RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 CDC42BPGQ6DT37 1551 aa12.12□□□□□ -0.47
CACNA1A-248ENST00000637774 HDGFL1Q5TGJ6 251 aa12.12□□□□□ -0.47
CACNA1A-248ENST00000637774 KCNH5Q8NCM2 988 aa12.12□□□□□ -0.47
CACNA1A-248ENST00000637774 USP35Q9P2H5 1018 aa12.12□□□□□ -0.47
CACNA1A-248ENST00000637774 NCBP3Q53F19 620 aaKnown RBP12.12□□□□□ -0.47
CACNA1A-248ENST00000637774 C19orf44Q9H6X5 657 aa12.12□□□□□ -0.47
CACNA1A-248ENST00000637774 LGR6Q9HBX8 967 aa12.12□□□□□ -0.47
CACNA1A-248ENST00000637774 ZNF853P0CG23 659 aa12.11□□□□□ -0.47
CACNA1A-248ENST00000637774 ANKRD24Q8TF21 1146 aa12.11□□□□□ -0.47
CACNA1A-248ENST00000637774 ZBTB7BO15156 539 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-248ENST00000637774 RAPGEF4Q8WZA2 1011 aa12.1□□□□□ -0.47
CACNA1A-248ENST00000637774 ARXQ96QS3 562 aa12.1□□□□□ -0.47
CACNA1A-248ENST00000637774 MEIS3Q99687 375 aa12.1□□□□□ -0.47
CACNA1A-248ENST00000637774 USP32Q8NFA0 1604 aa12.1□□□□□ -0.47
CACNA1A-248ENST00000637774 TAF7Q15545 349 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-248ENST00000637774 CHD1LQ86WJ1 897 aa12.1□□□□□ -0.47
CACNA1A-248ENST00000637774 IL17REQ8NFR9 667 aa12.1□□□□□ -0.47
CACNA1A-248ENST00000637774 IP6K1Q92551 441 aa12.1□□□□□ -0.47
CACNA1A-248ENST00000637774 FER1L4A9Z1Z3 1794 aa12.1□□□□□ -0.47
CACNA1A-248ENST00000637774 AIMP1Q12904 312 aaKnown RBP12.1□□□□□ -0.47
CACNA1A-248ENST00000637774 PLEKHO1Q53GL0 409 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-248ENST00000637774 NPHP4O75161 1426 aaPredicted RBP12.09□□□□□ -0.47
CACNA1A-248ENST00000637774 CCDC30Q5VVM6 783 aa12.09□□□□□ -0.47
CACNA1A-248ENST00000637774 C3P01024 1663 aa12.09□□□□□ -0.47
CACNA1A-248ENST00000637774 OVOS2A0A0J9YW53 1432 aa12.09□□□□□ -0.47
CACNA1A-248ENST00000637774 OVOS2Q6IE36 1432 aa12.09□□□□□ -0.47
CACNA1A-248ENST00000637774 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.09□□□□□ -0.47
CACNA1A-248ENST00000637774 SMARCA5O60264 1052 aaPredicted RBP12.09□□□□□ -0.47
CACNA1A-248ENST00000637774 BECN1Q14457 450 aa12.09□□□□□ -0.47
CACNA1A-248ENST00000637774 BTBD11A6QL63 1104 aa12.09□□□□□ -0.47
CACNA1A-248ENST00000637774 HSP90AA1P07900 732 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-248ENST00000637774 RIMS1Q86UR5 1692 aaKnown RBP12.08□□□□□ -0.48
CACNA1A-248ENST00000637774 IGSF1Q8N6C5 1336 aa12.07□□□□□ -0.48
CACNA1A-248ENST00000637774 PTCH1Q13635 1447 aa12.07□□□□□ -0.48
CACNA1A-248ENST00000637774 KCNQ3O43525 872 aa12.07□□□□□ -0.48
CACNA1A-248ENST00000637774 FLIIQ13045 1269 aa12.07□□□□□ -0.48
CACNA1A-248ENST00000637774 HDAC1Q13547 482 aaPredicted RBP12.07□□□□□ -0.48
CACNA1A-248ENST00000637774 ARHGAP45Q92619 1136 aa12.07□□□□□ -0.48
CACNA1A-248ENST00000637774 STRN4Q9NRL3 753 aa12.07□□□□□ -0.48
CACNA1A-248ENST00000637774 ZNF330Q9Y3S2 320 aaPredicted RBP12.07□□□□□ -0.48
CACNA1A-248ENST00000637774 ARHGAP23Q9P227 1491 aa12.07□□□□□ -0.48
CACNA1A-248ENST00000637774 C16orf71Q8IYS4 520 aaPredicted RBP12.06□□□□□ -0.48
CACNA1A-248ENST00000637774 EXOC6BQ9Y2D4 811 aa12.06□□□□□ -0.48
CACNA1A-248ENST00000637774 DIP2AQ14689 1571 aa12.06□□□□□ -0.48
CACNA1A-248ENST00000637774 CEP170BQ9Y4F5 1589 aaPredicted RBP12.06□□□□□ -0.48
CACNA1A-248ENST00000637774 OS9Q13438 667 aaPredicted RBP12.06□□□□□ -0.48
CACNA1A-248ENST00000637774 AXIN2Q9Y2T1 843 aa12.06□□□□□ -0.48
CACNA1A-248ENST00000637774 SLC39A6Q13433 755 aa12.05□□□□□ -0.48
CACNA1A-248ENST00000637774 PHAXQ9H814 394 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-248ENST00000637774 TMEM94Q12767 1356 aa12.05□□□□□ -0.48
CACNA1A-248ENST00000637774 USP31Q70CQ4 1352 aa12.05□□□□□ -0.48
CACNA1A-248ENST00000637774 PIK3R4Q99570 1358 aa12.05□□□□□ -0.48
CACNA1A-248ENST00000637774 SLIT1O75093 1534 aa12.05□□□□□ -0.48
CACNA1A-248ENST00000637774 KIF20BQ96Q89 1820 aa12.05□□□□□ -0.48
CACNA1A-248ENST00000637774 HMMRO75330 724 aa12.05□□□□□ -0.48
CACNA1A-248ENST00000637774 SMC5Q8IY18 1101 aa12.05□□□□□ -0.48
CACNA1A-248ENST00000637774 PRDM11Q9NQV5 511 aa12.05□□□□□ -0.48
CACNA1A-248ENST00000637774 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
CACNA1A-248ENST00000637774 ARHGEF10O15013 1369 aa12.05□□□□□ -0.48
CACNA1A-248ENST00000637774 GCC1Q96CN9 775 aa12.04□□□□□ -0.48
CACNA1A-248ENST00000637774 C22orf23Q9BZE7 217 aa12.04□□□□□ -0.48
CACNA1A-248ENST00000637774 CADPS2Q86UW7 1296 aa12.04□□□□□ -0.48
CACNA1A-248ENST00000637774 PIP4K2AP48426 406 aaPredicted RBP12.04□□□□□ -0.48
CACNA1A-248ENST00000637774 TSHZ3Q63HK5 1081 aa12.04□□□□□ -0.48
CACNA1A-248ENST00000637774 MAP3K5Q99683 1374 aa12.03□□□□□ -0.48
CACNA1A-248ENST00000637774 MYL6BP14649 208 aa12.03□□□□□ -0.48
CACNA1A-248ENST00000637774 NUCB1Q02818 461 aa12.03□□□□□ -0.48
CACNA1A-248ENST00000637774 SIRT2Q8IXJ6 389 aa12.03□□□□□ -0.48
CACNA1A-248ENST00000637774 CHPF2Q9P2E5 772 aa12.03□□□□□ -0.48
CACNA1A-248ENST00000637774 TATP17735 454 aaPredicted RBP12.02□□□□□ -0.48
CACNA1A-248ENST00000637774 EVA1CP58658 441 aa12.02□□□□□ -0.48
CACNA1A-248ENST00000637774 TOM1L2Q6ZVM7 507 aa12.02□□□□□ -0.48
CACNA1A-248ENST00000637774 ARHGEF25Q86VW2 580 aa12.02□□□□□ -0.48
CACNA1A-248ENST00000637774 TRIM6-TRIM34B2RNG4 842 aa12.02□□□□□ -0.49
CACNA1A-248ENST00000637774 GNAI2P04899 355 aa12.02□□□□□ -0.49
CACNA1A-248ENST00000637774 UBTFL1P0CB47 393 aaPredicted RBP12.02□□□□□ -0.49
CACNA1A-248ENST00000637774 DDX54Q8TDD1 881 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-248ENST00000637774 OTUD7AQ8TE49 926 aaPredicted RBP12.02□□□□□ -0.49
CACNA1A-248ENST00000637774 MSH6P52701 1360 aa12.02□□□□□ -0.49
CACNA1A-248ENST00000637774 SETD1AO15047 1707 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-248ENST00000637774 ABCC4O15439 1325 aa12.01□□□□□ -0.49
CACNA1A-248ENST00000637774 CCT4P50991 539 aaKnown RBP12.01□□□□□ -0.49
CACNA1A-248ENST00000637774 UBE2Q2Q8WVN8 375 aa12.01□□□□□ -0.49
CACNA1A-248ENST00000637774 C9orf78Q9NZ63 289 aaPredicted RBP12.01□□□□□ -0.49
CACNA1A-248ENST00000637774 ADGRB2O60241 1585 aa12.01□□□□□ -0.49
CACNA1A-248ENST00000637774 PI4KAP2A4QPH2 592 aa12.01□□□□□ -0.49
CACNA1A-248ENST00000637774 ANKARQ7Z5J8 1434 aa12.01□□□□□ -0.49
CACNA1A-248ENST00000637774 PI4KAP1Q8N8J0 262 aa12.01□□□□□ -0.49
CACNA1A-248ENST00000637774 RILPL2Q969X0 211 aa12.01□□□□□ -0.49
CACNA1A-248ENST00000637774 IL1RAPL2Q9NP60 686 aa12.01□□□□□ -0.49
CACNA1A-248ENST00000637774 LRRFIP2Q9Y608 721 aaKnown RBP12.01□□□□□ -0.49
CACNA1A-248ENST00000637774 PTPRCP08575 1304 aa12.01□□□□□ -0.49
CACNA1A-248ENST00000637774 ADGRL3Q9HAR2 1447 aa12.01□□□□□ -0.49
CACNA1A-248ENST00000637774 ITSN1Q15811 1721 aa12□□□□□ -0.49
CACNA1A-248ENST00000637774 TTC5Q8N0Z6 440 aa12□□□□□ -0.49
CACNA1A-248ENST00000637774 USP19O94966 1318 aa12□□□□□ -0.49
CACNA1A-248ENST00000637774 DEKP35659 375 aaKnown RBP12□□□□□ -0.49
CACNA1A-248ENST00000637774 CEP85Q6P2H3 762 aa12□□□□□ -0.49
CACNA1A-248ENST00000637774 PRAMEF22A3QJZ6 481 aa11.99□□□□□ -0.49
CACNA1A-248ENST00000637774 AMOTQ4VCS5 1084 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms