RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 ZNF326Q5BKZ1 582 aaKnown RBP10.55□□□□□ -0.72
SCARB2-209ENST00000638409 TRIM52Q96A61 297 aa10.55□□□□□ -0.72
SCARB2-209ENST00000638409 UHRF1BP1Q6BDS2 1440 aa10.55□□□□□ -0.72
SCARB2-209ENST00000638409 SYNMO15061 1565 aa10.55□□□□□ -0.72
SCARB2-209ENST00000638409 RSBN1LQ6PCB5 846 aaPredicted RBP10.55□□□□□ -0.72
SCARB2-209ENST00000638409 PPME1Q9Y570 386 aa10.55□□□□□ -0.72
SCARB2-209ENST00000638409 KDM5AP29375 1690 aaKnown RBP10.54□□□□□ -0.72
SCARB2-209ENST00000638409 RBM46Q8TBY0 533 aaKnown RBP10.54□□□□□ -0.72
SCARB2-209ENST00000638409 PIK3C2BO00750 1634 aa10.54□□□□□ -0.72
SCARB2-209ENST00000638409 A2ML1A8K2U0 1454 aa10.54□□□□□ -0.72
SCARB2-209ENST00000638409 LILRB3O75022 631 aa10.54□□□□□ -0.72
SCARB2-209ENST00000638409 ARID4AP29374 1257 aaPredicted RBP10.54□□□□□ -0.72
SCARB2-209ENST00000638409 MPHOSPH9Q99550 1183 aa10.54□□□□□ -0.72
SCARB2-209ENST00000638409 SLC52A1Q9NWF4 448 aa10.54□□□□□ -0.72
SCARB2-209ENST00000638409 SPHKAPQ2M3C7 1700 aa10.54□□□□□ -0.72
SCARB2-209ENST00000638409 CEP170BQ9Y4F5 1589 aaPredicted RBP10.54□□□□□ -0.72
SCARB2-209ENST00000638409 EPS8L1Q8TE68 723 aa10.54□□□□□ -0.72
SCARB2-209ENST00000638409 CDCA7Q9BWT1 371 aaPredicted RBP10.54□□□□□ -0.72
SCARB2-209ENST00000638409 LNPKQ9C0E8 428 aa10.54□□□□□ -0.72
SCARB2-209ENST00000638409 RIPOR2Q9Y4F9 1068 aa10.54□□□□□ -0.72
SCARB2-209ENST00000638409 CFAP65Q6ZU64 1925 aaKnown RBP10.53□□□□□ -0.72
SCARB2-209ENST00000638409 SBNO2Q9Y2G9 1366 aa10.53□□□□□ -0.72
SCARB2-209ENST00000638409 SPTLC1O15269 473 aa10.53□□□□□ -0.72
SCARB2-209ENST00000638409 VAMP1P23763 118 aa10.53□□□□□ -0.72
SCARB2-209ENST00000638409 VTI1AQ96AJ9 217 aa10.53□□□□□ -0.72
SCARB2-209ENST00000638409 RBM33Q96EV2 1170 aaKnown RBP10.53□□□□□ -0.72
SCARB2-209ENST00000638409 MAP3K7O43318 606 aa10.52□□□□□ -0.73
SCARB2-209ENST00000638409 FBXO33Q7Z6M2 555 aa10.52□□□□□ -0.73
SCARB2-209ENST00000638409 PXYLP1Q8TE99 480 aa10.52□□□□□ -0.73
SCARB2-209ENST00000638409 BACH2Q9BYV9 841 aa10.52□□□□□ -0.73
SCARB2-209ENST00000638409 NOVA2Q9UNW9 492 aaKnown RBP10.52□□□□□ -0.73
SCARB2-209ENST00000638409 TRPM2O94759 1503 aa10.52□□□□□ -0.73
SCARB2-209ENST00000638409 TMEM106CQ9BVX2 250 aa10.51□□□□□ -0.73
SCARB2-209ENST00000638409 PLA2R1Q13018 1463 aa10.51□□□□□ -0.73
SCARB2-209ENST00000638409 NUTM2BA6NNL0 878 aaPredicted RBP10.51□□□□□ -0.73
SCARB2-209ENST00000638409 NUTM2EB1AL46 878 aaPredicted RBP10.51□□□□□ -0.73
SCARB2-209ENST00000638409 DIXDC1Q155Q3 683 aa10.51□□□□□ -0.73
SCARB2-209ENST00000638409 NUTM2DQ5VT03 806 aaPredicted RBP10.51□□□□□ -0.73
SCARB2-209ENST00000638409 NUTM2AQ8IVF1 878 aaPredicted RBP10.51□□□□□ -0.73
SCARB2-209ENST00000638409 AKT1S1Q96B36 256 aa10.51□□□□□ -0.73
SCARB2-209ENST00000638409 L3MBTL3Q96JM7 780 aaPredicted RBP10.51□□□□□ -0.73
SCARB2-209ENST00000638409 TRPC6Q9Y210 931 aa10.51□□□□□ -0.73
SCARB2-209ENST00000638409 SUGT1Q9Y2Z0 365 aa10.51□□□□□ -0.73
SCARB2-209ENST00000638409 UBR1Q8IWV7 1749 aa10.51□□□□□ -0.73
SCARB2-209ENST00000638409 MICALL2Q8IY33 904 aa10.5□□□□□ -0.73
SCARB2-209ENST00000638409 CTDSPL2Q05D32 466 aa10.5□□□□□ -0.73
SCARB2-209ENST00000638409 DHX38Q92620 1227 aaKnown RBP10.5□□□□□ -0.73
SCARB2-209ENST00000638409 KLHL42Q9P2K6 505 aa10.5□□□□□ -0.73
SCARB2-209ENST00000638409 UGGT1Q9NYU2 1555 aa10.5□□□□□ -0.73
SCARB2-209ENST00000638409 PITPNM1O00562 1244 aa10.49□□□□□ -0.73
SCARB2-209ENST00000638409 EVI5O60447 810 aa10.49□□□□□ -0.73
SCARB2-209ENST00000638409 IDI1Q13907 227 aa10.49□□□□□ -0.73
SCARB2-209ENST00000638409 PIK3CDO00329 1044 aa10.49□□□□□ -0.73
SCARB2-209ENST00000638409 TANGO6Q9C0B7 1094 aa10.49□□□□□ -0.73
SCARB2-209ENST00000638409 RBM27Q9P2N5 1060 aaKnown RBP10.49□□□□□ -0.73
SCARB2-209ENST00000638409 TMEM131LA2VDJ0 1609 aa10.48□□□□□ -0.73
SCARB2-209ENST00000638409 ADGRB3O60242 1522 aa10.48□□□□□ -0.73
SCARB2-209ENST00000638409 HDLBPQ00341 1268 aaKnown RBP10.48□□□□□ -0.73
SCARB2-209ENST00000638409 EN1Q05925 392 aaPredicted RBP10.48□□□□□ -0.73
SCARB2-209ENST00000638409 BCCIPQ9P287 314 aaKnown RBP eCLIP10.48□□□□□ -0.73
SCARB2-209ENST00000638409 CLSTN1O94985 981 aa10.48□□□□□ -0.73
SCARB2-209ENST00000638409 THEMISQ8N1K5 641 aaPredicted RBP10.48□□□□□ -0.73
SCARB2-209ENST00000638409 CLTCL1P53675 1640 aa10.47□□□□□ -0.73
SCARB2-209ENST00000638409 ATP9BO43861 1147 aa10.47□□□□□ -0.73
SCARB2-209ENST00000638409 LRRN4Q8WUT4 740 aa10.47□□□□□ -0.73
SCARB2-209ENST00000638409 SLIT1O75093 1534 aa10.47□□□□□ -0.73
SCARB2-209ENST00000638409 NEURL4Q96JN8 1562 aa10.47□□□□□ -0.73
SCARB2-209ENST00000638409 ARHGAP23Q9P227 1491 aa10.47□□□□□ -0.73
SCARB2-209ENST00000638409 PIK3R5Q8WYR1 880 aa10.46□□□□□ -0.73
SCARB2-209ENST00000638409 STRCQ7RTU9 1775 aa10.46□□□□□ -0.74
SCARB2-209ENST00000638409 CRTC2Q53ET0 693 aaPredicted RBP10.46□□□□□ -0.74
SCARB2-209ENST00000638409 ADGRG1Q9Y653 693 aa10.46□□□□□ -0.74
SCARB2-209ENST00000638409 ANKRD30BQ9BXX2 1392 aa10.46□□□□□ -0.74
SCARB2-209ENST00000638409 ANO2Q9NQ90 1003 aa10.45□□□□□ -0.74
SCARB2-209ENST00000638409 KIF1BO60333 1816 aa10.45□□□□□ -0.74
SCARB2-209ENST00000638409 KIF3CO14782 793 aa10.45□□□□□ -0.74
SCARB2-209ENST00000638409 ELOAQ14241 798 aaKnown RBP10.45□□□□□ -0.74
SCARB2-209ENST00000638409 PADI6Q6TGC4 694 aa10.45□□□□□ -0.74
SCARB2-209ENST00000638409 IQSEC3Q9UPP2 1182 aaPredicted RBP10.45□□□□□ -0.74
SCARB2-209ENST00000638409 SEMA3FQ13275 785 aa10.44□□□□□ -0.74
SCARB2-209ENST00000638409 LARGE2Q8N3Y3 721 aa10.44□□□□□ -0.74
SCARB2-209ENST00000638409 OATP04181 439 aa10.44□□□□□ -0.74
SCARB2-209ENST00000638409 HSPA2P54652 639 aa10.44□□□□□ -0.74
SCARB2-209ENST00000638409 DEPDC4Q8N2C3 294 aa10.44□□□□□ -0.74
SCARB2-209ENST00000638409 POLR1AO95602 1720 aaPredicted RBP10.44□□□□□ -0.74
SCARB2-209ENST00000638409 MYO5BQ9ULV0 1848 aa10.44□□□□□ -0.74
SCARB2-209ENST00000638409 RAD51AP2Q09MP3 1159 aa10.43□□□□□ -0.74
SCARB2-209ENST00000638409 TUSC1Q2TAM9 212 aa10.43□□□□□ -0.74
SCARB2-209ENST00000638409 CCDC144BQ3MJ40 725 aa10.43□□□□□ -0.74
SCARB2-209ENST00000638409 PIF1Q9H611 641 aa10.43□□□□□ -0.74
SCARB2-209ENST00000638409 TMA7Q9Y2S6 64 aaKnown RBP10.43□□□□□ -0.74
SCARB2-209ENST00000638409 TMEM2Q9UHN6 1383 aa10.43□□□□□ -0.74
SCARB2-209ENST00000638409 CCDC144AA2RUR9 1427 aa10.43□□□□□ -0.74
SCARB2-209ENST00000638409 MED14O60244 1454 aa10.43□□□□□ -0.74
SCARB2-209ENST00000638409 ZFYVE9O95405 1425 aa10.42□□□□□ -0.74
SCARB2-209ENST00000638409 DHX57Q6P158 1386 aaKnown RBP10.42□□□□□ -0.74
SCARB2-209ENST00000638409 ILDR1Q86SU0 546 aaPredicted RBP10.42□□□□□ -0.74
SCARB2-209ENST00000638409 NLGN1Q8N2Q7 840 aa10.42□□□□□ -0.74
SCARB2-209ENST00000638409 ZNF211Q13398 564 aaPredicted RBP10.42□□□□□ -0.74
SCARB2-209ENST00000638409 SPATA31E1Q6ZUB1 1445 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms