RNA–Protein interactions for RNA: ENST00000639555.1

NPAS4-204, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 5 BASIC

Gene NPAS4, Length 878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-204ENST00000639555 ANP32CO43423 234 aa23.36■■□□□ 1.33
NPAS4-204ENST00000639555 AMOTQ4VCS5 1084 aa23.36■■□□□ 1.33
NPAS4-204ENST00000639555 PLEKHO1Q53GL0 409 aaPredicted RBP23.36■■□□□ 1.33
NPAS4-204ENST00000639555 PLEKHG2Q9H7P9 1386 aa23.35■■□□□ 1.33
NPAS4-204ENST00000639555 PCDH11XQ9BZA7 1347 aa23.33■■□□□ 1.33
NPAS4-204ENST00000639555 PCDH11YQ9BZA8 1340 aa23.33■■□□□ 1.33
NPAS4-204ENST00000639555 NCAPD2Q15021 1401 aa23.33■■□□□ 1.33
NPAS4-204ENST00000639555 BRWD3Q6RI45 1802 aa23.33■■□□□ 1.33
NPAS4-204ENST00000639555 TRIM37O94972 964 aa23.31■■□□□ 1.32
NPAS4-204ENST00000639555 U2AF1L5P0DN76 240 aaPredicted RBP23.31■■□□□ 1.32
NPAS4-204ENST00000639555 U2AF1Q01081 240 aaKnown RBP eCLIP23.31■■□□□ 1.32
NPAS4-204ENST00000639555 MEGF6O75095 1541 aa23.31■■□□□ 1.32
NPAS4-204ENST00000639555 EP400Q96L91 3159 aa23.3■■□□□ 1.32
NPAS4-204ENST00000639555 HMOX1P09601 288 aa23.3■■□□□ 1.32
NPAS4-204ENST00000639555 AEBP1Q8IUX7 1158 aa23.3■■□□□ 1.32
NPAS4-204ENST00000639555 IFNL2Q8IZJ0 200 aa23.3■■□□□ 1.32
NPAS4-204ENST00000639555 PNNQ9H307 717 aaKnown RBP23.3■■□□□ 1.32
NPAS4-204ENST00000639555 BCL9O00512 1426 aa23.3■■□□□ 1.32
NPAS4-204ENST00000639555 RGPD2P0DJD1 1756 aa23.29■■□□□ 1.32
NPAS4-204ENST00000639555 KDRP35968 1356 aa23.29■■□□□ 1.32
NPAS4-204ENST00000639555 NEFMP07197 916 aa23.29■■□□□ 1.32
NPAS4-204ENST00000639555 BAG6P46379 1132 aa23.29■■□□□ 1.32
NPAS4-204ENST00000639555 BCL11BQ9C0K0 894 aaPredicted RBP23.29■■□□□ 1.32
NPAS4-204ENST00000639555 HSP90AB1P08238 724 aaKnown RBP23.28■■□□□ 1.32
NPAS4-204ENST00000639555 LRRC37A3O60309 1634 aa23.28■■□□□ 1.32
NPAS4-204ENST00000639555 FCHSD2O94868 740 aa23.27■■□□□ 1.32
NPAS4-204ENST00000639555 WNK3Q9BYP7 1800 aa23.26■■□□□ 1.31
NPAS4-204ENST00000639555 APBA3O96018 575 aa23.26■■□□□ 1.31
NPAS4-204ENST00000639555 C1orf141Q5JVX7 400 aa23.26■■□□□ 1.31
NPAS4-204ENST00000639555 CYP27B1O15528 508 aa23.24■■□□□ 1.31
NPAS4-204ENST00000639555 ZNF530Q6P9A1 599 aaPredicted RBP23.24■■□□□ 1.31
NPAS4-204ENST00000639555 COL3A1P02461 1466 aaPredicted RBP23.24■■□□□ 1.31
NPAS4-204ENST00000639555 PHKG2P15735 406 aa23.23■■□□□ 1.31
NPAS4-204ENST00000639555 NKX1-1Q15270 411 aaPredicted RBP23.23■■□□□ 1.31
NPAS4-204ENST00000639555 SYTL4Q96C24 671 aaPredicted RBP23.23■■□□□ 1.31
NPAS4-204ENST00000639555 ACSBG1Q96GR2 724 aa23.23■■□□□ 1.31
NPAS4-204ENST00000639555 WDR43Q15061 677 aaKnown RBP eCLIP23.21■■□□□ 1.31
NPAS4-204ENST00000639555 GAS2L2Q8NHY3 880 aa23.21■■□□□ 1.31
NPAS4-204ENST00000639555 PRIM1P49642 420 aaKnown RBP23.2■■□□□ 1.3
NPAS4-204ENST00000639555 DCAF5Q96JK2 942 aa23.2■■□□□ 1.3
NPAS4-204ENST00000639555 PRKAR2BP31323 418 aa23.19■■□□□ 1.3
NPAS4-204ENST00000639555 AKAP4Q5JQC9 854 aa23.19■■□□□ 1.3
NPAS4-204ENST00000639555 PLSCR1O15162 318 aa23.18■■□□□ 1.3
NPAS4-204ENST00000639555 KCNQ2O43526 872 aa23.18■■□□□ 1.3
NPAS4-204ENST00000639555 RSPH6AQ9H0K4 717 aa23.18■■□□□ 1.3
NPAS4-204ENST00000639555 RGPD1P0DJD0 1748 aa23.17■■□□□ 1.3
NPAS4-204ENST00000639555 EN1Q05925 392 aaPredicted RBP23.17■■□□□ 1.3
NPAS4-204ENST00000639555 DEFB132Q7Z7B7 95 aa23.17■■□□□ 1.3
NPAS4-204ENST00000639555 ERVV-2B6SEH9 535 aa23.16■■□□□ 1.3
NPAS4-204ENST00000639555 HMGB2P26583 209 aaKnown RBP23.16■■□□□ 1.3
NPAS4-204ENST00000639555 MTHFSDQ2M296 383 aaKnown RBP23.16■■□□□ 1.3
NPAS4-204ENST00000639555 MPRIPQ6WCQ1 1025 aa23.15■■□□□ 1.3
NPAS4-204ENST00000639555 MAPK8IP3Q9UPT6 1336 aa23.14■■□□□ 1.3
NPAS4-204ENST00000639555 KAT6BQ8WYB5 2073 aa23.14■■□□□ 1.29
NPAS4-204ENST00000639555 TMOD3Q9NYL9 352 aa23.13■■□□□ 1.29
NPAS4-204ENST00000639555 GNAT3A8MTJ3 354 aa23.12■■□□□ 1.29
NPAS4-204ENST00000639555 CABP4P57796 275 aa23.12■■□□□ 1.29
NPAS4-204ENST00000639555 PKD1L3Q7Z443 1732 aa23.12■■□□□ 1.29
NPAS4-204ENST00000639555 CAMKK2Q96RR4 588 aa23.12■■□□□ 1.29
NPAS4-204ENST00000639555 RTF1Q92541 710 aaKnown RBP23.11■■□□□ 1.29
NPAS4-204ENST00000639555 SMARCC1Q92922 1105 aaPredicted RBP23.11■■□□□ 1.29
NPAS4-204ENST00000639555 PHACTR3Q96KR7 559 aa23.11■■□□□ 1.29
NPAS4-204ENST00000639555 EZH2Q15910 746 aaKnown RBP23.1■■□□□ 1.29
NPAS4-204ENST00000639555 PTF1AQ7RTS3 328 aa23.1■■□□□ 1.29
NPAS4-204ENST00000639555 NBPF14Q5TI25 921 aa23.09■■□□□ 1.29
NPAS4-204ENST00000639555 MRS2Q9HD23 443 aa23.09■■□□□ 1.29
NPAS4-204ENST00000639555 HTATSF1O43719 755 aaKnown RBP23.07■■□□□ 1.28
NPAS4-204ENST00000639555 PIGBQ92521 554 aa23.07■■□□□ 1.28
NPAS4-204ENST00000639555 ADAMTS8Q9UP79 889 aa23.07■■□□□ 1.28
NPAS4-204ENST00000639555 RNMTO43148 476 aaKnown RBP23.06■■□□□ 1.28
NPAS4-204ENST00000639555 PLEKHF1Q96S99 279 aa23.06■■□□□ 1.28
NPAS4-204ENST00000639555 SBF2Q86WG5 1849 aa23.05■■□□□ 1.28
NPAS4-204ENST00000639555 SHANK3Q9BYB0 1731 aa23.05■■□□□ 1.28
NPAS4-204ENST00000639555 TXNRD1Q16881 649 aa23.05■■□□□ 1.28
NPAS4-204ENST00000639555 SLC27A3Q5K4L6 730 aa23.05■■□□□ 1.28
NPAS4-204ENST00000639555 DIEXFQ68CQ4 756 aaKnown RBP23.05■■□□□ 1.28
NPAS4-204ENST00000639555 NFATC2IPQ8NCF5 419 aa23.05■■□□□ 1.28
NPAS4-204ENST00000639555 RUNDC1Q96C34 613 aa23.05■■□□□ 1.28
NPAS4-204ENST00000639555 MAP3K5Q99683 1374 aa23.04■■□□□ 1.28
NPAS4-204ENST00000639555 TEFQ10587 303 aa23.04■■□□□ 1.28
NPAS4-204ENST00000639555 NHSQ6T4R5 1651 aa23.03■■□□□ 1.28
NPAS4-204ENST00000639555 NFE2L2Q16236 605 aa23.03■■□□□ 1.28
NPAS4-204ENST00000639555 LGR6Q9HBX8 967 aa23.03■■□□□ 1.28
NPAS4-204ENST00000639555 SLC52A2Q9HAB3 445 aa23.02■■□□□ 1.28
NPAS4-204ENST00000639555 TNS1Q9HBL0 1735 aaKnown RBP23■■□□□ 1.27
NPAS4-204ENST00000639555 LMOD3Q0VAK6 560 aa23■■□□□ 1.27
NPAS4-204ENST00000639555 PNISRQ8TF01 805 aaKnown RBP23■■□□□ 1.27
NPAS4-204ENST00000639555 RIPK4P57078 832 aa22.99■■□□□ 1.27
NPAS4-204ENST00000639555 PROM2Q8N271 834 aa22.99■■□□□ 1.27
NPAS4-204ENST00000639555 IL17REQ8NFR9 667 aa22.99■■□□□ 1.27
NPAS4-204ENST00000639555 CCNL1Q9UK58 526 aaPredicted RBP22.99■■□□□ 1.27
NPAS4-204ENST00000639555 KDM6AO15550 1401 aaPredicted RBP22.99■■□□□ 1.27
NPAS4-204ENST00000639555 CCDC146Q8IYE0 955 aa22.98■■□□□ 1.27
NPAS4-204ENST00000639555 ASAP1Q9ULH1 1129 aa22.98■■□□□ 1.27
NPAS4-204ENST00000639555 DOT1LQ8TEK3 1739 aa22.98■■□□□ 1.27
NPAS4-204ENST00000639555 PALLDQ8WX93 1383 aa22.98■■□□□ 1.27
NPAS4-204ENST00000639555 CCDC184Q52MB2 194 aa22.97■■□□□ 1.27
NPAS4-204ENST00000639555 ATG3Q9NT62 314 aa22.97■■□□□ 1.27
NPAS4-204ENST00000639555 TMPOP42166 694 aaKnown RBP22.96■■□□□ 1.27
NPAS4-204ENST00000639555 TTC5Q8N0Z6 440 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms