RNA–Protein interactions for RNA: ENST00000637490.1

SYNGAP1-221, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 132 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-221ENST00000637490 CCDC159P0C7I6 412 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 SLFN14P0C7P3 912 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 VCAM1P19320 739 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 ATICP31939 592 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 MAP2K2P36507 400 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 SESN3P58005 492 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 ICA1Q05084 483 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 IRF5Q13568 498 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 RABEP1Q15276 862 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 TAF7Q15545 349 aaPredicted RBP3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 C4orf46Q504U0 113 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 DNAJC21Q5F1R6 531 aaKnown RBP3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 MFSD4BQ5TF39 518 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 CCDC30Q5VVM6 783 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 LARP1BQ659C4 914 aaKnown RBP3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 MCTP2Q6DN12 878 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 TTLL5Q6EMB2 1281 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 C16orf87Q6PH81 154 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 CADPS2Q86UW7 1296 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 CCDC191Q8NCU4 936 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 C1orf131Q8NDD1 294 aaKnown RBP3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 ANKRD20A12PQ8NF67 263 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 TATDN2Q93075 761 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 CCDC47Q96A33 483 aaKnown RBP3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 AK7Q96M32 723 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 GBP4Q96PP9 640 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 PPP1R9BQ96SB3 815 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 SLX1AQ9BQ83 275 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 SCAPERQ9BY12 1400 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 BACH2Q9BYV9 841 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 RWDD1Q9H446 243 aaPredicted RBP3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 TRPV5Q9NQA5 729 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 IRAK4Q9NWZ3 460 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 USP25Q9UHP3 1055 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 NRBP1Q9UHY1 535 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 JRKLQ9Y4A0 524 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 PEG3Q9GZU2 1588 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 BAZ1BQ9UIG0 1483 aaKnown RBP3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 RBM47A0AV96 593 aaKnown RBP3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 SHTN1A0MZ66 631 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 ERICH4A6NGS2 130 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 U2SURPO15042 1029 aaKnown RBP3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 OATP04181 439 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 FAM163BP0C2L3 166 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 TNNT1P13805 278 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 FOSL1P15407 271 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 STIP1P31948 543 aaKnown RBP3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 RDXP35241 583 aaKnown RBP3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 RAD51AP2Q09MP3 1159 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 CCDC15Q0P6D6 951 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 COL19A1Q14993 1142 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 RBBP5Q15291 538 aaKnown RBP3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 TERF2Q15554 542 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 ZNF394Q53GI3 561 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 UBE2Q1Q7Z7E8 422 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 C11orf96Q7Z7L8 435 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 PCGF5Q86SE9 256 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 PABPN1Q86U42 306 aaKnown RBP eCLIP3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 LCA5Q86VQ0 697 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 NCAPG2Q86XI2 1143 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 HSCBQ8IWL3 235 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 CCAR1Q8IX12 1150 aaKnown RBP3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 RPUSD2Q8IZ73 545 aaKnown RBP3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 MYOCDQ8IZQ8 938 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 MIGA1Q8NAN2 632 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 RETREG2Q8NC44 543 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 PMFBP1Q8TBY8 1022 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 HDAC7Q8WUI4 952 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 FMNL2Q96PY5 1086 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 TRIM7Q9C029 511 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 GRPEL1Q9HAV7 217 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 IFT122Q9HBG6 1241 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 TMOD4Q9NZQ9 345 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 CPSF2Q9P2I0 782 aaKnown RBP3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 CCDC39Q9UFE4 941 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 BLOC1S6Q9UL45 172 aa3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 MORC2Q9Y6X9 1032 aaPredicted RBP3.05□□□□□ -1.92
SYNGAP1-221ENST00000637490 NPHP1O15259 732 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 C21orf2O43822 256 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 TRAK2O60296 914 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 TRIM37O94972 964 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 RPL17P18621 184 aaKnown RBP3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 PDE4AP27815 886 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 ALDH1B1P30837 517 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 USP8P40818 1118 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 PRPHP41219 470 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 NUCB2P80303 420 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 SFSWAPQ12872 951 aaKnown RBP3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 FLIIQ13045 1269 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 MKRN3Q13064 507 aaKnown RBP3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 PRPF4BQ13523 1007 aaKnown RBP3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 PDIA5Q14554 519 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 SYCP1Q15431 976 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 ATP2B3Q16720 1220 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 SLC5A9Q2M3M2 681 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 CCDC92Q53HC0 331 aaPredicted RBP3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 ACBD5Q5T8D3 534 aaPredicted RBP3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 RNF20Q5VTR2 975 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 CCDC70Q6NSX1 233 aa3.04□□□□□ -1.92
SYNGAP1-221ENST00000637490 LEKR1Q6ZMV7 388 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms