RNA–Protein interactions for RNA: ENST00000639596.1

MED17-220, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 2,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-220ENST00000639596 CCDC27Q2M243 656 aa25.66■■□□□ 1.7
MED17-220ENST00000639596 NCBP3Q53F19 620 aaKnown RBP25.66■■□□□ 1.7
MED17-220ENST00000639596 NGEFQ8N5V2 710 aa25.66■■□□□ 1.7
MED17-220ENST00000639596 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.66■■□□□ 1.7
MED17-220ENST00000639596 PARP4Q9UKK3 1724 aaKnown RBP25.65■■□□□ 1.7
MED17-220ENST00000639596 OVOS2A0A0G2JMS6 1433 aa25.64■■□□□ 1.7
MED17-220ENST00000639596 PKD1L3Q7Z443 1732 aa25.64■■□□□ 1.7
MED17-220ENST00000639596 SPATA31A1Q5TZJ5 1347 aa25.64■■□□□ 1.7
MED17-220ENST00000639596 CDCA7LQ96GN5 454 aa25.64■■□□□ 1.69
MED17-220ENST00000639596 TATP17735 454 aaPredicted RBP25.63■■□□□ 1.69
MED17-220ENST00000639596 GAS2L2Q8NHY3 880 aa25.63■■□□□ 1.69
MED17-220ENST00000639596 USP21Q9UK80 565 aa25.63■■□□□ 1.69
MED17-220ENST00000639596 AFF2P51816 1311 aa25.63■■□□□ 1.69
MED17-220ENST00000639596 SPATA31A5Q5VU36 1347 aa25.63■■□□□ 1.69
MED17-220ENST00000639596 SPATA31A7Q8IWB4 1347 aa25.63■■□□□ 1.69
MED17-220ENST00000639596 DISP2A7MBM2 1401 aa25.63■■□□□ 1.69
MED17-220ENST00000639596 WNK3Q9BYP7 1800 aa25.63■■□□□ 1.69
MED17-220ENST00000639596 THUMPD2Q9BTF0 503 aaKnown RBP25.62■■□□□ 1.69
MED17-220ENST00000639596 SPINK5Q9NQ38 1064 aaPredicted RBP25.62■■□□□ 1.69
MED17-220ENST00000639596 IL2RBP14784 551 aa25.61■■□□□ 1.69
MED17-220ENST00000639596 DCTN1Q14203 1278 aa25.61■■□□□ 1.69
MED17-220ENST00000639596 PLEKHO1Q53GL0 409 aaPredicted RBP25.61■■□□□ 1.69
MED17-220ENST00000639596 AMOTQ4VCS5 1084 aa25.61■■□□□ 1.69
MED17-220ENST00000639596 SHANK3Q9BYB0 1731 aa25.6■■□□□ 1.69
MED17-220ENST00000639596 PLEKHG2Q9H7P9 1386 aa25.6■■□□□ 1.69
MED17-220ENST00000639596 VPS72Q15906 364 aa25.6■■□□□ 1.69
MED17-220ENST00000639596 ZNF530Q6P9A1 599 aaPredicted RBP25.59■■□□□ 1.69
MED17-220ENST00000639596 MCM10Q7L590 875 aa25.58■■□□□ 1.69
MED17-220ENST00000639596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.58■■□□□ 1.692e-6■■■■□ 20.3
MED17-220ENST00000639596 CCDC9Q9Y3X0 531 aaKnown RBP25.58■■□□□ 1.69
MED17-220ENST00000639596 MAP3K5Q99683 1374 aa25.58■■□□□ 1.68
MED17-220ENST00000639596 GOLGA2Q08379 1002 aa25.57■■□□□ 1.68
MED17-220ENST00000639596 GNAT3A8MTJ3 354 aa25.56■■□□□ 1.68
MED17-220ENST00000639596 CYP27B1O15528 508 aa25.55■■□□□ 1.68
MED17-220ENST00000639596 WDR63Q8IWG1 891 aa25.55■■□□□ 1.68
MED17-220ENST00000639596 PDE3BQ13370 1112 aa25.55■■□□□ 1.68
MED17-220ENST00000639596 SPG7Q9UQ90 795 aa25.55■■□□□ 1.68
MED17-220ENST00000639596 THRAP3Q9Y2W1 955 aaKnown RBP25.55■■□□□ 1.68
MED17-220ENST00000639596 LMOD3Q0VAK6 560 aa25.54■■□□□ 1.68
MED17-220ENST00000639596 AKAP4Q5JQC9 854 aa25.54■■□□□ 1.68
MED17-220ENST00000639596 VIRMAQ69YN4 1812 aaKnown RBP25.54■■□□□ 1.68
MED17-220ENST00000639596 IL17REQ8NFR9 667 aa25.54■■□□□ 1.68
MED17-220ENST00000639596 ZCRB1Q8TBF4 217 aaKnown RBP25.54■■□□□ 1.68
MED17-220ENST00000639596 LRRC37A3O60309 1634 aa25.53■■□□□ 1.68
MED17-220ENST00000639596 GLI3P10071 1580 aa25.53■■□□□ 1.68
MED17-220ENST00000639596 ATRNO75882 1429 aa25.53■■□□□ 1.68
MED17-220ENST00000639596 SLFN5Q08AF3 891 aa25.53■■□□□ 1.68
MED17-220ENST00000639596 PHKG2P15735 406 aa25.52■■□□□ 1.68
MED17-220ENST00000639596 BARGINQ6ZT62 677 aa25.52■■□□□ 1.68
MED17-220ENST00000639596 HTATSF1O43719 755 aaKnown RBP25.51■■□□□ 1.67
MED17-220ENST00000639596 LGR6Q9HBX8 967 aa25.51■■□□□ 1.67
MED17-220ENST00000639596 ADAMTS7Q9UKP4 1686 aa25.51■■□□□ 1.67
MED17-220ENST00000639596 C1orf141Q5JVX7 400 aa25.51■■□□□ 1.67
MED17-220ENST00000639596 MPRIPQ6WCQ1 1025 aa25.51■■□□□ 1.67
MED17-220ENST00000639596 TRMT2AQ8IZ69 625 aaKnown RBP25.51■■□□□ 1.67
MED17-220ENST00000639596 RTF1Q92541 710 aaKnown RBP25.51■■□□□ 1.67
MED17-220ENST00000639596 FAM98CQ17RN3 349 aaKnown RBP25.5■■□□□ 1.67
MED17-220ENST00000639596 DUSP27Q5VZP5 1158 aa25.5■■□□□ 1.67
MED17-220ENST00000639596 CEMIPQ8WUJ3 1361 aa25.5■■□□□ 1.67
MED17-220ENST00000639596 KDM6AO15550 1401 aaPredicted RBP25.49■■□□□ 1.67
MED17-220ENST00000639596 PCDH11XQ9BZA7 1347 aa25.49■■□□□ 1.67
MED17-220ENST00000639596 PCDH11YQ9BZA8 1340 aa25.49■■□□□ 1.67
MED17-220ENST00000639596 IFNL2Q8IZJ0 200 aa25.49■■□□□ 1.67
MED17-220ENST00000639596 E9PSI1 815 aa25.48■■□□□ 1.67
MED17-220ENST00000639596 GJD4Q96KN9 370 aaPredicted RBP25.48■■□□□ 1.67
MED17-220ENST00000639596 TRPC5Q9UL62 973 aaPredicted RBP25.48■■□□□ 1.67
MED17-220ENST00000639596 IL16Q14005 1332 aa25.48■■□□□ 1.67
MED17-220ENST00000639596 TNS2Q63HR2 1409 aa25.48■■□□□ 1.67
MED17-220ENST00000639596 SCN11AQ9UI33 1791 aa25.47■■□□□ 1.67
MED17-220ENST00000639596 DDX54Q8TDD1 881 aaKnown RBP25.46■■□□□ 1.67
MED17-220ENST00000639596 CDCA7Q9BWT1 371 aaPredicted RBP25.46■■□□□ 1.67
MED17-220ENST00000639596 ZNF853P0CG23 659 aa25.46■■□□□ 1.67
MED17-220ENST00000639596 TSR2Q969E8 191 aaKnown RBP25.46■■□□□ 1.67
MED17-220ENST00000639596 QTRT2Q9H974 415 aaKnown RBP25.46■■□□□ 1.67
MED17-220ENST00000639596 THSD7AQ9UPZ6 1657 aa25.46■■□□□ 1.67
MED17-220ENST00000639596 RNMTO43148 476 aaKnown RBP25.45■■□□□ 1.66
MED17-220ENST00000639596 FANCIQ9NVI1 1328 aa25.44■■□□□ 1.66
MED17-220ENST00000639596 EXOC5O00471 708 aa25.43■■□□□ 1.66
MED17-220ENST00000639596 IFT57Q9NWB7 429 aa25.43■■□□□ 1.66
MED17-220ENST00000639596 LAS1LQ9Y4W2 734 aaKnown RBP25.43■■□□□ 1.66
MED17-220ENST00000639596 CFAP44Q96MT7 982 aa25.43■■□□□ 1.66
MED17-220ENST00000639596 CALD1Q05682 793 aaKnown RBP25.42■■□□□ 1.66
MED17-220ENST00000639596 DDB1Q16531 1140 aa25.42■■□□□ 1.66
MED17-220ENST00000639596 NKX1-1Q15270 411 aaPredicted RBP25.42■■□□□ 1.66
MED17-220ENST00000639596 TOGARAM1Q9Y4F4 1720 aa25.42■■□□□ 1.66
MED17-220ENST00000639596 SIPA1L3O60292 1781 aaPredicted RBP25.42■■□□□ 1.66
MED17-220ENST00000639596 DCAF5Q96JK2 942 aa25.41■■□□□ 1.66
MED17-220ENST00000639596 MBIPQ9NS73 344 aa25.41■■□□□ 1.66
MED17-220ENST00000639596 MIS18AQ9NYP9 233 aa25.41■■□□□ 1.66
MED17-220ENST00000639596 GNAI1P63096 354 aa25.4■■□□□ 1.66
MED17-220ENST00000639596 MYH16Q9H6N6 1097 aa25.4■■□□□ 1.66
MED17-220ENST00000639596 RGS17Q9UGC6 210 aaPredicted RBP25.4■■□□□ 1.66
MED17-220ENST00000639596 CHL1O00533 1208 aa25.39■■□□□ 1.66
MED17-220ENST00000639596 MRC1P22897 1456 aa25.39■■□□□ 1.65
MED17-220ENST00000639596 ZNF772Q68DY9 489 aaPredicted RBP25.39■■□□□ 1.65
MED17-220ENST00000639596 ONECUT3O60422 494 aaPredicted RBP25.38■■□□□ 1.65
MED17-220ENST00000639596 HSP90AB1P08238 724 aaKnown RBP25.38■■□□□ 1.65
MED17-220ENST00000639596 MARCH10Q8NA82 808 aaPredicted RBP25.37■■□□□ 1.65
MED17-220ENST00000639596 TEFQ10587 303 aa25.36■■□□□ 1.65
MED17-220ENST00000639596 TAF7Q15545 349 aaPredicted RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms