RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 CHL1O00533 1208 aa15.73■□□□□ 0.11
CACNA1D-228ENST00000638120 MS4A1P11836 297 aa15.73■□□□□ 0.11
CACNA1D-228ENST00000638120 BRPF1P55201 1214 aaPredicted RBP15.73■□□□□ 0.11
CACNA1D-228ENST00000638120 USHBP1Q8N6Y0 703 aa15.73■□□□□ 0.11
CACNA1D-228ENST00000638120 TSPYL6Q8N831 410 aa15.73■□□□□ 0.11
CACNA1D-228ENST00000638120 RTF1Q92541 710 aaKnown RBP15.73■□□□□ 0.11
CACNA1D-228ENST00000638120 SPATA31A3Q5VYP0 1347 aa15.72■□□□□ 0.11
CACNA1D-228ENST00000638120 AAMPQ13685 434 aa15.72■□□□□ 0.11
CACNA1D-228ENST00000638120 RGPD5Q99666 1765 aa15.72■□□□□ 0.11
CACNA1D-228ENST00000638120 MAP3K5Q99683 1374 aa15.72■□□□□ 0.11
CACNA1D-228ENST00000638120 LMO7Q8WWI1 1683 aa15.71■□□□□ 0.11
CACNA1D-228ENST00000638120 PLEKHG5O94827 1062 aa15.71■□□□□ 0.11
CACNA1D-228ENST00000638120 TWISTNBQ3B726 338 aaPredicted RBP15.71■□□□□ 0.11
CACNA1D-228ENST00000638120 DZIP1LQ8IYY4 767 aaKnown RBP15.71■□□□□ 0.11
CACNA1D-228ENST00000638120 COL18A1P39060 1754 aa15.71■□□□□ 0.11
CACNA1D-228ENST00000638120 TRIM27P14373 513 aa15.71■□□□□ 0.1
CACNA1D-228ENST00000638120 ATF7IPQ6VMQ6 1270 aa15.71■□□□□ 0.1
CACNA1D-228ENST00000638120 CENPQQ7L2Z9 268 aaPredicted RBP15.71■□□□□ 0.1
CACNA1D-228ENST00000638120 ANKRD24Q8TF21 1146 aa15.71■□□□□ 0.1
CACNA1D-228ENST00000638120 CLUAP1Q96AJ1 413 aa15.71■□□□□ 0.1
CACNA1D-228ENST00000638120 KIAA0232Q92628 1395 aa15.7■□□□□ 0.1
CACNA1D-228ENST00000638120 GNAT3A8MTJ3 354 aa15.7■□□□□ 0.1
CACNA1D-228ENST00000638120 FTSJ3Q8IY81 847 aaKnown RBP15.7■□□□□ 0.1
CACNA1D-228ENST00000638120 C8orf58Q8NAV2 365 aa15.7■□□□□ 0.1
CACNA1D-228ENST00000638120 LRRC59Q96AG4 307 aaKnown RBP15.7■□□□□ 0.1
CACNA1D-228ENST00000638120 SLAIN2Q9P270 581 aa15.7■□□□□ 0.1
CACNA1D-228ENST00000638120 NOB1Q9ULX3 412 aaKnown RBP15.7■□□□□ 0.1
CACNA1D-228ENST00000638120 IPO8O15397 1037 aaKnown RBP15.69■□□□□ 0.1
CACNA1D-228ENST00000638120 MVPQ14764 893 aaKnown RBP15.69■□□□□ 0.1
CACNA1D-228ENST00000638120 AXIN2Q9Y2T1 843 aa15.69■□□□□ 0.1
CACNA1D-228ENST00000638120 ZC3H6P61129 1189 aaKnown RBP15.68■□□□□ 0.1
CACNA1D-228ENST00000638120 ERBB3P21860 1342 aa15.68■□□□□ 0.1
CACNA1D-228ENST00000638120 NHSL1Q5SYE7 1610 aa15.68■□□□□ 0.1
CACNA1D-228ENST00000638120 FAM208AQ9UK61 1670 aaKnown RBP15.68■□□□□ 0.1
CACNA1D-228ENST00000638120 SOS2Q07890 1332 aaPredicted RBP15.68■□□□□ 0.1
CACNA1D-228ENST00000638120 MRPL50Q8N5N7 158 aaKnown RBP15.68■□□□□ 0.1
CACNA1D-228ENST00000638120 ELL2O00472 640 aaPredicted RBP15.67■□□□□ 0.1
CACNA1D-228ENST00000638120 HAP1P54257 671 aaPredicted RBP15.67■□□□□ 0.1
CACNA1D-228ENST00000638120 CPDO75976 1380 aa15.66■□□□□ 0.1
CACNA1D-228ENST00000638120 ARHGAP45Q92619 1136 aa15.66■□□□□ 0.1
CACNA1D-228ENST00000638120 TSPYL4Q9UJ04 414 aa15.66■□□□□ 0.1
CACNA1D-228ENST00000638120 ABCA3Q99758 1704 aa15.65■□□□□ 0.1
CACNA1D-228ENST00000638120 IL17REQ8NFR9 667 aa15.65■□□□□ 0.1
CACNA1D-228ENST00000638120 CABLES1Q8TDN4 633 aa15.65■□□□□ 0.1
CACNA1D-228ENST00000638120 CEMIPQ8WUJ3 1361 aa15.64■□□□□ 0.1
CACNA1D-228ENST00000638120 KRT24Q2M2I5 525 aa15.64■□□□□ 0.09
CACNA1D-228ENST00000638120 AMOTQ4VCS5 1084 aa15.64■□□□□ 0.09
CACNA1D-228ENST00000638120 BABAM1Q9NWV8 329 aa15.64■□□□□ 0.09
CACNA1D-228ENST00000638120 DDX19BQ9UMR2 479 aa15.64■□□□□ 0.09
CACNA1D-228ENST00000638120 PLEKHO1Q53GL0 409 aaPredicted RBP15.63■□□□□ 0.09
CACNA1D-228ENST00000638120 TMEM57Q8N5G2 664 aa15.63■□□□□ 0.09
CACNA1D-228ENST00000638120 RBM19Q9Y4C8 960 aaKnown RBP15.63■□□□□ 0.09
CACNA1D-228ENST00000638120 TCERG1O14776 1098 aaKnown RBP15.62■□□□□ 0.09
CACNA1D-228ENST00000638120 AKAP4Q5JQC9 854 aa15.62■□□□□ 0.09
CACNA1D-228ENST00000638120 ITPRIPQ8IWB1 547 aa15.62■□□□□ 0.09
CACNA1D-228ENST00000638120 MIS18AQ9NYP9 233 aa15.62■□□□□ 0.09
CACNA1D-228ENST00000638120 OVOS2A0A0G2JMS6 1433 aa15.61■□□□□ 0.09
CACNA1D-228ENST00000638120 ZNF530Q6P9A1 599 aaPredicted RBP15.61■□□□□ 0.09
CACNA1D-228ENST00000638120 VIRMAQ69YN4 1812 aaKnown RBP15.61■□□□□ 0.09
CACNA1D-228ENST00000638120 ABCC4O15439 1325 aa15.61■□□□□ 0.09
CACNA1D-228ENST00000638120 IGHDP01880 384 aa15.61■□□□□ 0.09
CACNA1D-228ENST00000638120 KDM3BQ7LBC6 1761 aa15.61■□□□□ 0.09
CACNA1D-228ENST00000638120 PLEKHG2Q9H7P9 1386 aa15.61■□□□□ 0.09
CACNA1D-228ENST00000638120 ADAMTS7Q9UKP4 1686 aa15.6■□□□□ 0.09
CACNA1D-228ENST00000638120 TAF7Q15545 349 aaPredicted RBP15.6■□□□□ 0.09
CACNA1D-228ENST00000638120 PCDHB15Q9Y5E8 787 aa15.6■□□□□ 0.09
CACNA1D-228ENST00000638120 CHRNA2Q15822 529 aa15.59■□□□□ 0.09
CACNA1D-228ENST00000638120 API5Q9BZZ5 524 aaKnown RBP15.59■□□□□ 0.09
CACNA1D-228ENST00000638120 SOS1Q07889 1333 aaPredicted RBP15.59■□□□□ 0.09
CACNA1D-228ENST00000638120 LTBP4Q8N2S1 1624 aa15.58■□□□□ 0.09
CACNA1D-228ENST00000638120 C1orf141Q5JVX7 400 aa15.58■□□□□ 0.08
CACNA1D-228ENST00000638120 NLRP2Q9NX02 1062 aa15.58■□□□□ 0.08
CACNA1D-228ENST00000638120 ZBTB40Q9NUA8 1239 aa15.57■□□□□ 0.08
CACNA1D-228ENST00000638120 MEGF6O75095 1541 aa15.57■□□□□ 0.08
CACNA1D-228ENST00000638120 RGS12O14924 1447 aa15.57■□□□□ 0.08
CACNA1D-228ENST00000638120 CSB-PGBD3P0DP91 1061 aa15.57■□□□□ 0.08
CACNA1D-228ENST00000638120 SKAP1Q86WV1 359 aa15.57■□□□□ 0.08
CACNA1D-228ENST00000638120 RAPGEF4Q8WZA2 1011 aa15.57■□□□□ 0.08
CACNA1D-228ENST00000638120 LGR6Q9HBX8 967 aa15.57■□□□□ 0.08
CACNA1D-228ENST00000638120 PKD1L3Q7Z443 1732 aa15.56■□□□□ 0.08
CACNA1D-228ENST00000638120 SIPA1L3O60292 1781 aaPredicted RBP15.56■□□□□ 0.08
CACNA1D-228ENST00000638120 ROBO1Q9Y6N7 1651 aa15.56■□□□□ 0.08
CACNA1D-228ENST00000638120 PTPRCP08575 1304 aa15.56■□□□□ 0.08
CACNA1D-228ENST00000638120 RNMTO43148 476 aaKnown RBP15.55■□□□□ 0.08
CACNA1D-228ENST00000638120 CHMP4BQ9H444 224 aaKnown RBP15.55■□□□□ 0.08
CACNA1D-228ENST00000638120 RWDD1Q9H446 243 aaPredicted RBP15.55■□□□□ 0.08
CACNA1D-228ENST00000638120 PRDM11Q9NQV5 511 aa15.55■□□□□ 0.08
CACNA1D-228ENST00000638120 AHDC1Q5TGY3 1603 aaPredicted RBP15.55■□□□□ 0.08
CACNA1D-228ENST00000638120 TATP17735 454 aaPredicted RBP15.54■□□□□ 0.08
CACNA1D-228ENST00000638120 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.54■□□□□ 0.08
CACNA1D-228ENST00000638120 COL5A2P05997 1499 aaPredicted RBP15.54■□□□□ 0.08
CACNA1D-228ENST00000638120 TEFQ10587 303 aa15.54■□□□□ 0.08
CACNA1D-228ENST00000638120 MPRIPQ6WCQ1 1025 aa15.54■□□□□ 0.08
CACNA1D-228ENST00000638120 CACNA1FO60840 1977 aa15.54■□□□□ 0.08
CACNA1D-228ENST00000638120 SCN11AQ9UI33 1791 aa15.53■□□□□ 0.08
CACNA1D-228ENST00000638120 ZBTB7BO15156 539 aaPredicted RBP15.53■□□□□ 0.08
CACNA1D-228ENST00000638120 HDAC1Q13547 482 aaPredicted RBP15.53■□□□□ 0.08
CACNA1D-228ENST00000638120 PARP4Q9UKK3 1724 aaKnown RBP15.53■□□□□ 0.08
CACNA1D-228ENST00000638120 SLC4A2P04920 1241 aa15.52■□□□□ 0.08
CACNA1D-228ENST00000638120 CCDC30Q5VVM6 783 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms