RNA–Protein interactions for RNA: ENST00000639548.1

PAX6-258, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-258ENST00000639548 ARHGAP45Q92619 1136 aa15.59■□□□□ 0.09
PAX6-258ENST00000639548 SMC4Q9NTJ3 1288 aa15.59■□□□□ 0.09
PAX6-258ENST00000639548 AFF2P51816 1311 aa15.58■□□□□ 0.09
PAX6-258ENST00000639548 KIAA0232Q92628 1395 aa15.58■□□□□ 0.08
PAX6-258ENST00000639548 MVPQ14764 893 aaKnown RBP15.58■□□□□ 0.08
PAX6-258ENST00000639548 DZIP1LQ8IYY4 767 aaKnown RBP15.58■□□□□ 0.08
PAX6-258ENST00000639548 GAS2L2Q8NHY3 880 aa15.58■□□□□ 0.08
PAX6-258ENST00000639548 FRAT1Q92837 279 aaPredicted RBP15.58■□□□□ 0.08
PAX6-258ENST00000639548 EYA1Q99502 592 aa15.58■□□□□ 0.08
PAX6-258ENST00000639548 MBIPQ9NS73 344 aa15.58■□□□□ 0.08
PAX6-258ENST00000639548 ABCC6O95255 1503 aa15.57■□□□□ 0.08
PAX6-258ENST00000639548 VAMP4O75379 141 aa15.57■□□□□ 0.08
PAX6-258ENST00000639548 PAK3O75914 559 aaPredicted RBP15.57■□□□□ 0.08
PAX6-258ENST00000639548 RXRBP28702 533 aa15.57■□□□□ 0.08
PAX6-258ENST00000639548 ATF7IPQ6VMQ6 1270 aa15.57■□□□□ 0.08
PAX6-258ENST00000639548 PANK1Q8TE04 598 aa15.57■□□□□ 0.08
PAX6-258ENST00000639548 CRB1P82279 1406 aa15.56■□□□□ 0.08
PAX6-258ENST00000639548 CHL1O00533 1208 aa15.56■□□□□ 0.08
PAX6-258ENST00000639548 COG6Q9Y2V7 657 aa15.56■□□□□ 0.08
PAX6-258ENST00000639548 RLBP1P12271 317 aa15.55■□□□□ 0.08
PAX6-258ENST00000639548 C8orf37Q96NL8 207 aa15.55■□□□□ 0.08
PAX6-258ENST00000639548 NPHP3Q7Z494 1330 aa15.55■□□□□ 0.08
PAX6-258ENST00000639548 TRIM27P14373 513 aa15.54■□□□□ 0.08
PAX6-258ENST00000639548 DDX19BQ9UMR2 479 aa15.54■□□□□ 0.08
PAX6-258ENST00000639548 PXDNQ92626 1479 aa15.54■□□□□ 0.08
PAX6-258ENST00000639548 SOX12O15370 315 aa15.53■□□□□ 0.08
PAX6-258ENST00000639548 FTSJ3Q8IY81 847 aaKnown RBP15.53■□□□□ 0.08
PAX6-258ENST00000639548 THUMPD2Q9BTF0 503 aaKnown RBP15.53■□□□□ 0.08
PAX6-258ENST00000639548 BCL2L13Q9BXK5 485 aa15.53■□□□□ 0.08
PAX6-258ENST00000639548 BABAM1Q9NWV8 329 aa15.53■□□□□ 0.08
PAX6-258ENST00000639548 PLEKHG2Q9H7P9 1386 aa15.53■□□□□ 0.08
PAX6-258ENST00000639548 COL22A1Q8NFW1 1626 aaPredicted RBP15.53■□□□□ 0.08
PAX6-258ENST00000639548 CACNA1FO60840 1977 aa15.53■□□□□ 0.08
PAX6-258ENST00000639548 MTHFSDQ2M296 383 aaKnown RBP15.52■□□□□ 0.08
PAX6-258ENST00000639548 TWISTNBQ3B726 338 aaPredicted RBP15.52■□□□□ 0.08
PAX6-258ENST00000639548 ARHGEF25Q86VW2 580 aa15.52■□□□□ 0.08
PAX6-258ENST00000639548 CHMP4BQ9H444 224 aaKnown RBP15.52■□□□□ 0.08
PAX6-258ENST00000639548 SOS1Q07889 1333 aaPredicted RBP15.52■□□□□ 0.08
PAX6-258ENST00000639548 LMO7Q8WWI1 1683 aa15.52■□□□□ 0.08
PAX6-258ENST00000639548 CRYBG1Q9Y4K1 1723 aa15.52■□□□□ 0.08
PAX6-258ENST00000639548 FAM83GA6ND36 823 aa15.51■□□□□ 0.07
PAX6-258ENST00000639548 FOXO3O43524 673 aa15.51■□□□□ 0.07
PAX6-258ENST00000639548 ADAMTS2O95450 1211 aa15.51■□□□□ 0.07
PAX6-258ENST00000639548 NUTM2GQ5VZR2 741 aa15.51■□□□□ 0.07
PAX6-258ENST00000639548 KRT28Q7Z3Y7 464 aa15.51■□□□□ 0.07
PAX6-258ENST00000639548 MRPL50Q8N5N7 158 aaKnown RBP15.51■□□□□ 0.07
PAX6-258ENST00000639548 QTRT2Q9H974 415 aaKnown RBP15.51■□□□□ 0.07
PAX6-258ENST00000639548 FAM208AQ9UK61 1670 aaKnown RBP15.51■□□□□ 0.07
PAX6-258ENST00000639548 NOB1Q9ULX3 412 aaKnown RBP15.51■□□□□ 0.07
PAX6-258ENST00000639548 GCP02774 474 aa15.51■□□□□ 0.07
PAX6-258ENST00000639548 RTF1Q92541 710 aaKnown RBP15.51■□□□□ 0.07
PAX6-258ENST00000639548 UPF1Q92900 1129 aaKnown RBP eCLIP15.51■□□□□ 0.07
PAX6-258ENST00000639548 NGLY1Q96IV0 654 aa15.51■□□□□ 0.07
PAX6-258ENST00000639548 LAS1LQ9Y4W2 734 aaKnown RBP15.51■□□□□ 0.07
PAX6-258ENST00000639548 MAP3K5Q99683 1374 aa15.5■□□□□ 0.07
PAX6-258ENST00000639548 RBM6P78332 1123 aaKnown RBP15.5■□□□□ 0.07
PAX6-258ENST00000639548 VIRMAQ69YN4 1812 aaKnown RBP15.5■□□□□ 0.07
PAX6-258ENST00000639548 RGPD2P0DJD1 1756 aa15.5■□□□□ 0.07
PAX6-258ENST00000639548 FNBP4Q8N3X1 1017 aaPredicted RBP15.49■□□□□ 0.07
PAX6-258ENST00000639548 TSPYL6Q8N831 410 aa15.49■□□□□ 0.07
PAX6-258ENST00000639548 TNNQ9UQP3 1299 aa15.49■□□□□ 0.07
PAX6-258ENST00000639548 OVOS2A0A0G2JMS6 1433 aa15.48■□□□□ 0.07
PAX6-258ENST00000639548 ABCC4O15439 1325 aa15.48■□□□□ 0.07
PAX6-258ENST00000639548 GNAT3A8MTJ3 354 aa15.48■□□□□ 0.07
PAX6-258ENST00000639548 DCTN1Q14203 1278 aa15.48■□□□□ 0.07
PAX6-258ENST00000639548 C8orf58Q8NAV2 365 aa15.48■□□□□ 0.07
PAX6-258ENST00000639548 RWDD1Q9H446 243 aaPredicted RBP15.48■□□□□ 0.07
PAX6-258ENST00000639548 COL18A1P39060 1754 aa15.48■□□□□ 0.07
PAX6-258ENST00000639548 RGS12O14924 1447 aa15.47■□□□□ 0.07
PAX6-258ENST00000639548 TNS3Q68CZ2 1445 aa15.47■□□□□ 0.07
PAX6-258ENST00000639548 IGHDP01880 384 aa15.47■□□□□ 0.07
PAX6-258ENST00000639548 XPCQ01831 940 aaPredicted RBP15.47■□□□□ 0.07
PAX6-258ENST00000639548 API5Q9BZZ5 524 aaKnown RBP15.47■□□□□ 0.07
PAX6-258ENST00000639548 HDAC1Q13547 482 aaPredicted RBP15.46■□□□□ 0.07
PAX6-258ENST00000639548 MCM10Q7L590 875 aa15.46■□□□□ 0.07
PAX6-258ENST00000639548 BACH2Q9BYV9 841 aa15.46■□□□□ 0.07
PAX6-258ENST00000639548 USP21Q9UK80 565 aa15.46■□□□□ 0.07
PAX6-258ENST00000639548 PCDHB15Q9Y5E8 787 aa15.46■□□□□ 0.07
PAX6-258ENST00000639548 ADAMTS7Q9UKP4 1686 aa15.46■□□□□ 0.07
PAX6-258ENST00000639548 CEMIPQ8WUJ3 1361 aa15.46■□□□□ 0.06
PAX6-258ENST00000639548 ZBTB40Q9NUA8 1239 aa15.45■□□□□ 0.06
PAX6-258ENST00000639548 KDM3BQ7LBC6 1761 aa15.45■□□□□ 0.06
PAX6-258ENST00000639548 RGPD5Q99666 1765 aa15.45■□□□□ 0.06
PAX6-258ENST00000639548 PTPRCP08575 1304 aa15.45■□□□□ 0.06
PAX6-258ENST00000639548 PDE4AP27815 886 aa15.44■□□□□ 0.06
PAX6-258ENST00000639548 TMEM57Q8N5G2 664 aa15.44■□□□□ 0.06
PAX6-258ENST00000639548 TRPC5Q9UL62 973 aaPredicted RBP15.44■□□□□ 0.06
PAX6-258ENST00000639548 N4BP2Q86UW6 1770 aaPredicted RBP15.44■□□□□ 0.06
PAX6-258ENST00000639548 SPATA31A3Q5VYP0 1347 aa15.44■□□□□ 0.06
PAX6-258ENST00000639548 ATRNO75882 1429 aa15.43■□□□□ 0.06
PAX6-258ENST00000639548 AMOTQ4VCS5 1084 aa15.43■□□□□ 0.06
PAX6-258ENST00000639548 NBPF6Q5VWK0 638 aa15.43■□□□□ 0.06
PAX6-258ENST00000639548 ITPRIPQ8IWB1 547 aa15.43■□□□□ 0.06
PAX6-258ENST00000639548 NBPF4Q96M43 638 aa15.43■□□□□ 0.06
PAX6-258ENST00000639548 BCL9LQ86UU0 1499 aa15.42■□□□□ 0.06
PAX6-258ENST00000639548 TSPYL4Q9UJ04 414 aa15.42■□□□□ 0.06
PAX6-258ENST00000639548 CPDO75976 1380 aa15.42■□□□□ 0.06
PAX6-258ENST00000639548 SIPA1L3O60292 1781 aaPredicted RBP15.41■□□□□ 0.06
PAX6-258ENST00000639548 ZBTB7BO15156 539 aaPredicted RBP15.4■□□□□ 0.06
PAX6-258ENST00000639548 TAF7Q15545 349 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms