aa		10.85	□□□□□ -0.67
STRADA-238	ENST00000639603	PELP1	Q8IZL8	1130 aa	Known RBP	10.85	□□□□□ -0.67
STRADA-238	ENST00000639603	KLHL34	Q8N239	644 aa		10.85	□□□□□ -0.67
STRADA-238	ENST00000639603	KTN1	Q86UP2	1357 aa	Known RBP	10.85	□□□□□ -0.67
STRADA-238	ENST00000639603	AKT1S1	Q96B36	256 aa		10.84	□□□□□ -0.67
STRADA-238	ENST00000639603	USP31	Q70CQ4	1352 aa		10.84	□□□□□ -0.67
STRADA-238	ENST00000639603	PNPLA7	Q6ZV29	1317 aa		10.84	□□□□□ -0.67
STRADA-238	ENST00000639603	LRRC4B	Q9NT99	713 aa		10.83	□□□□□ -0.68
STRADA-238	ENST00000639603	NLRP2	Q9NX02	1062 aa		10.83	□□□□□ -0.68
STRADA-238	ENST00000639603	TFCP2L1	Q9NZI6	479 aa		10.82	□□□□□ -0.68
STRADA-238	ENST00000639603	ATP10D	Q9P241	1426 aa		10.82	□□□□□ -0.68
STRADA-238	ENST00000639603	ANKRD36B	Q8N2N9	1353 aa		10.81	□□□□□ -0.68
STRADA-238	ENST00000639603	RBM42	Q9BTD8	480 aa	Known RBP	10.81	□□□□□ -0.68
STRADA-238	ENST00000639603	ITGB4	P16144	1822 aa		10.81	□□□□□ -0.68
STRADA-238	ENST00000639603	UBR3	Q6ZT12	1888 aa		10.81	□□□□□ -0.68
STRADA-238	ENST00000639603	HMGB2	P26583	209 aa	Known RBP	10.8	□□□□□ -0.68
STRADA-238	ENST00000639603	NLGN2	Q8NFZ4	835 aa		10.8	□□□□□ -0.68
STRADA-238	ENST00000639603	ANKRD24	Q8TF21	1146 aa		10.8	□□□□□ -0.68
STRADA-238	ENST00000639603	SSUH2	Q9Y2M2	353 aa		10.8	□□□□□ -0.68
STRADA-238	ENST00000639603	ADCY9	O60503	1353 aa		10.79	□□□□□ -0.68
STRADA-238	ENST00000639603	SBNO2	Q9Y2G9	1366 aa		10.79	□□□□□ -0.68
STRADA-238	ENST00000639603	EDC4	Q6P2E9	1401 aa	Known RBP	10.79	□□□□□ -0.68
STRADA-238	ENST00000639603	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.79	□□□□□ -0.68
STRADA-238	ENST00000639603	ROCK2	O75116	1388 aa	Known RBP	10.78	□□□□□ -0.68
STRADA-238	ENST00000639603	YBX3	P16989	372 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
STRADA-238	ENST00000639603	HSPA6	P17066	643 aa		10.78	□□□□□ -0.68
STRADA-238	ENST00000639603	CD163L1	Q9NR16	1453 aa		10.78	□□□□□ -0.68
STRADA-238	ENST00000639603	C4B	P0C0L5	1744 aa		10.78	□□□□□ -0.68
STRADA-238	ENST00000639603	NSD2	O96028	1365 aa		10.77	□□□□□ -0.68
STRADA-238	ENST00000639603	KIF13B	Q9NQT8	1826 aa		10.77	□□□□□ -0.68
STRADA-238	ENST00000639603	CIC	Q96RK0	1608 aa	Predicted RBP	10.77	□□□□□ -0.68
STRADA-238	ENST00000639603	TOGARAM1	Q9Y4F4	1720 aa		10.77	□□□□□ -0.69
STRADA-238	ENST00000639603	WDR90	Q96KV7	1748 aa		10.76	□□□□□ -0.69
STRADA-238	ENST00000639603	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
STRADA-238	ENST00000639603	SYTL4	Q96C24	671 aa	Predicted RBP	10.76	□□□□□ -0.69
STRADA-238	ENST00000639603	CD2AP	Q9Y5K6	639 aa		10.76	□□□□□ -0.69
STRADA-238	ENST00000639603	USP47	Q96K76	1375 aa		10.76	□□□□□ -0.69
STRADA-238	ENST00000639603	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.75	□□□□□ -0.69
STRADA-238	ENST00000639603	DDX54	Q8TDD1	881 aa	Known RBP	10.75	□□□□□ -0.69
STRADA-238	ENST00000639603	CCNL1	Q9UK58	526 aa	Predicted RBP	10.75	□□□□□ -0.69
STRADA-238	ENST00000639603	NSD3	Q9BZ95	1437 aa		10.75	□□□□□ -0.69
STRADA-238	ENST00000639603	KIF20B	Q96Q89	1820 aa		10.74	□□□□□ -0.69
STRADA-238	ENST00000639603	NME9	Q86XW9	330 aa		10.74	□□□□□ -0.69
STRADA-238	ENST00000639603	FLAD1	Q8NFF5	587 aa		10.74	□□□□□ -0.69
STRADA-238	ENST00000639603	IP6K1	Q92551	441 aa		10.74	□□□□□ -0.69
STRADA-238	ENST00000639603	PKD1L3	Q7Z443	1732 aa		10.74	□□□□□ -0.69
STRADA-238	ENST00000639603	BRCA1	P38398	1863 aa	Known RBP	10.74	□□□□□ -0.69
STRADA-238	ENST00000639603	MEGF6	O75095	1541 aa		10.74	□□□□□ -0.69
STRADA-238	ENST00000639603	PRIM1	P49642	420 aa	Known RBP	10.73	□□□□□ -0.69
STRADA-238	ENST00000639603	CGNL1	Q0VF96	1302 aa		10.73	□□□□□ -0.69
STRADA-238	ENST00000639603	KIAA1551	Q9HCM1	1747 aa		10.72	□□□□□ -0.69
STRADA-238	ENST00000639603	MAP2	P11137	1827 aa	Known RBP	10.72	□□□□□ -0.69
STRADA-238	ENST00000639603	ARFGEF1	Q9Y6D6	1849 aa		10.72	□□□□□ -0.69
STRADA-238	ENST00000639603	KCNQ4	P56696	695 aa		10.72	□□□□□ -0.69
STRADA-238	ENST00000639603	COL23A1	Q86Y22	540 aa	Predicted RBP	10.72	□□□□□ -0.69
STRADA-238	ENST00000639603	TERF2IP	Q9NYB0	399 aa		10.72	□□□□□ -0.69
STRADA-238	ENST00000639603		A0A1W2PP64	1363 aa		10.72	□□□□□ -0.69
STRADA-238	ENST00000639603	RTL1	A6NKG5	1358 aa		10.72	□□□□□ -0.69
STRADA-238	ENST00000639603	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.72	□□□□□ -0.69
STRADA-238	ENST00000639603	SMG6	Q86US8	1419 aa	Known RBP	10.71	□□□□□ -0.69
STRADA-238	ENST00000639603	ZCRB1	Q8TBF4	217 aa	Known RBP	10.71	□□□□□ -0.69
STRADA-238	ENST00000639603	L3MBTL2	Q969R5	705 aa		10.71	□□□□□ -0.69
STRADA-238	ENST00000639603	MSL1	Q68DK7	614 aa		10.7	□□□□□ -0.7
STRADA-238	ENST00000639603	APLP1	P51693	650 aa		10.69	□□□□□ -0.7
STRADA-238	ENST00000639603	TMC1	Q8TDI8	760 aa		10.69	□□□□□ -0.7
STRADA-238	ENST00000639603	ZNF526	Q8TF50	670 aa	Predicted RBP	10.69	□□□□□ -0.7
STRADA-238	ENST00000639603	LTV1	Q96GA3	475 aa	Predicted RBP	10.69	□□□□□ -0.7
STRADA-238	ENST00000639603	ZNF831	Q5JPB2	1677 aa		10.69	□□□□□ -0.7
STRADA-238	ENST00000639603	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.69	□□□□□ -0.7
STRADA-238	ENST00000639603	PALLD	Q8WX93	1383 aa		10.68	□□□□□ -0.7
STRADA-238	ENST00000639603	IGSF1	Q8N6C5	1336 aa		10.68	□□□□□ -0.7
STRADA-238	ENST00000639603	PCDH11X	Q9BZA7	1347 aa		10.68	□□□□□ -0.7
STRADA-238	ENST00000639603	PCDH11Y	Q9BZA8	1340 aa		10.68	□□□□□ -0.7
STRADA-238	ENST00000639603	HOXC9	P31274	260 aa		10.68	□□□□□ -0.7
STRADA-238	ENST00000639603	PUS7	Q96PZ0	661 aa	Known RBP	10.68	□□□□□ -0.7
STRADA-238	ENST00000639603	ANKRD26	Q9UPS8	1709 aa		10.67	□□□□□ -0.7
STRADA-238	ENST00000639603	MAP3K19	Q56UN5	1328 aa		10.67	□□□□□ -0.7
STRADA-238	ENST00000639603	AMPH	P49418	695 aa		10.67	□□□□□ -0.7
STRADA-238	ENST00000639603	COG3	Q96JB2	828 aa		10.67	□□□□□ -0.7
STRADA-238	ENST00000639603	AK7	Q96M32	723 aa		10.67	□□□□□ -0.7
STRADA-238	ENST00000639603	COL5A3	P25940	1745 aa	Predicted RBP	10.67	□□□□□ -0.7
STRADA-238	ENST00000639603	KIF3C	O14782	793 aa		10.66	□□□□□ -0.7
STRADA-238	ENST00000639603	RAPGEF4	Q8WZA2	1011 aa		10.66	□□□□□ -0.7
STRADA-238	ENST00000639603	SMARCC1	Q92922	1105 aa	Predicted RBP	10.66	□□□□□ -0.7
STRADA-238	ENST00000639603	C4A	P0C0L4	1744 aa		10.65	□□□□□ -0.7
STRADA-238	ENST00000639603	SLC12A5	Q9H2X9	1139 aa		10.65	□□□□□ -0.7
STRADA-238	ENST00000639603	SBF1	O95248	1867 aa		10.65	□□□□□ -0.7
STRADA-238	ENST00000639603	TOMM70	O94826	608 aa		10.64	□□□□□ -0.71

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