RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 CFAP53Q96M91 514 aa11.94□□□□□ -0.5
NECAP1-212ENST00000638787 PKD1L3Q7Z443 1732 aa11.93□□□□□ -0.5
NECAP1-212ENST00000638787 ZCRB1Q8TBF4 217 aaKnown RBP11.93□□□□□ -0.5
NECAP1-212ENST00000638787 SULT6B1Q6IMI4 303 aa11.92□□□□□ -0.5
NECAP1-212ENST00000638787 AEBP1Q8IUX7 1158 aa11.92□□□□□ -0.5
NECAP1-212ENST00000638787 KDRP35968 1356 aa11.92□□□□□ -0.5
NECAP1-212ENST00000638787 DDX54Q8TDD1 881 aaKnown RBP11.91□□□□□ -0.5
NECAP1-212ENST00000638787 PRKRIP1Q9H875 184 aaPredicted RBP11.91□□□□□ -0.5
NECAP1-212ENST00000638787 BCL9O00512 1426 aa11.91□□□□□ -0.5
NECAP1-212ENST00000638787 SBF2Q86WG5 1849 aa11.91□□□□□ -0.5
NECAP1-212ENST00000638787 CCDC125Q86Z20 511 aa11.91□□□□□ -0.5
NECAP1-212ENST00000638787 MYBBP1AQ9BQG0 1328 aaKnown RBP11.91□□□□□ -0.5
NECAP1-212ENST00000638787 PLEKHG2Q9H7P9 1386 aa11.91□□□□□ -0.5
NECAP1-212ENST00000638787 TNS1Q9HBL0 1735 aaKnown RBP11.9□□□□□ -0.5
NECAP1-212ENST00000638787 PCDH11XQ9BZA7 1347 aa11.9□□□□□ -0.5
NECAP1-212ENST00000638787 PCDH11YQ9BZA8 1340 aa11.9□□□□□ -0.5
NECAP1-212ENST00000638787 U2SURPO15042 1029 aaKnown RBP11.9□□□□□ -0.5
NECAP1-212ENST00000638787 TRIM37O94972 964 aa11.9□□□□□ -0.51
NECAP1-212ENST00000638787 HMOX1P09601 288 aa11.9□□□□□ -0.51
NECAP1-212ENST00000638787 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.9□□□□□ -0.51
NECAP1-212ENST00000638787 SPG7Q9UQ90 795 aa11.9□□□□□ -0.51
NECAP1-212ENST00000638787 SF3B2Q13435 895 aaKnown RBP11.89□□□□□ -0.51
NECAP1-212ENST00000638787 CYP27B1O15528 508 aa11.88□□□□□ -0.51
NECAP1-212ENST00000638787 ADRA2BP18089 450 aa11.88□□□□□ -0.51
NECAP1-212ENST00000638787 NUDCQ9Y266 331 aa11.88□□□□□ -0.51
NECAP1-212ENST00000638787 KAT6BQ8WYB5 2073 aa11.88□□□□□ -0.51
NECAP1-212ENST00000638787 NHSQ6T4R5 1651 aa11.88□□□□□ -0.51
NECAP1-212ENST00000638787 DOT1LQ8TEK3 1739 aa11.87□□□□□ -0.51
NECAP1-212ENST00000638787 PLEKHO1Q53GL0 409 aaPredicted RBP11.87□□□□□ -0.51
NECAP1-212ENST00000638787 ACSBG1Q96GR2 724 aa11.87□□□□□ -0.51
NECAP1-212ENST00000638787 AMOTQ4VCS5 1084 aa11.87□□□□□ -0.51
NECAP1-212ENST00000638787 U2AF1L5P0DN76 240 aaPredicted RBP11.86□□□□□ -0.51
NECAP1-212ENST00000638787 U2AF1Q01081 240 aaKnown RBP eCLIP11.86□□□□□ -0.51
NECAP1-212ENST00000638787 PTF1AQ7RTS3 328 aa11.86□□□□□ -0.51
NECAP1-212ENST00000638787 BCL11BQ9C0K0 894 aaPredicted RBP11.86□□□□□ -0.51
NECAP1-212ENST00000638787 KCNQ2O43526 872 aa11.85□□□□□ -0.51
NECAP1-212ENST00000638787 APBA3O96018 575 aa11.85□□□□□ -0.51
NECAP1-212ENST00000638787 ZNF530Q6P9A1 599 aaPredicted RBP11.85□□□□□ -0.51
NECAP1-212ENST00000638787 DEFB132Q7Z7B7 95 aa11.85□□□□□ -0.51
NECAP1-212ENST00000638787 IFNL2Q8IZJ0 200 aa11.85□□□□□ -0.51
NECAP1-212ENST00000638787 ANP32CO43423 234 aa11.85□□□□□ -0.51
NECAP1-212ENST00000638787 PHKG2P15735 406 aa11.85□□□□□ -0.51
NECAP1-212ENST00000638787 BAG6P46379 1132 aa11.85□□□□□ -0.51
NECAP1-212ENST00000638787 RSPH6AQ9H0K4 717 aa11.85□□□□□ -0.51
NECAP1-212ENST00000638787 TOGARAM1Q9Y4F4 1720 aa11.84□□□□□ -0.51
NECAP1-212ENST00000638787 NKX1-1Q15270 411 aaPredicted RBP11.84□□□□□ -0.51
NECAP1-212ENST00000638787 BTAF1O14981 1849 aa11.84□□□□□ -0.51
NECAP1-212ENST00000638787 PRKAR2BP31323 418 aa11.83□□□□□ -0.51
NECAP1-212ENST00000638787 PRIM1P49642 420 aaKnown RBP11.83□□□□□ -0.52
NECAP1-212ENST00000638787 EN1Q05925 392 aaPredicted RBP11.83□□□□□ -0.52
NECAP1-212ENST00000638787 C1orf141Q5JVX7 400 aa11.83□□□□□ -0.52
NECAP1-212ENST00000638787 SYTL4Q96C24 671 aaPredicted RBP11.83□□□□□ -0.52
NECAP1-212ENST00000638787 FCHSD2O94868 740 aa11.82□□□□□ -0.52
NECAP1-212ENST00000638787 RGPD3A6NKT7 1758 aaPredicted RBP11.82□□□□□ -0.52
NECAP1-212ENST00000638787 RGPD4Q7Z3J3 1758 aa11.82□□□□□ -0.52
NECAP1-212ENST00000638787 ITGB4P16144 1822 aa11.82□□□□□ -0.52
NECAP1-212ENST00000638787 HSP90AB1P08238 724 aaKnown RBP11.82□□□□□ -0.52
NECAP1-212ENST00000638787 MTHFSDQ2M296 383 aaKnown RBP11.82□□□□□ -0.52
NECAP1-212ENST00000638787 PHACTR3Q96KR7 559 aa11.81□□□□□ -0.52
NECAP1-212ENST00000638787 CAMKK2Q96RR4 588 aa11.81□□□□□ -0.52
NECAP1-212ENST00000638787 KDM6AO15550 1401 aaPredicted RBP11.81□□□□□ -0.52
NECAP1-212ENST00000638787 PLSCR1O15162 318 aa11.8□□□□□ -0.52
NECAP1-212ENST00000638787 EZH2Q15910 746 aaKnown RBP11.8□□□□□ -0.52
NECAP1-212ENST00000638787 AKAP4Q5JQC9 854 aa11.8□□□□□ -0.52
NECAP1-212ENST00000638787 DCAF5Q96JK2 942 aa11.8□□□□□ -0.52
NECAP1-212ENST00000638787 GAS2L2Q8NHY3 880 aa11.8□□□□□ -0.52
NECAP1-212ENST00000638787 RREB1Q92766 1687 aa11.8□□□□□ -0.52
NECAP1-212ENST00000638787 SCN11AQ9UI33 1791 aa11.79□□□□□ -0.52
NECAP1-212ENST00000638787 WDR43Q15061 677 aaKnown RBP eCLIP11.79□□□□□ -0.52
NECAP1-212ENST00000638787 MPRIPQ6WCQ1 1025 aa11.79□□□□□ -0.52
NECAP1-212ENST00000638787 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
NECAP1-212ENST00000638787 ERVV-2B6SEH9 535 aa11.78□□□□□ -0.52
NECAP1-212ENST00000638787 CCDC184Q52MB2 194 aa11.78□□□□□ -0.52
NECAP1-212ENST00000638787 PIGBQ92521 554 aa11.78□□□□□ -0.52
NECAP1-212ENST00000638787 PLEKHF1Q96S99 279 aa11.78□□□□□ -0.52
NECAP1-212ENST00000638787 PNNQ9H307 717 aaKnown RBP11.78□□□□□ -0.52
NECAP1-212ENST00000638787 TMOD3Q9NYL9 352 aa11.78□□□□□ -0.52
NECAP1-212ENST00000638787 ADAMTS7Q9UKP4 1686 aa11.78□□□□□ -0.52
NECAP1-212ENST00000638787 MAP3K5Q99683 1374 aa11.78□□□□□ -0.52
NECAP1-212ENST00000638787 NUP188Q5SRE5 1749 aa11.78□□□□□ -0.52
NECAP1-212ENST00000638787 NEFMP07197 916 aa11.77□□□□□ -0.52
NECAP1-212ENST00000638787 GNAT3A8MTJ3 354 aa11.76□□□□□ -0.53
NECAP1-212ENST00000638787 RNMTO43148 476 aaKnown RBP11.76□□□□□ -0.53
NECAP1-212ENST00000638787 PROM2Q8N271 834 aa11.76□□□□□ -0.53
NECAP1-212ENST00000638787 PIAS4Q8N2W9 510 aaPredicted RBP11.76□□□□□ -0.53
NECAP1-212ENST00000638787 LGR6Q9HBX8 967 aa11.76□□□□□ -0.53
NECAP1-212ENST00000638787 ADAMTS8Q9UP79 889 aa11.76□□□□□ -0.53
NECAP1-212ENST00000638787 MAPK8IP3Q9UPT6 1336 aa11.76□□□□□ -0.53
NECAP1-212ENST00000638787 CABP4P57796 275 aa11.75□□□□□ -0.53
NECAP1-212ENST00000638787 TXNRD1Q16881 649 aa11.75□□□□□ -0.53
NECAP1-212ENST00000638787 MRS2Q9HD23 443 aa11.75□□□□□ -0.53
NECAP1-212ENST00000638787 MRC1P22897 1456 aa11.75□□□□□ -0.53
NECAP1-212ENST00000638787 LY75O60449 1722 aa11.75□□□□□ -0.53
NECAP1-212ENST00000638787 DLG5Q8TDM6 1919 aa11.75□□□□□ -0.53
NECAP1-212ENST00000638787 PALLDQ8WX93 1383 aa11.74□□□□□ -0.53
NECAP1-212ENST00000638787 SMARCC1Q92922 1105 aaPredicted RBP11.74□□□□□ -0.53
NECAP1-212ENST00000638787 NFE2L2Q16236 605 aa11.74□□□□□ -0.53
NECAP1-212ENST00000638787 CCDC146Q8IYE0 955 aa11.74□□□□□ -0.53
NECAP1-212ENST00000638787 NFATC2IPQ8NCF5 419 aa11.74□□□□□ -0.53
NECAP1-212ENST00000638787 IL17REQ8NFR9 667 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms