RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 ANP32BQ92688 251 aaKnown RBP11.56□□□□□ -0.56
NECAP1-215ENST00000639071 F6X3S4 739 aa11.56□□□□□ -0.56
NECAP1-215ENST00000639071 WASLO00401 505 aaPredicted RBP11.56□□□□□ -0.56
NECAP1-215ENST00000639071 PTMSP20962 102 aa11.56□□□□□ -0.56
NECAP1-215ENST00000639071 ZSCAN23Q3MJ62 389 aa11.56□□□□□ -0.56
NECAP1-215ENST00000639071 NUDT16Q96DE0 195 aaKnown RBP11.56□□□□□ -0.56
NECAP1-215ENST00000639071 CCDC173Q0VFZ6 552 aa11.55□□□□□ -0.56
NECAP1-215ENST00000639071 ATP10DQ9P241 1426 aa11.55□□□□□ -0.56
NECAP1-215ENST00000639071 FOXD4L6Q3SYB3 417 aaPredicted RBP11.55□□□□□ -0.56
NECAP1-215ENST00000639071 FOXD4L3Q6VB84 417 aaPredicted RBP11.55□□□□□ -0.56
NECAP1-215ENST00000639071 LMBRD1Q9NUN5 540 aa11.55□□□□□ -0.56
NECAP1-215ENST00000639071 CPS1P31327 1500 aa11.55□□□□□ -0.56
NECAP1-215ENST00000639071 SLC4A2P04920 1241 aa11.54□□□□□ -0.56
NECAP1-215ENST00000639071 RBSNQ9H1K0 784 aa11.54□□□□□ -0.56
NECAP1-215ENST00000639071 ATP7BP35670 1465 aa11.54□□□□□ -0.56
NECAP1-215ENST00000639071 ST18O60284 1047 aa11.54□□□□□ -0.56
NECAP1-215ENST00000639071 NUCB2P80303 420 aa11.54□□□□□ -0.56
NECAP1-215ENST00000639071 EIF4A2Q14240 407 aaKnown RBP11.54□□□□□ -0.56
NECAP1-215ENST00000639071 CASC1Q6TDU7 716 aa11.54□□□□□ -0.56
NECAP1-215ENST00000639071 RTL1A6NKG5 1358 aa11.53□□□□□ -0.56
NECAP1-215ENST00000639071 PRIM1P49642 420 aaKnown RBP11.53□□□□□ -0.56
NECAP1-215ENST00000639071 TPRNQ4KMQ1 711 aa11.53□□□□□ -0.56
NECAP1-215ENST00000639071 EDC4Q6P2E9 1401 aaKnown RBP11.53□□□□□ -0.56
NECAP1-215ENST00000639071 G2E3Q7L622 706 aa11.53□□□□□ -0.56
NECAP1-215ENST00000639071 GPT2Q8TD30 523 aa11.53□□□□□ -0.56
NECAP1-215ENST00000639071 NSFL1CQ9UNZ2 370 aaKnown RBP11.53□□□□□ -0.56
NECAP1-215ENST00000639071 EXOC6BQ9Y2D4 811 aa11.53□□□□□ -0.56
NECAP1-215ENST00000639071 ZDHHC9Q9Y397 364 aa11.53□□□□□ -0.56
NECAP1-215ENST00000639071 CDK12Q9NYV4 1490 aaPredicted RBP11.53□□□□□ -0.56
NECAP1-215ENST00000639071 RGS12O14924 1447 aa11.53□□□□□ -0.56
NECAP1-215ENST00000639071 FOXO3O43524 673 aa11.53□□□□□ -0.56
NECAP1-215ENST00000639071 KIAA1211Q6ZU35 1233 aa11.53□□□□□ -0.56
NECAP1-215ENST00000639071 NECTIN2Q92692 538 aa11.53□□□□□ -0.56
NECAP1-215ENST00000639071 MSNP26038 577 aaKnown RBP11.52□□□□□ -0.56
NECAP1-215ENST00000639071 HSP90AB2PQ58FF8 381 aa11.52□□□□□ -0.56
NECAP1-215ENST00000639071 CLEC17AQ6ZS10 378 aa11.52□□□□□ -0.56
NECAP1-215ENST00000639071 RPAP2Q8IXW5 612 aaPredicted RBP11.52□□□□□ -0.56
NECAP1-215ENST00000639071 PPP1R9BQ96SB3 815 aa11.52□□□□□ -0.56
NECAP1-215ENST00000639071 NEO1Q92859 1461 aa11.52□□□□□ -0.56
NECAP1-215ENST00000639071 METP08581 1390 aa11.52□□□□□ -0.57
NECAP1-215ENST00000639071 CYP2E1P05181 493 aaPredicted RBP11.52□□□□□ -0.57
NECAP1-215ENST00000639071 NEK4P51957 841 aa11.52□□□□□ -0.57
NECAP1-215ENST00000639071 ZSCAN30Q86W11 494 aa11.52□□□□□ -0.57
NECAP1-215ENST00000639071 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.52□□□□□ -0.57
NECAP1-215ENST00000639071 CPSF1Q10570 1443 aaKnown RBP11.51□□□□□ -0.57
NECAP1-215ENST00000639071 SYCE3A1L190 88 aa11.51□□□□□ -0.57
NECAP1-215ENST00000639071 ZBTB7CA1YPR0 619 aa11.51□□□□□ -0.57
NECAP1-215ENST00000639071 AEBP2Q6ZN18 517 aaPredicted RBP11.51□□□□□ -0.57
NECAP1-215ENST00000639071 VSIG10Q8N0Z9 540 aa11.51□□□□□ -0.57
NECAP1-215ENST00000639071 RICTORQ6R327 1708 aa11.51□□□□□ -0.57
NECAP1-215ENST00000639071 ERC2O15083 957 aa11.51□□□□□ -0.57
NECAP1-215ENST00000639071 RNF214Q8ND24 703 aa11.51□□□□□ -0.57
NECAP1-215ENST00000639071 CCDC61Q9Y6R9 512 aa11.51□□□□□ -0.57
NECAP1-215ENST00000639071 CHL1O00533 1208 aa11.5□□□□□ -0.57
NECAP1-215ENST00000639071 REC8O95072 547 aa11.5□□□□□ -0.57
NECAP1-215ENST00000639071 ZNF445P59923 1031 aa11.5□□□□□ -0.57
NECAP1-215ENST00000639071 RILPL2Q969X0 211 aa11.5□□□□□ -0.57
NECAP1-215ENST00000639071 TMEM63CQ9P1W3 806 aa11.5□□□□□ -0.57
NECAP1-215ENST00000639071 PDE1AP54750 535 aa11.49□□□□□ -0.57
NECAP1-215ENST00000639071 PALD1Q9ULE6 856 aa11.49□□□□□ -0.57
NECAP1-215ENST00000639071 PRR36Q9H6K5 1346 aa11.49□□□□□ -0.57
NECAP1-215ENST00000639071 AATKQ6ZMQ8 1374 aa11.49□□□□□ -0.57
NECAP1-215ENST00000639071 TRIM6-TRIM34B2RNG4 842 aa11.49□□□□□ -0.57
NECAP1-215ENST00000639071 RRP9O43818 475 aaKnown RBP11.49□□□□□ -0.57
NECAP1-215ENST00000639071 RBM10P98175 930 aaKnown RBP11.49□□□□□ -0.57
NECAP1-215ENST00000639071 XPCQ01831 940 aaPredicted RBP11.49□□□□□ -0.57
NECAP1-215ENST00000639071 A2ML1A8K2U0 1454 aa11.48□□□□□ -0.57
NECAP1-215ENST00000639071 TMX3Q96JJ7 454 aa11.48□□□□□ -0.57
NECAP1-215ENST00000639071 CWC22Q9HCG8 908 aaKnown RBP11.48□□□□□ -0.57
NECAP1-215ENST00000639071 TSPYL4Q9UJ04 414 aa11.48□□□□□ -0.57
NECAP1-215ENST00000639071 KIF24Q5T7B8 1368 aa11.48□□□□□ -0.57
NECAP1-215ENST00000639071 IBTKQ9P2D0 1353 aaPredicted RBP11.48□□□□□ -0.57
NECAP1-215ENST00000639071 UPF3BQ9BZI7 483 aaKnown RBP11.48□□□□□ -0.57
NECAP1-215ENST00000639071 GDPD2Q9HCC8 539 aa11.48□□□□□ -0.57
NECAP1-215ENST00000639071 ANO2Q9NQ90 1003 aa11.48□□□□□ -0.57
NECAP1-215ENST00000639071 R3HCC1Q9Y3T6 440 aaKnown RBP11.48□□□□□ -0.57
NECAP1-215ENST00000639071 RIMBP3CA6NJZ7 1639 aa11.48□□□□□ -0.57
NECAP1-215ENST00000639071 RIMBP3BA6NNM3 1639 aa11.48□□□□□ -0.57
NECAP1-215ENST00000639071 RIMBP3Q9UFD9 1639 aa11.48□□□□□ -0.57
NECAP1-215ENST00000639071 REREQ9P2R6 1566 aa11.48□□□□□ -0.57
NECAP1-215ENST00000639071 GLIPR1L2Q4G1C9 344 aa11.47□□□□□ -0.57
NECAP1-215ENST00000639071 MPNDQ8N594 471 aa11.47□□□□□ -0.57
NECAP1-215ENST00000639071 PTPRCP08575 1304 aa11.47□□□□□ -0.57
NECAP1-215ENST00000639071 HMMRO75330 724 aa11.47□□□□□ -0.57
NECAP1-215ENST00000639071 MAP4K4O95819 1239 aaPredicted RBP11.46□□□□□ -0.57
NECAP1-215ENST00000639071 PNMA6EA0A0J9YXQ4 647 aa11.46□□□□□ -0.58
NECAP1-215ENST00000639071 DTNBO60941 627 aa11.46□□□□□ -0.58
NECAP1-215ENST00000639071 MTHFSDQ2M296 383 aaKnown RBP11.46□□□□□ -0.58
NECAP1-215ENST00000639071 ARID3AQ99856 593 aa11.46□□□□□ -0.58
NECAP1-215ENST00000639071 OFD1O75665 1012 aa11.45□□□□□ -0.58
NECAP1-215ENST00000639071 UNC5CLQ8IV45 518 aa11.45□□□□□ -0.58
NECAP1-215ENST00000639071 RTF1Q92541 710 aaKnown RBP11.45□□□□□ -0.58
NECAP1-215ENST00000639071 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.45□□□□□ -0.58
NECAP1-215ENST00000639071 ACEP12821 1306 aa11.45□□□□□ -0.58
NECAP1-215ENST00000639071 MAP3K19Q56UN5 1328 aa11.45□□□□□ -0.58
NECAP1-215ENST00000639071 TTC21BQ7Z4L5 1316 aa11.45□□□□□ -0.58
NECAP1-215ENST00000639071 TPM2P07951 284 aa11.45□□□□□ -0.58
NECAP1-215ENST00000639071 FKBP5Q13451 457 aaPredicted RBP11.45□□□□□ -0.58
NECAP1-215ENST00000639071 LARP6Q9BRS8 491 aaKnown RBP11.45□□□□□ -0.58
NECAP1-215ENST00000639071 ESYT1Q9BSJ8 1104 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms