RNA–Protein interactions for RNA: ENST00000638251.1

RTTN-211, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-211ENST00000638251 BTBD11A6QL63 1104 aa8.71□□□□□ -1.02
RTTN-211ENST00000638251 AKAP4Q5JQC9 854 aa8.71□□□□□ -1.02
RTTN-211ENST00000638251 DDX58O95786 925 aaKnown RBP8.7□□□□□ -1.02
RTTN-211ENST00000638251 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.7□□□□□ -1.02
RTTN-211ENST00000638251 FAM83GA6ND36 823 aa8.7□□□□□ -1.02
RTTN-211ENST00000638251 CHRNA2Q15822 529 aa8.7□□□□□ -1.02
RTTN-211ENST00000638251 ARXQ96QS3 562 aa8.7□□□□□ -1.02
RTTN-211ENST00000638251 XRN1Q8IZH2 1706 aaKnown RBP8.7□□□□□ -1.02
RTTN-211ENST00000638251 CABP4P57796 275 aa8.7□□□□□ -1.02
RTTN-211ENST00000638251 CABLES1Q8TDN4 633 aa8.7□□□□□ -1.02
RTTN-211ENST00000638251 IGSF1Q8N6C5 1336 aa8.7□□□□□ -1.02
RTTN-211ENST00000638251 SETD1AO15047 1707 aaKnown RBP8.7□□□□□ -1.02
RTTN-211ENST00000638251 FKBP5Q13451 457 aaPredicted RBP8.69□□□□□ -1.02
RTTN-211ENST00000638251 ARHGEF25Q86VW2 580 aa8.69□□□□□ -1.02
RTTN-211ENST00000638251 IFNL2Q8IZJ0 200 aa8.69□□□□□ -1.02
RTTN-211ENST00000638251 SSH1Q8WYL5 1049 aa8.69□□□□□ -1.02
RTTN-211ENST00000638251 BABAM1Q9NWV8 329 aa8.69□□□□□ -1.02
RTTN-211ENST00000638251 MVPQ14764 893 aaKnown RBP8.69□□□□□ -1.02
RTTN-211ENST00000638251 DDX17Q92841 729 aaKnown RBP8.69□□□□□ -1.02
RTTN-211ENST00000638251 NUTM2BA6NNL0 878 aaPredicted RBP8.69□□□□□ -1.02
RTTN-211ENST00000638251 NUTM2EB1AL46 878 aaPredicted RBP8.69□□□□□ -1.02
RTTN-211ENST00000638251 HDGFL1Q5TGJ6 251 aa8.69□□□□□ -1.02
RTTN-211ENST00000638251 BRINP3Q76B58 766 aa8.69□□□□□ -1.02
RTTN-211ENST00000638251 NUTM2AQ8IVF1 878 aaPredicted RBP8.69□□□□□ -1.02
RTTN-211ENST00000638251 TRMT2AQ8IZ69 625 aaKnown RBP8.69□□□□□ -1.02
RTTN-211ENST00000638251 TNS3Q68CZ2 1445 aa8.68□□□□□ -1.02
RTTN-211ENST00000638251 RNF123Q5XPI4 1314 aa8.68□□□□□ -1.02
RTTN-211ENST00000638251 SLC4A2P04920 1241 aa8.68□□□□□ -1.02
RTTN-211ENST00000638251 SOS1Q07889 1333 aaPredicted RBP8.68□□□□□ -1.02
RTTN-211ENST00000638251 UBAP1LF5GYI3 381 aa8.68□□□□□ -1.02
RTTN-211ENST00000638251 NECTIN2Q92692 538 aa8.68□□□□□ -1.02
RTTN-211ENST00000638251 SPINK5Q9NQ38 1064 aaPredicted RBP8.68□□□□□ -1.02
RTTN-211ENST00000638251 USP35Q9P2H5 1018 aa8.68□□□□□ -1.02
RTTN-211ENST00000638251 SPATA31A3Q5VYP0 1347 aa8.68□□□□□ -1.02
RTTN-211ENST00000638251 ANKRD26Q9UPS8 1709 aa8.67□□□□□ -1.02
RTTN-211ENST00000638251 CCT4P50991 539 aaKnown RBP8.67□□□□□ -1.02
RTTN-211ENST00000638251 NEXNQ0ZGT2 675 aa8.67□□□□□ -1.02
RTTN-211ENST00000638251 OS9Q13438 667 aaPredicted RBP8.67□□□□□ -1.02
RTTN-211ENST00000638251 NBPF6Q5VWK0 638 aa8.67□□□□□ -1.02
RTTN-211ENST00000638251 CASC1Q6TDU7 716 aa8.67□□□□□ -1.02
RTTN-211ENST00000638251 MPRIPQ6WCQ1 1025 aa8.67□□□□□ -1.02
RTTN-211ENST00000638251 NBPF4Q96M43 638 aa8.67□□□□□ -1.02
RTTN-211ENST00000638251 ARHGAP45Q92619 1136 aa8.67□□□□□ -1.02
RTTN-211ENST00000638251 MIS18AQ9NYP9 233 aa8.67□□□□□ -1.02
RTTN-211ENST00000638251 PTPRCP08575 1304 aa8.67□□□□□ -1.02
RTTN-211ENST00000638251 FMN2Q9NZ56 1722 aa8.66□□□□□ -1.02
RTTN-211ENST00000638251 DDX54Q8TDD1 881 aaKnown RBP8.66□□□□□ -1.02
RTTN-211ENST00000638251 KIF1AQ12756 1690 aa8.66□□□□□ -1.02
RTTN-211ENST00000638251 MST1RQ04912 1400 aa8.66□□□□□ -1.02
RTTN-211ENST00000638251 MON2Q7Z3U7 1717 aa8.65□□□□□ -1.02
RTTN-211ENST00000638251 ZCRB1Q8TBF4 217 aaKnown RBP8.65□□□□□ -1.02
RTTN-211ENST00000638251 CHD2O14647 1828 aaKnown RBP8.65□□□□□ -1.02
RTTN-211ENST00000638251 COL3A1P02461 1466 aaPredicted RBP8.65□□□□□ -1.02
RTTN-211ENST00000638251 LRRC7Q96NW7 1537 aa8.65□□□□□ -1.02
RTTN-211ENST00000638251 CHL1O00533 1208 aa8.65□□□□□ -1.02
RTTN-211ENST00000638251 GNAI3P08754 354 aa8.65□□□□□ -1.02
RTTN-211ENST00000638251 IL2RBP14784 551 aa8.65□□□□□ -1.02
RTTN-211ENST00000638251 C20orf194Q5TEA3 1177 aa8.65□□□□□ -1.02
RTTN-211ENST00000638251 ADAMTS2O95450 1211 aa8.65□□□□□ -1.03
RTTN-211ENST00000638251 DDRGK1Q96HY6 314 aa8.65□□□□□ -1.03
RTTN-211ENST00000638251 VAMP4O75379 141 aa8.64□□□□□ -1.03
RTTN-211ENST00000638251 PHF23Q9BUL5 403 aaPredicted RBP8.64□□□□□ -1.03
RTTN-211ENST00000638251 SSH2Q76I76 1423 aa8.64□□□□□ -1.03
RTTN-211ENST00000638251 MRPL50Q8N5N7 158 aaKnown RBP8.64□□□□□ -1.03
RTTN-211ENST00000638251 SYTL4Q96C24 671 aaPredicted RBP8.64□□□□□ -1.03
RTTN-211ENST00000638251 USP19O94966 1318 aa8.64□□□□□ -1.03
RTTN-211ENST00000638251 NWD1Q149M9 1564 aa8.64□□□□□ -1.03
RTTN-211ENST00000638251 IQSEC2Q5JU85 1478 aa8.64□□□□□ -1.03
RTTN-211ENST00000638251 RNMTO43148 476 aaKnown RBP8.64□□□□□ -1.03
RTTN-211ENST00000638251 TRIM27P14373 513 aa8.64□□□□□ -1.03
RTTN-211ENST00000638251 ZNF330Q9Y3S2 320 aaPredicted RBP8.64□□□□□ -1.03
RTTN-211ENST00000638251 PCDH11XQ9BZA7 1347 aa8.64□□□□□ -1.03
RTTN-211ENST00000638251 PCDH11YQ9BZA8 1340 aa8.64□□□□□ -1.03
RTTN-211ENST00000638251 KIAA0232Q92628 1395 aa8.64□□□□□ -1.03
RTTN-211ENST00000638251 AKAP12Q02952 1782 aa8.64□□□□□ -1.03
RTTN-211ENST00000638251 TMEM57Q8N5G2 664 aa8.64□□□□□ -1.03
RTTN-211ENST00000638251 C8orf58Q8NAV2 365 aa8.64□□□□□ -1.03
RTTN-211ENST00000638251 DCAF5Q96JK2 942 aa8.64□□□□□ -1.03
RTTN-211ENST00000638251 RIC3Q7Z5B4 369 aa8.63□□□□□ -1.03
RTTN-211ENST00000638251 C9orf78Q9NZ63 289 aaPredicted RBP8.63□□□□□ -1.03
RTTN-211ENST00000638251 EXOC5O00471 708 aa8.63□□□□□ -1.03
RTTN-211ENST00000638251 TMOD3Q9NYL9 352 aa8.63□□□□□ -1.03
RTTN-211ENST00000638251 ERBB3P21860 1342 aa8.63□□□□□ -1.03
RTTN-211ENST00000638251 CDCA7Q9BWT1 371 aaPredicted RBP8.63□□□□□ -1.03
RTTN-211ENST00000638251 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.63□□□□□ -1.031e-6■■■■□ 21.1
RTTN-211ENST00000638251 FMNL2Q96PY5 1086 aa8.62□□□□□ -1.03
RTTN-211ENST00000638251 BTG4Q9NY30 223 aa8.62□□□□□ -1.03
RTTN-211ENST00000638251 TOPAZ1Q8N9V7 1692 aa8.62□□□□□ -1.03
RTTN-211ENST00000638251 UBTFL1P0CB47 393 aaPredicted RBP8.62□□□□□ -1.03
RTTN-211ENST00000638251 GCC1Q96CN9 775 aa8.62□□□□□ -1.03
RTTN-211ENST00000638251 DBF4Q9UBU7 674 aaPredicted RBP8.62□□□□□ -1.03
RTTN-211ENST00000638251 GNAI2P04899 355 aa8.61□□□□□ -1.03
RTTN-211ENST00000638251 HOXB7P09629 217 aa8.61□□□□□ -1.03
RTTN-211ENST00000638251 SRCIN1Q9C0H9 1055 aa8.61□□□□□ -1.03
RTTN-211ENST00000638251 HYPKQ9NX55 129 aa8.61□□□□□ -1.03
RTTN-211ENST00000638251 ANKRD45Q5TZF3 282 aa8.61□□□□□ -1.03
RTTN-211ENST00000638251 NGLY1Q96IV0 654 aa8.61□□□□□ -1.03
RTTN-211ENST00000638251 MAP2P11137 1827 aaKnown RBP8.61□□□□□ -1.03
RTTN-211ENST00000638251 ZNF853P0CG23 659 aa8.61□□□□□ -1.03
RTTN-211ENST00000638251 NALCNQ8IZF0 1738 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms