RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 PDE4AP27815 886 aa13.76□□□□□ -0.21
TARDBP-230ENST00000639083 ARHGEF25Q86VW2 580 aa13.76□□□□□ -0.21
TARDBP-230ENST00000639083 CRB1P82279 1406 aa13.76□□□□□ -0.21
TARDBP-230ENST00000639083 CADPS2Q86UW7 1296 aa13.76□□□□□ -0.21
TARDBP-230ENST00000639083 DDX19BQ9UMR2 479 aa13.76□□□□□ -0.21
TARDBP-230ENST00000639083 NCOA3Q9Y6Q9 1424 aa13.75□□□□□ -0.21
TARDBP-230ENST00000639083 RGS3P49796 1198 aa13.75□□□□□ -0.21
TARDBP-230ENST00000639083 GNAT3A8MTJ3 354 aa13.74□□□□□ -0.21
TARDBP-230ENST00000639083 ARHGAP45Q92619 1136 aa13.74□□□□□ -0.21
TARDBP-230ENST00000639083 LRRC59Q96AG4 307 aaKnown RBP13.74□□□□□ -0.21
TARDBP-230ENST00000639083 BACH2Q9BYV9 841 aa13.74□□□□□ -0.21
TARDBP-230ENST00000639083 USP19O94966 1318 aa13.74□□□□□ -0.21
TARDBP-230ENST00000639083 LTN1O94822 1766 aa13.74□□□□□ -0.21
TARDBP-230ENST00000639083 HTATSF1O43719 755 aaKnown RBP13.74□□□□□ -0.21
TARDBP-230ENST00000639083 DCCP43146 1447 aa13.73□□□□□ -0.21
TARDBP-230ENST00000639083 LMTK3Q96Q04 1460 aa13.73□□□□□ -0.21
TARDBP-230ENST00000639083 TSPYL4Q9UJ04 414 aa13.73□□□□□ -0.21
TARDBP-230ENST00000639083 AXIN2Q9Y2T1 843 aa13.73□□□□□ -0.21
TARDBP-230ENST00000639083 IL17REQ8NFR9 667 aa13.73□□□□□ -0.21
TARDBP-230ENST00000639083 RWDD1Q9H446 243 aaPredicted RBP13.73□□□□□ -0.21
TARDBP-230ENST00000639083 ZBTB40Q9NUA8 1239 aa13.73□□□□□ -0.21
TARDBP-230ENST00000639083 MSH6P52701 1360 aa13.72□□□□□ -0.21
TARDBP-230ENST00000639083 ZC3H6P61129 1189 aaKnown RBP13.72□□□□□ -0.21
TARDBP-230ENST00000639083 TRPM3Q9HCF6 1732 aaPredicted RBP13.72□□□□□ -0.21
TARDBP-230ENST00000639083 KIF1AQ12756 1690 aa13.72□□□□□ -0.21
TARDBP-230ENST00000639083 SLIT3O75094 1523 aa13.71□□□□□ -0.21
TARDBP-230ENST00000639083 KIAA0232Q92628 1395 aa13.71□□□□□ -0.21
TARDBP-230ENST00000639083 HAP1P54257 671 aaPredicted RBP13.71□□□□□ -0.21
TARDBP-230ENST00000639083 ANKRD24Q8TF21 1146 aa13.71□□□□□ -0.21
TARDBP-230ENST00000639083 MAP3K5Q99683 1374 aa13.7□□□□□ -0.22
TARDBP-230ENST00000639083 NPHP3Q7Z494 1330 aa13.7□□□□□ -0.22
TARDBP-230ENST00000639083 ZNF335Q9H4Z2 1342 aaPredicted RBP13.69□□□□□ -0.22
TARDBP-230ENST00000639083 ZBTB7BO15156 539 aaPredicted RBP13.69□□□□□ -0.22
TARDBP-230ENST00000639083 MSH5O43196 834 aa13.69□□□□□ -0.22
TARDBP-230ENST00000639083 CABLES1Q8TDN4 633 aa13.69□□□□□ -0.22
TARDBP-230ENST00000639083 ABCC4O15439 1325 aa13.68□□□□□ -0.22
TARDBP-230ENST00000639083 API5Q9BZZ5 524 aaKnown RBP13.68□□□□□ -0.22
TARDBP-230ENST00000639083 PHRF1Q9P1Y6 1649 aaKnown RBP13.68□□□□□ -0.22
TARDBP-230ENST00000639083 STRCQ7RTU9 1775 aa13.68□□□□□ -0.22
TARDBP-230ENST00000639083 TAF7Q15545 349 aaPredicted RBP13.67□□□□□ -0.22
TARDBP-230ENST00000639083 PDZRN3Q9UPQ7 1066 aa13.67□□□□□ -0.22
TARDBP-230ENST00000639083 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
TARDBP-230ENST00000639083 HDAC1Q13547 482 aaPredicted RBP13.67□□□□□ -0.22
TARDBP-230ENST00000639083 BRINP3Q76B58 766 aa13.67□□□□□ -0.22
TARDBP-230ENST00000639083 LGR6Q9HBX8 967 aa13.66□□□□□ -0.22
TARDBP-230ENST00000639083 MED1Q15648 1581 aaPredicted RBP13.66□□□□□ -0.22
TARDBP-230ENST00000639083 FAM161AQ3B820 660 aa13.66□□□□□ -0.22
TARDBP-230ENST00000639083 PLEKHO1Q53GL0 409 aaPredicted RBP13.66□□□□□ -0.22
TARDBP-230ENST00000639083 AEBP2Q6ZN18 517 aaPredicted RBP13.66□□□□□ -0.22
TARDBP-230ENST00000639083 ALS2Q96Q42 1657 aa13.66□□□□□ -0.22
TARDBP-230ENST00000639083 ERBB3P21860 1342 aa13.65□□□□□ -0.22
TARDBP-230ENST00000639083 SPATA31A3Q5VYP0 1347 aa13.65□□□□□ -0.22
TARDBP-230ENST00000639083 RGPD2P0DJD1 1756 aa13.65□□□□□ -0.22
TARDBP-230ENST00000639083 C8orf34Q49A92 452 aa13.65□□□□□ -0.22
TARDBP-230ENST00000639083 ZNF530Q6P9A1 599 aaPredicted RBP13.65□□□□□ -0.22
TARDBP-230ENST00000639083 NPM2Q86SE8 214 aaKnown RBP13.65□□□□□ -0.22
TARDBP-230ENST00000639083 SLAIN2Q9P270 581 aa13.65□□□□□ -0.22
TARDBP-230ENST00000639083 ANP32AP39687 249 aaKnown RBP13.64□□□□□ -0.23
TARDBP-230ENST00000639083 AMOTQ4VCS5 1084 aa13.64□□□□□ -0.23
TARDBP-230ENST00000639083 AKAP4Q5JQC9 854 aa13.64□□□□□ -0.23
TARDBP-230ENST00000639083 CHMP4BQ9H444 224 aaKnown RBP13.64□□□□□ -0.23
TARDBP-230ENST00000639083 C1orf115Q9H7X2 142 aa13.64□□□□□ -0.23
TARDBP-230ENST00000639083 TNS3Q68CZ2 1445 aa13.64□□□□□ -0.23
TARDBP-230ENST00000639083 CEMIPQ8WUJ3 1361 aa13.64□□□□□ -0.23
TARDBP-230ENST00000639083 MPRIPQ6WCQ1 1025 aa13.64□□□□□ -0.23
TARDBP-230ENST00000639083 BABAM1Q9NWV8 329 aa13.64□□□□□ -0.23
TARDBP-230ENST00000639083 CHRNA2Q15822 529 aa13.63□□□□□ -0.23
TARDBP-230ENST00000639083 G2E3Q7L622 706 aa13.63□□□□□ -0.23
TARDBP-230ENST00000639083 XIRP1Q702N8 1843 aaKnown RBP13.63□□□□□ -0.23
TARDBP-230ENST00000639083 PTPRCP08575 1304 aa13.63□□□□□ -0.23
TARDBP-230ENST00000639083 PXDNQ92626 1479 aa13.63□□□□□ -0.23
TARDBP-230ENST00000639083 NCAPD2Q15021 1401 aa13.62□□□□□ -0.23
TARDBP-230ENST00000639083 INTS3Q68E01 1043 aaKnown RBP13.62□□□□□ -0.23
TARDBP-230ENST00000639083 SMC5Q8IY18 1101 aa13.62□□□□□ -0.23
TARDBP-230ENST00000639083 NECTIN2Q92692 538 aa13.62□□□□□ -0.23
TARDBP-230ENST00000639083 NLRP2Q9NX02 1062 aa13.62□□□□□ -0.23
TARDBP-230ENST00000639083 LRRC37A3O60309 1634 aa13.62□□□□□ -0.23
TARDBP-230ENST00000639083 RGS12O14924 1447 aa13.61□□□□□ -0.23
TARDBP-230ENST00000639083 C1orf141Q5JVX7 400 aa13.61□□□□□ -0.23
TARDBP-230ENST00000639083 STK31Q9BXU1 1019 aa13.61□□□□□ -0.23
TARDBP-230ENST00000639083 TEFQ10587 303 aa13.61□□□□□ -0.23
TARDBP-230ENST00000639083 CCDC30Q5VVM6 783 aa13.61□□□□□ -0.23
TARDBP-230ENST00000639083 CSB-PGBD3P0DP91 1061 aa13.6□□□□□ -0.23
TARDBP-230ENST00000639083 SIRT2Q8IXJ6 389 aa13.6□□□□□ -0.23
TARDBP-230ENST00000639083 RGPD5Q99666 1765 aa13.59□□□□□ -0.23
TARDBP-230ENST00000639083 F6X3S4 739 aa13.59□□□□□ -0.23
TARDBP-230ENST00000639083 RNMTO43148 476 aaKnown RBP13.59□□□□□ -0.23
TARDBP-230ENST00000639083 KCNQ3O43525 872 aa13.59□□□□□ -0.23
TARDBP-230ENST00000639083 RAPGEF4Q8WZA2 1011 aa13.59□□□□□ -0.23
TARDBP-230ENST00000639083 IPO9Q96P70 1041 aaKnown RBP13.59□□□□□ -0.23
TARDBP-230ENST00000639083 BTBD11A6QL63 1104 aa13.59□□□□□ -0.23
TARDBP-230ENST00000639083 EIF4A1P60842 406 aaKnown RBP13.59□□□□□ -0.23
TARDBP-230ENST00000639083 SLC4A10Q6U841 1118 aa13.59□□□□□ -0.23
TARDBP-230ENST00000639083 SOS2Q07890 1332 aaPredicted RBP13.58□□□□□ -0.24
TARDBP-230ENST00000639083 SOS1Q07889 1333 aaPredicted RBP13.57□□□□□ -0.24
TARDBP-230ENST00000639083 NUCB1Q02818 461 aa13.57□□□□□ -0.24
TARDBP-230ENST00000639083 FLIIQ13045 1269 aa13.57□□□□□ -0.24
TARDBP-230ENST00000639083 HDGFL1Q5TGJ6 251 aa13.57□□□□□ -0.24
TARDBP-230ENST00000639083 EIF2S2P20042 333 aaKnown RBP13.56□□□□□ -0.24
TARDBP-230ENST00000639083 FKBP5Q13451 457 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms