RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	REC8	O95072	547 aa		13.45	□□□□□ -0.26
STRADA-231	ENST00000638708	MCM2	P49736	904 aa		13.45	□□□□□ -0.26
STRADA-231	ENST00000638708	KIAA1524	Q8TCG1	905 aa		13.45	□□□□□ -0.26
STRADA-231	ENST00000638708	KIF24	Q5T7B8	1368 aa		13.44	□□□□□ -0.26
STRADA-231	ENST00000638708	CUL4A	Q13619	759 aa		13.44	□□□□□ -0.26
STRADA-231	ENST00000638708	CCDC183	Q5T5S1	534 aa		13.44	□□□□□ -0.26
STRADA-231	ENST00000638708	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.44	□□□□□ -0.26
STRADA-231	ENST00000638708	ZFYVE16	Q7Z3T8	1539 aa		13.43	□□□□□ -0.26
STRADA-231	ENST00000638708	MRPL50	Q8N5N7	158 aa	Known RBP	13.43	□□□□□ -0.26
STRADA-231	ENST00000638708	TMEM87A	Q8NBN3	555 aa		13.43	□□□□□ -0.26
STRADA-231	ENST00000638708	ADGRB1	O14514	1584 aa		13.43	□□□□□ -0.26
STRADA-231	ENST00000638708	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.42	□□□□□ -0.26
STRADA-231	ENST00000638708	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.42	□□□□□ -0.26
STRADA-231	ENST00000638708	INTS4	Q96HW7	963 aa	Known RBP	13.42	□□□□□ -0.26
STRADA-231	ENST00000638708	TMX3	Q96JJ7	454 aa		13.42	□□□□□ -0.26
STRADA-231	ENST00000638708	UGGT1	Q9NYU2	1555 aa		13.42	□□□□□ -0.26
STRADA-231	ENST00000638708	MPND	Q8N594	471 aa		13.42	□□□□□ -0.26
STRADA-231	ENST00000638708	DCTPP1	Q9H773	170 aa		13.42	□□□□□ -0.26
STRADA-231	ENST00000638708	PPL	O60437	1756 aa		13.42	□□□□□ -0.26
STRADA-231	ENST00000638708	TCHH	Q07283	1943 aa		13.41	□□□□□ -0.26
STRADA-231	ENST00000638708	LRRC7	Q96NW7	1537 aa		13.41	□□□□□ -0.26
STRADA-231	ENST00000638708	TUBGCP6	Q96RT7	1819 aa		13.41	□□□□□ -0.26
STRADA-231	ENST00000638708	CCDC66	A2RUB6	948 aa		13.41	□□□□□ -0.26
STRADA-231	ENST00000638708	KDM4A	O75164	1064 aa		13.41	□□□□□ -0.26
STRADA-231	ENST00000638708	NCBP1	Q09161	790 aa	Known RBP	13.41	□□□□□ -0.26
STRADA-231	ENST00000638708	PUS7	Q96PZ0	661 aa	Known RBP	13.41	□□□□□ -0.26
STRADA-231	ENST00000638708	CTNNA3	Q9UI47	895 aa		13.41	□□□□□ -0.26
STRADA-231	ENST00000638708	ADGRB3	O60242	1522 aa		13.41	□□□□□ -0.26
STRADA-231	ENST00000638708	U2SURP	O15042	1029 aa	Known RBP	13.41	□□□□□ -0.26
STRADA-231	ENST00000638708	PDIA4	P13667	645 aa	Known RBP	13.41	□□□□□ -0.26
STRADA-231	ENST00000638708	SDS	P20132	328 aa		13.41	□□□□□ -0.26
STRADA-231	ENST00000638708	CDK11B	P21127	795 aa	Known RBP	13.41	□□□□□ -0.26
STRADA-231	ENST00000638708	KCNF1	Q9H3M0	494 aa		13.41	□□□□□ -0.26
STRADA-231	ENST00000638708	TULP4	Q9NRJ4	1543 aa		13.4	□□□□□ -0.26
STRADA-231	ENST00000638708	ERC2	O15083	957 aa		13.4	□□□□□ -0.26
STRADA-231	ENST00000638708	IGSF3	O75054	1194 aa		13.4	□□□□□ -0.26
STRADA-231	ENST00000638708	SLC20A2	Q08357	652 aa		13.4	□□□□□ -0.26
STRADA-231	ENST00000638708	DDX41	Q9UJV9	622 aa	Known RBP	13.4	□□□□□ -0.26
STRADA-231	ENST00000638708	PYCARD	Q9ULZ3	195 aa		13.4	□□□□□ -0.26
STRADA-231	ENST00000638708	ATAD2	Q6PL18	1390 aa		13.4	□□□□□ -0.26
STRADA-231	ENST00000638708	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.4	□□□□□ -0.26
STRADA-231	ENST00000638708	GADD45B	O75293	160 aa	Predicted RBP	13.39	□□□□□ -0.27
STRADA-231	ENST00000638708	SLFN14	P0C7P3	912 aa		13.39	□□□□□ -0.27
STRADA-231	ENST00000638708	HCLS1	P14317	486 aa	Predicted RBP	13.39	□□□□□ -0.27
STRADA-231	ENST00000638708	GOLGA6L6	A8MZA4	724 aa		13.39	□□□□□ -0.27
STRADA-231	ENST00000638708	MX1	P20591	662 aa		13.39	□□□□□ -0.27
STRADA-231	ENST00000638708	CYB5RL	Q6IPT4	315 aa		13.39	□□□□□ -0.27
STRADA-231	ENST00000638708	ATP10D	Q9P241	1426 aa		13.39	□□□□□ -0.27
STRADA-231	ENST00000638708	USP48	Q86UV5	1035 aa		13.38	□□□□□ -0.27
STRADA-231	ENST00000638708	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.38	□□□□□ -0.27
STRADA-231	ENST00000638708	RTL1	A6NKG5	1358 aa		13.38	□□□□□ -0.27
STRADA-231	ENST00000638708	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.38	□□□□□ -0.27
STRADA-231	ENST00000638708	WDR33	Q9C0J8	1336 aa	Known RBP	13.38	□□□□□ -0.27
STRADA-231	ENST00000638708	RGS12	O14924	1447 aa		13.38	□□□□□ -0.27
STRADA-231	ENST00000638708	EFCAB6	Q5THR3	1501 aa		13.38	□□□□□ -0.27
STRADA-231	ENST00000638708	SMTNL1	A8MU46	457 aa		13.38	□□□□□ -0.27
STRADA-231	ENST00000638708	API5	Q9BZZ5	524 aa	Known RBP	13.38	□□□□□ -0.27
STRADA-231	ENST00000638708	MROH1	Q8NDA8	1641 aa		13.38	□□□□□ -0.27
STRADA-231	ENST00000638708	GLI2	P10070	1586 aa		13.37	□□□□□ -0.27
STRADA-231	ENST00000638708	VAMP4	O75379	141 aa		13.37	□□□□□ -0.27
STRADA-231	ENST00000638708	NEK4	P51957	841 aa		13.37	□□□□□ -0.27
STRADA-231	ENST00000638708	IRX5	P78411	483 aa	Predicted RBP	13.37	□□□□□ -0.27
STRADA-231	ENST00000638708	ARHGEF40	Q8TER5	1519 aa		13.37	□□□□□ -0.27
STRADA-231	ENST00000638708	FAM135B	Q49AJ0	1406 aa		13.37	□□□□□ -0.27
STRADA-231	ENST00000638708	FAM193A	P78312	1265 aa		13.37	□□□□□ -0.27
STRADA-231	ENST00000638708	FUCA2	Q9BTY2	467 aa		13.37	□□□□□ -0.27
STRADA-231	ENST00000638708	SMARCA5	O60264	1052 aa	Predicted RBP	13.36	□□□□□ -0.27
STRADA-231	ENST00000638708	ATP7A	Q04656	1500 aa		13.36	□□□□□ -0.27
STRADA-231	ENST00000638708	CREBRF	Q8IUR6	639 aa		13.35	□□□□□ -0.27
STRADA-231	ENST00000638708	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.35	□□□□□ -0.27
STRADA-231	ENST00000638708	ANKRD44	Q8N8A2	993 aa		13.35	□□□□□ -0.27
STRADA-231	ENST00000638708	FRMPD1	Q5SYB0	1578 aa		13.35	□□□□□ -0.27
STRADA-231	ENST00000638708	MCC	P23508	829 aa		13.35	□□□□□ -0.27
STRADA-231	ENST00000638708	ANAPC15	P60006	121 aa		13.35	□□□□□ -0.27
STRADA-231	ENST00000638708	TERF2	Q15554	542 aa		13.35	□□□□□ -0.27
STRADA-231	ENST00000638708	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.35	□□□□□ -0.27
STRADA-231	ENST00000638708	IL17RA	Q96F46	866 aa		13.35	□□□□□ -0.27
STRADA-231	ENST00000638708	TIGD1	Q96MW7	591 aa		13.35	□□□□□ -0.27
STRADA-231	ENST00000638708	GDPD2	Q9HCC8	539 aa		13.35	□□□□□ -0.27
STRADA-231	ENST00000638708	KIF20B	Q96Q89	1820 aa		13.35	□□□□□ -0.27
STRADA-231	ENST00000638708	SSH2	Q76I76	1423 aa		13.34	□□□□□ -0.27
STRADA-231	ENST00000638708	VGLL3	A8MV65	326 aa		13.34	□□□□□ -0.27
STRADA-231	ENST00000638708	ZBTB22	O15209	634 aa		13.34	□□□□□ -0.27
STRADA-231	ENST00000638708	VGF	O15240	615 aa	Predicted RBP	13.34	□□□□□ -0.27
STRADA-231	ENST00000638708	KCNJ4	P48050	445 aa		13.34	□□□□□ -0.27
STRADA-231	ENST00000638708	UBE2H	P62256	183 aa		13.34	□□□□□ -0.27
STRADA-231	ENST00000638708	KRT222	Q8N1A0	295 aa		13.34	□□□□□ -0.27
STRADA-231	ENST00000638708	KIF18A	Q8NI77	898 aa		13.34	□□□□□ -0.27
STRADA-231	ENST00000638708	DNAJC2	Q99543	621 aa	Known RBP	13.34	□□□□□ -0.27
STRADA-231	ENST00000638708	ZFYVE9	O95405	1425 aa		13.34	□□□□□ -0.27
STRADA-231	ENST00000638708	TRAK1	Q9UPV9	953 aa		13.34	□□□□□ -0.27
STRADA-231	ENST00000638708	EVC2	Q86UK5	1308 aa		13.34	□□□□□ -0.27
STRADA-231	ENST00000638708	PNPLA6	Q8IY17	1366 aa		13.33	□□□□□ -0.27
STRADA-231	ENST00000638708	KIF3B	O15066	747 aa		13.33	□□□□□ -0.28
STRADA-231	ENST00000638708	CALCOCO1	Q9P1Z2	691 aa		13.33	□□□□□ -0.28
STRADA-231	ENST00000638708	AP5Z1	O43299	807 aa		13.32	□□□□□ -0.28
STRADA-231	ENST00000638708	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.32	□□□□□ -0.28
STRADA-231	ENST00000638708	DIAPH1	O60610	1272 aa	Known RBP	13.32	□□□□□ -0.28
STRADA-231	ENST00000638708	SRCIN1	Q9C0H9	1055 aa		13.32	□□□□□ -0.28
STRADA-231	ENST00000638708	PAXBP1	Q9Y5B6	917 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms