RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 RSRC1Q96IZ7 334 aaKnown RBP5.11□□□□□ -1.59
SCN3A-209ENST00000639244 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.11□□□□□ -1.59
SCN3A-209ENST00000639244 ZBED9Q6R2W3 1325 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 CAND2O75155 1236 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 CDKL5O76039 1030 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 MCM5P33992 734 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 IRF5Q13568 498 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 PMFBP1Q8TBY8 1022 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 DNAAF4Q8WXU2 420 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 IQSEC3Q9UPP2 1182 aaPredicted RBP5.11□□□□□ -1.59
SCN3A-209ENST00000639244 JRKLQ9Y4A0 524 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 PHLDB1Q86UU1 1377 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 BMS1Q14692 1282 aaKnown RBP5.1□□□□□ -1.59
SCN3A-209ENST00000639244 SLMAPQ14BN4 828 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 MCTP2Q6DN12 878 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 UNC45AQ9H3U1 944 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 SMARCA2P51531 1590 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 MNAT1P51948 309 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 GYS2P54840 703 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 CCDC70Q6NSX1 233 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 LMNTD2Q8IXW0 634 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 KLHL42Q9P2K6 505 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 R3HCC1Q9Y3T6 440 aaKnown RBP5.1□□□□□ -1.59
SCN3A-209ENST00000639244 AGBL1Q96MI9 1066 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 INCENPQ9NQS7 918 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 BAZ1BQ9UIG0 1483 aaKnown RBP5.1□□□□□ -1.59
SCN3A-209ENST00000639244 HOXA2O43364 376 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 XBP1P17861 261 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 AMOTQ4VCS5 1084 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 GIMAP7Q8NHV1 300 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 CLUAP1Q96AJ1 413 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 A0A1B0GUL7 405 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 PCM1Q15154 2024 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 BDNFP23560 247 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 APLP1P51693 650 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 NUCB2P80303 420 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 ZNF662Q6ZS27 426 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 ATRIPQ8WXE1 791 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 SIRT1Q96EB6 747 aa5.1□□□□□ -1.59
SCN3A-209ENST00000639244 ERLIN1O75477 346 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 RWDD2BP57060 319 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 ZNHIT6Q9NWK9 470 aaKnown RBP5.09□□□□□ -1.59
SCN3A-209ENST00000639244 THRAP3Q9Y2W1 955 aaKnown RBP5.09□□□□□ -1.59
SCN3A-209ENST00000639244 RSPH1Q8WYR4 309 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 TRAK2O60296 914 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 KINO60870 393 aaKnown RBP5.09□□□□□ -1.59
SCN3A-209ENST00000639244 MSL3P1P0C860 447 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 SAFB2Q14151 953 aaKnown RBP eCLIP5.09□□□□□ -1.59
SCN3A-209ENST00000639244 C11orf91Q3C1V1 193 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 SWT1Q5T5J6 900 aaKnown RBP5.09□□□□□ -1.59
SCN3A-209ENST00000639244 ZBTB9Q96C00 473 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 FMNL2Q96PY5 1086 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 EXOC1Q9NV70 894 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 NFXL1Q6ZNB6 911 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 C11orf96Q7Z7L8 435 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 IQCF2Q8IXL9 164 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 DRC7Q8IY82 874 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 PRIMPOLQ96LW4 560 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 GOLGA6L10A6NI86 522 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 CCDC173Q0VFZ6 552 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 PHF8Q9UPP1 1060 aa5.09□□□□□ -1.59
SCN3A-209ENST00000639244 U2SURPO15042 1029 aaKnown RBP5.09□□□□□ -1.6
SCN3A-209ENST00000639244 TRPC1P48995 793 aa5.09□□□□□ -1.6
SCN3A-209ENST00000639244 SEPT7Q16181 437 aaKnown RBP5.09□□□□□ -1.6
SCN3A-209ENST00000639244 IFNLR1Q8IU57 520 aaPredicted RBP5.09□□□□□ -1.6
SCN3A-209ENST00000639244 ZC3H15Q8WU90 426 aaKnown RBP5.09□□□□□ -1.6
SCN3A-209ENST00000639244 VTI1AQ96AJ9 217 aa5.09□□□□□ -1.6
SCN3A-209ENST00000639244 IWS1Q96ST2 819 aa5.09□□□□□ -1.6
SCN3A-209ENST00000639244 VASPP50552 380 aaPredicted RBP5.09□□□□□ -1.6
SCN3A-209ENST00000639244 CCDC174Q6PII3 467 aa5.09□□□□□ -1.6
SCN3A-209ENST00000639244 IRF2BPLQ9H1B7 796 aa5.09□□□□□ -1.6
SCN3A-209ENST00000639244 RASA3Q14644 834 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 TCEAL9Q9UHQ7 104 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 ZNF131P52739 623 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 RABEP1Q15276 862 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 PPP4R3CPQ6ZMV5 832 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 RNF168Q8IYW5 571 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-209ENST00000639244 RABL2BQ9UNT1 228 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 CCDC194A0A1B0GVG4 234 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 TCF3P15923 654 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 OTUD6AQ7L8S5 288 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 CCDC146Q8IYE0 955 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 MKL2Q9ULH7 1088 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 GIMAP6Q6P9H5 292 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 TRIML1Q8N9V2 468 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 PHC3Q8NDX5 983 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 ATP2B1P20020 1258 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 RIPK4P57078 832 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 ZRSR1Q15695 479 aaKnown RBP5.08□□□□□ -1.6
SCN3A-209ENST00000639244 MICALCLQ6ZW33 695 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 TRIM11Q96F44 468 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 OGFRQ9NZT2 677 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 ODF2LQ9ULJ1 636 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 FAN1Q9Y2M0 1017 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 PARNO95453 639 aaKnown RBP5.08□□□□□ -1.6
SCN3A-209ENST00000639244 TTC31Q49AM3 519 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-209ENST00000639244 DNAJC14Q6Y2X3 702 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-209ENST00000639244 SAMD3Q8N6K7 520 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 RNF20Q5VTR2 975 aa5.08□□□□□ -1.6
SCN3A-209ENST00000639244 EFCAB13Q8IY85 973 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms