RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 SEPT12Q8IYM1 358 aa20.12■□□□□ 0.81
CTSD-211ENST00000637387 TRMT2AQ8IZ69 625 aaKnown RBP20.12■□□□□ 0.81
CTSD-211ENST00000637387 SLFN5Q08AF3 891 aa20.11■□□□□ 0.81
CTSD-211ENST00000637387 DUSP27Q5VZP5 1158 aa20.11■□□□□ 0.81
CTSD-211ENST00000637387 LTV1Q96GA3 475 aaPredicted RBP20.11■□□□□ 0.81
CTSD-211ENST00000637387 PRDM11Q9NQV5 511 aa20.11■□□□□ 0.81
CTSD-211ENST00000637387 BRWD3Q6RI45 1802 aa20.11■□□□□ 0.81
CTSD-211ENST00000637387 ERBB3P21860 1342 aa20.11■□□□□ 0.81
CTSD-211ENST00000637387 NFE2L2Q16236 605 aa20.1■□□□□ 0.81
CTSD-211ENST00000637387 CCDC9Q9Y3X0 531 aaKnown RBP20.09■□□□□ 0.81
CTSD-211ENST00000637387 NBPF6Q5VWK0 638 aa20.08■□□□□ 0.81
CTSD-211ENST00000637387 NBPF4Q96M43 638 aa20.08■□□□□ 0.81
CTSD-211ENST00000637387 RIPK4P57078 832 aa20.08■□□□□ 0.8
CTSD-211ENST00000637387 CCDC125Q86Z20 511 aa20.08■□□□□ 0.8
CTSD-211ENST00000637387 ANKRD24Q8TF21 1146 aa20.08■□□□□ 0.8
CTSD-211ENST00000637387 SPATA31A5Q5VU36 1347 aa20.07■□□□□ 0.8
CTSD-211ENST00000637387 SPATA31A7Q8IWB4 1347 aa20.07■□□□□ 0.8
CTSD-211ENST00000637387 WDR63Q8IWG1 891 aa20.07■□□□□ 0.8
CTSD-211ENST00000637387 USHBP1Q8N6Y0 703 aa20.07■□□□□ 0.8
CTSD-211ENST00000637387 PKD1L3Q7Z443 1732 aa20.06■□□□□ 0.8
CTSD-211ENST00000637387 COL5A2P05997 1499 aaPredicted RBP20.06■□□□□ 0.8
CTSD-211ENST00000637387 CHRNA2Q15822 529 aa20.06■□□□□ 0.8
CTSD-211ENST00000637387 GTF3C3Q9Y5Q9 886 aa20.06■□□□□ 0.8
CTSD-211ENST00000637387 EP400Q96L91 3159 aa20.04■□□□□ 0.8
CTSD-211ENST00000637387 E9PSI1 815 aa20.04■□□□□ 0.8
CTSD-211ENST00000637387 NEFMP07197 916 aa20.04■□□□□ 0.8
CTSD-211ENST00000637387 FAM98CQ17RN3 349 aaKnown RBP20.04■□□□□ 0.8
CTSD-211ENST00000637387 SUPT16HQ9Y5B9 1047 aaKnown RBP20.04■□□□□ 0.8
CTSD-211ENST00000637387 KRT27Q7Z3Y8 459 aa20.03■□□□□ 0.8
CTSD-211ENST00000637387 PARP4Q9UKK3 1724 aaKnown RBP20.03■□□□□ 0.8
CTSD-211ENST00000637387 WNK3Q9BYP7 1800 aa20.02■□□□□ 0.8
CTSD-211ENST00000637387 ADAMTS7Q9UKP4 1686 aa20.02■□□□□ 0.8
CTSD-211ENST00000637387 RNF123Q5XPI4 1314 aa20.02■□□□□ 0.8
CTSD-211ENST00000637387 SHANK3Q9BYB0 1731 aa20.01■□□□□ 0.79
CTSD-211ENST00000637387 IL16Q14005 1332 aa20.01■□□□□ 0.79
CTSD-211ENST00000637387 SPATA31A1Q5TZJ5 1347 aa20.01■□□□□ 0.79
CTSD-211ENST00000637387 MTHFSDQ2M296 383 aaKnown RBP20.01■□□□□ 0.79
CTSD-211ENST00000637387 THSD7AQ9UPZ6 1657 aa20■□□□□ 0.79
CTSD-211ENST00000637387 MEGF6O75095 1541 aa20■□□□□ 0.79
CTSD-211ENST00000637387 THUMPD2Q9BTF0 503 aaKnown RBP19.99■□□□□ 0.79
CTSD-211ENST00000637387 SIPA1L3O60292 1781 aaPredicted RBP19.98■□□□□ 0.79
CTSD-211ENST00000637387 STRN4Q9NRL3 753 aa19.98■□□□□ 0.79
CTSD-211ENST00000637387 FANCIQ9NVI1 1328 aa19.97■□□□□ 0.79
CTSD-211ENST00000637387 LMOD3Q0VAK6 560 aa19.96■□□□□ 0.79
CTSD-211ENST00000637387 RCAN3Q9UKA8 241 aa19.96■□□□□ 0.79
CTSD-211ENST00000637387 SCN11AQ9UI33 1791 aa19.96■□□□□ 0.79
CTSD-211ENST00000637387 WDR17Q8IZU2 1322 aa19.96■□□□□ 0.79
CTSD-211ENST00000637387 A0A0G2JS52 829 aa19.95■□□□□ 0.78
CTSD-211ENST00000637387 CRB1P82279 1406 aa19.95■□□□□ 0.78
CTSD-211ENST00000637387 MYT1Q01538 1121 aa19.95■□□□□ 0.78
CTSD-211ENST00000637387 DCTN1Q14203 1278 aa19.95■□□□□ 0.78
CTSD-211ENST00000637387 GAS2L2Q8NHY3 880 aa19.95■□□□□ 0.78
CTSD-211ENST00000637387 EVA1CP58658 441 aa19.95■□□□□ 0.78
CTSD-211ENST00000637387 MAP3K5Q99683 1374 aa19.94■□□□□ 0.78
CTSD-211ENST00000637387 PLEKHG2Q9H7P9 1386 aa19.94■□□□□ 0.78
CTSD-211ENST00000637387 KDM3BQ7LBC6 1761 aa19.94■□□□□ 0.78
CTSD-211ENST00000637387 ZNF853P0CG23 659 aa19.94■□□□□ 0.78
CTSD-211ENST00000637387 LARP1Q6PKG0 1096 aaKnown RBP19.94■□□□□ 0.78
CTSD-211ENST00000637387 BARGINQ6ZT62 677 aa19.94■□□□□ 0.78
CTSD-211ENST00000637387 TSR2Q969E8 191 aaKnown RBP19.94■□□□□ 0.78
CTSD-211ENST00000637387 MYH16Q9H6N6 1097 aa19.92■□□□□ 0.78
CTSD-211ENST00000637387 NLRP2Q9NX02 1062 aa19.92■□□□□ 0.78
CTSD-211ENST00000637387 MCM10Q7L590 875 aa19.91■□□□□ 0.78
CTSD-211ENST00000637387 DEFB132Q7Z7B7 95 aa19.91■□□□□ 0.78
CTSD-211ENST00000637387 IFT57Q9NWB7 429 aa19.91■□□□□ 0.78
CTSD-211ENST00000637387 OVOS2A0A0G2JMS6 1433 aa19.9■□□□□ 0.78
CTSD-211ENST00000637387 CSB-PGBD3P0DP91 1061 aa19.9■□□□□ 0.78
CTSD-211ENST00000637387 SF3B2Q13435 895 aaKnown RBP19.9■□□□□ 0.78
CTSD-211ENST00000637387 THRAP3Q9Y2W1 955 aaKnown RBP19.9■□□□□ 0.78
CTSD-211ENST00000637387 CEMIPQ8WUJ3 1361 aa19.89■□□□□ 0.77
CTSD-211ENST00000637387 RRP1P56182 461 aaKnown RBP19.89■□□□□ 0.77
CTSD-211ENST00000637387 CALD1Q05682 793 aaKnown RBP19.89■□□□□ 0.77
CTSD-211ENST00000637387 FAM182BQ5T319 152 aa19.89■□□□□ 0.77
CTSD-211ENST00000637387 USP35Q9P2H5 1018 aa19.89■□□□□ 0.77
CTSD-211ENST00000637387 GNAT3A8MTJ3 354 aa19.88■□□□□ 0.77
CTSD-211ENST00000637387 HTATSF1O43719 755 aaKnown RBP19.88■□□□□ 0.77
CTSD-211ENST00000637387 CFAP44Q96MT7 982 aa19.88■□□□□ 0.77
CTSD-211ENST00000637387 FKBP8Q14318 412 aa19.87■□□□□ 0.77
CTSD-211ENST00000637387 MBIPQ9NS73 344 aa19.87■□□□□ 0.77
CTSD-211ENST00000637387 GNAI1P63096 354 aa19.87■□□□□ 0.77
CTSD-211ENST00000637387 IRX6P78412 446 aaPredicted RBP19.87■□□□□ 0.77
CTSD-211ENST00000637387 EXOSC9Q06265 439 aaKnown RBP19.87■□□□□ 0.77
CTSD-211ENST00000637387 PLEKHO1Q53GL0 409 aaPredicted RBP19.87■□□□□ 0.77
CTSD-211ENST00000637387 AMOTQ4VCS5 1084 aa19.86■□□□□ 0.77
CTSD-211ENST00000637387 IL17REQ8NFR9 667 aa19.86■□□□□ 0.77
CTSD-211ENST00000637387 ZNF530Q6P9A1 599 aaPredicted RBP19.85■□□□□ 0.77
CTSD-211ENST00000637387 TOM1L2Q6ZVM7 507 aa19.85■□□□□ 0.77
CTSD-211ENST00000637387 CARD10Q9BWT7 1032 aa19.85■□□□□ 0.77
CTSD-211ENST00000637387 TOGARAM1Q9Y4F4 1720 aa19.85■□□□□ 0.77
CTSD-211ENST00000637387 DISP2A7MBM2 1401 aa19.85■□□□□ 0.77
CTSD-211ENST00000637387 NEFLP07196 543 aa19.84■□□□□ 0.77
CTSD-211ENST00000637387 BAG6P46379 1132 aa19.84■□□□□ 0.77
CTSD-211ENST00000637387 AKAP4Q5JQC9 854 aa19.84■□□□□ 0.77
CTSD-211ENST00000637387 FAM196AQ6ZSG2 479 aa19.84■□□□□ 0.77
CTSD-211ENST00000637387 RAPGEF4Q8WZA2 1011 aa19.84■□□□□ 0.77
CTSD-211ENST00000637387 KDM6AO15550 1401 aaPredicted RBP19.84■□□□□ 0.77
CTSD-211ENST00000637387 MRC1P22897 1456 aa19.84■□□□□ 0.77
CTSD-211ENST00000637387 CHL1O00533 1208 aa19.83■□□□□ 0.77
CTSD-211ENST00000637387 TATP17735 454 aaPredicted RBP19.83■□□□□ 0.77
CTSD-211ENST00000637387 RTF1Q92541 710 aaKnown RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms