RNA–Protein interactions for RNA: ENST00000639247.1

CNTNAP2-225, Transcript of contactin associated protein like 2, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP2, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-225ENST00000639247 RIPK4P57078 832 aa19.19■□□□□ 0.66
CNTNAP2-225ENST00000639247 DCTN1Q14203 1278 aa19.19■□□□□ 0.66
CNTNAP2-225ENST00000639247 THUMPD2Q9BTF0 503 aaKnown RBP19.19■□□□□ 0.66
CNTNAP2-225ENST00000639247 DLG5Q8TDM6 1919 aa19.19■□□□□ 0.66
CNTNAP2-225ENST00000639247 GJD4Q96KN9 370 aaPredicted RBP19.18■□□□□ 0.66
CNTNAP2-225ENST00000639247 GLI3P10071 1580 aa19.18■□□□□ 0.66
CNTNAP2-225ENST00000639247 ATRNO75882 1429 aa19.18■□□□□ 0.66
CNTNAP2-225ENST00000639247 NFE2L2Q16236 605 aa19.17■□□□□ 0.66
CNTNAP2-225ENST00000639247 PNNQ9H307 717 aaKnown RBP19.17■□□□□ 0.66
CNTNAP2-225ENST00000639247 TRPC5Q9UL62 973 aaPredicted RBP19.17■□□□□ 0.66
CNTNAP2-225ENST00000639247 OVOS2A0A0G2JMS6 1433 aa19.17■□□□□ 0.66
CNTNAP2-225ENST00000639247 DISP2A7MBM2 1401 aa19.17■□□□□ 0.66
CNTNAP2-225ENST00000639247 NEFMP07197 916 aa19.16■□□□□ 0.66
CNTNAP2-225ENST00000639247 ZNF530Q6P9A1 599 aaPredicted RBP19.16■□□□□ 0.66
CNTNAP2-225ENST00000639247 DDX54Q8TDD1 881 aaKnown RBP19.16■□□□□ 0.66
CNTNAP2-225ENST00000639247 TRIM35Q9UPQ4 493 aa19.16■□□□□ 0.66
CNTNAP2-225ENST00000639247 A0A0G2JS52 829 aa19.16■□□□□ 0.66
CNTNAP2-225ENST00000639247 MYT1Q01538 1121 aa19.16■□□□□ 0.66
CNTNAP2-225ENST00000639247 EP400Q96L91 3159 aa19.15■□□□□ 0.66
CNTNAP2-225ENST00000639247 CYP27B1O15528 508 aa19.15■□□□□ 0.66
CNTNAP2-225ENST00000639247 MCM10Q7L590 875 aa19.15■□□□□ 0.66
CNTNAP2-225ENST00000639247 PLEKHO1Q53GL0 409 aaPredicted RBP19.15■□□□□ 0.66
CNTNAP2-225ENST00000639247 POTEAQ6S8J7 498 aa19.15■□□□□ 0.66
CNTNAP2-225ENST00000639247 ZCRB1Q8TBF4 217 aaKnown RBP19.15■□□□□ 0.66
CNTNAP2-225ENST00000639247 WNK3Q9BYP7 1800 aa19.15■□□□□ 0.66
CNTNAP2-225ENST00000639247 SHANK3Q9BYB0 1731 aa19.14■□□□□ 0.65
CNTNAP2-225ENST00000639247 PARP4Q9UKK3 1724 aaKnown RBP19.14■□□□□ 0.65
CNTNAP2-225ENST00000639247 MPRIPQ6WCQ1 1025 aa19.13■□□□□ 0.65
CNTNAP2-225ENST00000639247 PHF23Q9BUL5 403 aaPredicted RBP19.13■□□□□ 0.65
CNTNAP2-225ENST00000639247 FAM182BQ5T319 152 aa19.13■□□□□ 0.65
CNTNAP2-225ENST00000639247 BARGINQ6ZT62 677 aa19.13■□□□□ 0.65
CNTNAP2-225ENST00000639247 LGR6Q9HBX8 967 aa19.13■□□□□ 0.65
CNTNAP2-225ENST00000639247 THRAP3Q9Y2W1 955 aaKnown RBP19.13■□□□□ 0.65
CNTNAP2-225ENST00000639247 ZNF772Q68DY9 489 aaPredicted RBP19.12■□□□□ 0.65
CNTNAP2-225ENST00000639247 WWC1Q8IX03 1113 aa19.12■□□□□ 0.65
CNTNAP2-225ENST00000639247 PKD1L3Q7Z443 1732 aa19.12■□□□□ 0.65
CNTNAP2-225ENST00000639247 CDCA7LQ96GN5 454 aa19.12■□□□□ 0.65
CNTNAP2-225ENST00000639247 SPINK5Q9NQ38 1064 aaPredicted RBP19.12■□□□□ 0.65
CNTNAP2-225ENST00000639247 SPG7Q9UQ90 795 aa19.12■□□□□ 0.65
CNTNAP2-225ENST00000639247 AMOTQ4VCS5 1084 aa19.11■□□□□ 0.65
CNTNAP2-225ENST00000639247 GAS2L2Q8NHY3 880 aa19.11■□□□□ 0.65
CNTNAP2-225ENST00000639247 PHKG2P15735 406 aa19.1■□□□□ 0.65
CNTNAP2-225ENST00000639247 IL17REQ8NFR9 667 aa19.1■□□□□ 0.65
CNTNAP2-225ENST00000639247 LRRC37A3O60309 1634 aa19.1■□□□□ 0.65
CNTNAP2-225ENST00000639247 EXOC5O00471 708 aa19.1■□□□□ 0.65
CNTNAP2-225ENST00000639247 DDB1Q16531 1140 aa19.1■□□□□ 0.65
CNTNAP2-225ENST00000639247 GNAT3A8MTJ3 354 aa19.09■□□□□ 0.65
CNTNAP2-225ENST00000639247 C1orf141Q5JVX7 400 aa19.09■□□□□ 0.65
CNTNAP2-225ENST00000639247 KAT6BQ8WYB5 2073 aa19.09■□□□□ 0.65
CNTNAP2-225ENST00000639247 MAP3K5Q99683 1374 aa19.09■□□□□ 0.65
CNTNAP2-225ENST00000639247 ZNF521Q96K83 1311 aa19.09■□□□□ 0.65
CNTNAP2-225ENST00000639247 SEPT12Q8IYM1 358 aa19.09■□□□□ 0.65
CNTNAP2-225ENST00000639247 AKAP4Q5JQC9 854 aa19.08■□□□□ 0.64
CNTNAP2-225ENST00000639247 MARCH10Q8NA82 808 aaPredicted RBP19.08■□□□□ 0.64
CNTNAP2-225ENST00000639247 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.08■□□□□ 0.64
CNTNAP2-225ENST00000639247 ZBED9Q6R2W3 1325 aa19.07■□□□□ 0.64
CNTNAP2-225ENST00000639247 PCDH11XQ9BZA7 1347 aa19.07■□□□□ 0.64
CNTNAP2-225ENST00000639247 PCDH11YQ9BZA8 1340 aa19.07■□□□□ 0.64
CNTNAP2-225ENST00000639247 IFNL2Q8IZJ0 200 aa19.07■□□□□ 0.64
CNTNAP2-225ENST00000639247 THSD7AQ9UPZ6 1657 aa19.06■□□□□ 0.64
CNTNAP2-225ENST00000639247 VIRMAQ69YN4 1812 aaKnown RBP19.06■□□□□ 0.64
CNTNAP2-225ENST00000639247 KDM6AO15550 1401 aaPredicted RBP19.06■□□□□ 0.64
CNTNAP2-225ENST00000639247 TNS2Q63HR2 1409 aa19.06■□□□□ 0.64
CNTNAP2-225ENST00000639247 MIS18AQ9NYP9 233 aa19.06■□□□□ 0.64
CNTNAP2-225ENST00000639247 ONECUT3O60422 494 aaPredicted RBP19.05■□□□□ 0.64
CNTNAP2-225ENST00000639247 RBM6P78332 1123 aaKnown RBP19.05■□□□□ 0.64
CNTNAP2-225ENST00000639247 RTF1Q92541 710 aaKnown RBP19.05■□□□□ 0.64
CNTNAP2-225ENST00000639247 LAS1LQ9Y4W2 734 aaKnown RBP19.05■□□□□ 0.64
CNTNAP2-225ENST00000639247 RXRBP28702 533 aa19.05■□□□□ 0.64
CNTNAP2-225ENST00000639247 CDCA7Q9BWT1 371 aaPredicted RBP19.05■□□□□ 0.64
CNTNAP2-225ENST00000639247 RNMTO43148 476 aaKnown RBP19.04■□□□□ 0.64
CNTNAP2-225ENST00000639247 BRWD3Q6RI45 1802 aa19.04■□□□□ 0.64
CNTNAP2-225ENST00000639247 CCDC27Q2M243 656 aa19.04■□□□□ 0.64
CNTNAP2-225ENST00000639247 TSR2Q969E8 191 aaKnown RBP19.02■□□□□ 0.64
CNTNAP2-225ENST00000639247 ACSBG1Q96GR2 724 aa19.02■□□□□ 0.63
CNTNAP2-225ENST00000639247 PDE3BQ13370 1112 aa19.01■□□□□ 0.63
CNTNAP2-225ENST00000639247 TOGARAM1Q9Y4F4 1720 aa19.01■□□□□ 0.63
CNTNAP2-225ENST00000639247 NFATC2IPQ8NCF5 419 aa19.01■□□□□ 0.63
CNTNAP2-225ENST00000639247 CEMIPQ8WUJ3 1361 aa19■□□□□ 0.63
CNTNAP2-225ENST00000639247 SCN11AQ9UI33 1791 aa19■□□□□ 0.63
CNTNAP2-225ENST00000639247 GOLGA2Q08379 1002 aa19■□□□□ 0.63
CNTNAP2-225ENST00000639247 LMOD3Q0VAK6 560 aa19■□□□□ 0.63
CNTNAP2-225ENST00000639247 PTF1AQ7RTS3 328 aa19■□□□□ 0.63
CNTNAP2-225ENST00000639247 DCAF5Q96JK2 942 aa19■□□□□ 0.63
CNTNAP2-225ENST00000639247 NKX1-1Q15270 411 aaPredicted RBP18.99■□□□□ 0.63
CNTNAP2-225ENST00000639247 RGS12O14924 1447 aa18.99■□□□□ 0.63
CNTNAP2-225ENST00000639247 SYTL4Q96C24 671 aaPredicted RBP18.99■□□□□ 0.63
CNTNAP2-225ENST00000639247 KCNQ3O43525 872 aa18.98■□□□□ 0.63
CNTNAP2-225ENST00000639247 KCNQ2O43526 872 aa18.98■□□□□ 0.63
CNTNAP2-225ENST00000639247 HTATSF1O43719 755 aaKnown RBP18.98■□□□□ 0.63
CNTNAP2-225ENST00000639247 SLFN5Q08AF3 891 aa18.97■□□□□ 0.63
CNTNAP2-225ENST00000639247 WDR63Q8IWG1 891 aa18.97■□□□□ 0.63
CNTNAP2-225ENST00000639247 PLEKHG2Q9H7P9 1386 aa18.97■□□□□ 0.63
CNTNAP2-225ENST00000639247 ADAMTS7Q9UKP4 1686 aa18.97■□□□□ 0.63
CNTNAP2-225ENST00000639247 PRIM1P49642 420 aaKnown RBP18.97■□□□□ 0.63
CNTNAP2-225ENST00000639247 SLC39A6Q13433 755 aa18.97■□□□□ 0.63
CNTNAP2-225ENST00000639247 TEFQ10587 303 aa18.96■□□□□ 0.63
CNTNAP2-225ENST00000639247 KRT24Q2M2I5 525 aa18.96■□□□□ 0.63
CNTNAP2-225ENST00000639247 NGEFQ8N5V2 710 aa18.96■□□□□ 0.63
CNTNAP2-225ENST00000639247 SLC52A2Q9HAB3 445 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms