RNA–Protein interactions for RNA: ENST00000637128.1

LINC00959-202, Transcript of HCG1648656, isoform CRA_a, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LINC00959, Length 826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-202ENST00000637128 DDB1Q16531 1140 aa17.3■□□□□ 0.36
LINC00959-202ENST00000637128 IL2RBP14784 551 aa17.28■□□□□ 0.36
LINC00959-202ENST00000637128 MARCH10Q8NA82 808 aaPredicted RBP17.28■□□□□ 0.36
LINC00959-202ENST00000637128 OVOS2A0A0G2JMS6 1433 aa17.28■□□□□ 0.36
LINC00959-202ENST00000637128 DEFB132Q7Z7B7 95 aa17.27■□□□□ 0.36
LINC00959-202ENST00000637128 EIF4A2Q14240 407 aaKnown RBP17.26■□□□□ 0.35
LINC00959-202ENST00000637128 CDCA7Q9BWT1 371 aaPredicted RBP17.26■□□□□ 0.35
LINC00959-202ENST00000637128 NCAPD2Q15021 1401 aa17.26■□□□□ 0.35
LINC00959-202ENST00000637128 TRIM37O94972 964 aa17.25■□□□□ 0.35
LINC00959-202ENST00000637128 NPC1L1Q9UHC9 1359 aa17.25■□□□□ 0.35
LINC00959-202ENST00000637128 ZEB1P37275 1124 aaPredicted RBP17.24■□□□□ 0.35
LINC00959-202ENST00000637128 FAM196AQ6ZSG2 479 aa17.24■□□□□ 0.35
LINC00959-202ENST00000637128 PTF1AQ7RTS3 328 aa17.24■□□□□ 0.35
LINC00959-202ENST00000637128 PKD1L3Q7Z443 1732 aa17.24■□□□□ 0.35
LINC00959-202ENST00000637128 EXOC5O00471 708 aa17.23■□□□□ 0.35
LINC00959-202ENST00000637128 EYA1Q99502 592 aa17.23■□□□□ 0.35
LINC00959-202ENST00000637128 DOT1LQ8TEK3 1739 aa17.22■□□□□ 0.35
LINC00959-202ENST00000637128 NHSQ6T4R5 1651 aa17.22■□□□□ 0.35
LINC00959-202ENST00000637128 COL3A1P02461 1466 aaPredicted RBP17.2■□□□□ 0.34
LINC00959-202ENST00000637128 MTHFSP49914 203 aa17.2■□□□□ 0.34
LINC00959-202ENST00000637128 CCDC125Q86Z20 511 aa17.2■□□□□ 0.34
LINC00959-202ENST00000637128 SF3B2Q13435 895 aaKnown RBP17.19■□□□□ 0.34
LINC00959-202ENST00000637128 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
LINC00959-202ENST00000637128 DDX54Q8TDD1 881 aaKnown RBP17.19■□□□□ 0.34
LINC00959-202ENST00000637128 BCL9O00512 1426 aa17.19■□□□□ 0.34
LINC00959-202ENST00000637128 RREB1Q92766 1687 aa17.19■□□□□ 0.34
LINC00959-202ENST00000637128 IGSF1Q8N6C5 1336 aa17.19■□□□□ 0.34
LINC00959-202ENST00000637128 TOGARAM1Q9Y4F4 1720 aa17.18■□□□□ 0.34
LINC00959-202ENST00000637128 EN1Q05925 392 aaPredicted RBP17.18■□□□□ 0.34
LINC00959-202ENST00000637128 RAPGEF4Q8WZA2 1011 aa17.18■□□□□ 0.34
LINC00959-202ENST00000637128 ACSBG1Q96GR2 724 aa17.18■□□□□ 0.34
LINC00959-202ENST00000637128 BTAF1O14981 1849 aa17.17■□□□□ 0.34
LINC00959-202ENST00000637128 KCNQ2O43526 872 aa17.17■□□□□ 0.34
LINC00959-202ENST00000637128 DDX10Q13206 875 aaKnown RBP17.17■□□□□ 0.34
LINC00959-202ENST00000637128 NUP188Q5SRE5 1749 aa17.17■□□□□ 0.34
LINC00959-202ENST00000637128 AEBP1Q8IUX7 1158 aa17.17■□□□□ 0.34
LINC00959-202ENST00000637128 APBA3O96018 575 aa17.16■□□□□ 0.34
LINC00959-202ENST00000637128 TATP17735 454 aaPredicted RBP17.16■□□□□ 0.34
LINC00959-202ENST00000637128 IL13P35225 146 aa17.16■□□□□ 0.34
LINC00959-202ENST00000637128 ZCRB1Q8TBF4 217 aaKnown RBP17.16■□□□□ 0.34
LINC00959-202ENST00000637128 BAG6P46379 1132 aa17.15■□□□□ 0.34
LINC00959-202ENST00000637128 EZH2Q15910 746 aaKnown RBP17.15■□□□□ 0.34
LINC00959-202ENST00000637128 KAT6BQ8WYB5 2073 aa17.15■□□□□ 0.34
LINC00959-202ENST00000637128 RGPD3A6NKT7 1758 aaPredicted RBP17.15■□□□□ 0.34
LINC00959-202ENST00000637128 RGPD4Q7Z3J3 1758 aa17.15■□□□□ 0.34
LINC00959-202ENST00000637128 CAMKK2Q96RR4 588 aa17.13■□□□□ 0.33
LINC00959-202ENST00000637128 PARD3Q8TEW0 1356 aa17.13■□□□□ 0.33
LINC00959-202ENST00000637128 CYP27B1O15528 508 aa17.12■□□□□ 0.33
LINC00959-202ENST00000637128 PPP2R1AP30153 589 aa17.12■□□□□ 0.33
LINC00959-202ENST00000637128 BCL11BQ9C0K0 894 aaPredicted RBP17.12■□□□□ 0.33
LINC00959-202ENST00000637128 PCDH11XQ9BZA7 1347 aa17.11■□□□□ 0.33
LINC00959-202ENST00000637128 PCDH11YQ9BZA8 1340 aa17.11■□□□□ 0.33
LINC00959-202ENST00000637128 ITGB4P16144 1822 aa17.1■□□□□ 0.33
LINC00959-202ENST00000637128 SULT6B1Q6IMI4 303 aa17.1■□□□□ 0.33
LINC00959-202ENST00000637128 KDRP35968 1356 aa17.1■□□□□ 0.33
LINC00959-202ENST00000637128 HMOX1P09601 288 aa17.09■□□□□ 0.33
LINC00959-202ENST00000637128 DIAPH1O60610 1272 aaKnown RBP17.08■□□□□ 0.32
LINC00959-202ENST00000637128 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
LINC00959-202ENST00000637128 PRIM1P49642 420 aaKnown RBP17.07■□□□□ 0.32
LINC00959-202ENST00000637128 SYTL4Q96C24 671 aaPredicted RBP17.07■□□□□ 0.32
LINC00959-202ENST00000637128 SPG7Q9UQ90 795 aa17.06■□□□□ 0.32
LINC00959-202ENST00000637128 PHKG2P15735 406 aa17.05■□□□□ 0.32
LINC00959-202ENST00000637128 PROM2Q8N271 834 aa17.05■□□□□ 0.32
LINC00959-202ENST00000637128 VIRMAQ69YN4 1812 aaKnown RBP17.05■□□□□ 0.32
LINC00959-202ENST00000637128 LY75O60449 1722 aa17.04■□□□□ 0.32
LINC00959-202ENST00000637128 PAPPAQ13219 1627 aa17.04■□□□□ 0.32
LINC00959-202ENST00000637128 PSDA5PKW4 1024 aaPredicted RBP17.04■□□□□ 0.32
LINC00959-202ENST00000637128 U2SURPO15042 1029 aaKnown RBP17.04■□□□□ 0.32
LINC00959-202ENST00000637128 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
LINC00959-202ENST00000637128 PLSCR1O15162 318 aa17.03■□□□□ 0.32
LINC00959-202ENST00000637128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.03■□□□□ 0.32
LINC00959-202ENST00000637128 PLEKHG2Q9H7P9 1386 aa17.02■□□□□ 0.32
LINC00959-202ENST00000637128 ZNF316A6NFI3 1004 aaPredicted RBP17.02■□□□□ 0.32
LINC00959-202ENST00000637128 ZNF530Q6P9A1 599 aaPredicted RBP17.02■□□□□ 0.32
LINC00959-202ENST00000637128 ANO8Q9HCE9 1232 aaPredicted RBP17.02■□□□□ 0.32
LINC00959-202ENST00000637128 NKX1-1Q15270 411 aaPredicted RBP17.01■□□□□ 0.31
LINC00959-202ENST00000637128 TXNRD1Q16881 649 aa17.01■□□□□ 0.31
LINC00959-202ENST00000637128 IFNL2Q8IZJ0 200 aa17.01■□□□□ 0.31
LINC00959-202ENST00000637128 CFAP53Q96M91 514 aa17.01■□□□□ 0.31
LINC00959-202ENST00000637128 SCN11AQ9UI33 1791 aa17.01■□□□□ 0.31
LINC00959-202ENST00000637128 KCNQ4P56696 695 aa17■□□□□ 0.31
LINC00959-202ENST00000637128 R3HDM1Q15032 1099 aaKnown RBP17■□□□□ 0.31
LINC00959-202ENST00000637128 PLEKHO1Q53GL0 409 aaPredicted RBP17■□□□□ 0.31
LINC00959-202ENST00000637128 SRCAPQ6ZRS2 3230 aa16.99■□□□□ 0.31
LINC00959-202ENST00000637128 MPRIPQ6WCQ1 1025 aa16.99■□□□□ 0.31
LINC00959-202ENST00000637128 LRRC4BQ9NT99 713 aa16.99■□□□□ 0.31
LINC00959-202ENST00000637128 TUBGCP6Q96RT7 1819 aa16.98■□□□□ 0.31
LINC00959-202ENST00000637128 RALBP1Q15311 655 aa16.98■□□□□ 0.31
LINC00959-202ENST00000637128 RSPH6AQ9H0K4 717 aa16.98■□□□□ 0.31
LINC00959-202ENST00000637128 ADAMTS7Q9UKP4 1686 aa16.97■□□□□ 0.31
LINC00959-202ENST00000637128 MTHFSDQ2M296 383 aaKnown RBP16.97■□□□□ 0.31
LINC00959-202ENST00000637128 AMOTQ4VCS5 1084 aa16.97■□□□□ 0.31
LINC00959-202ENST00000637128 PIGBQ92521 554 aa16.97■□□□□ 0.31
LINC00959-202ENST00000637128 U2AF1L5P0DN76 240 aaPredicted RBP16.96■□□□□ 0.31
LINC00959-202ENST00000637128 PRKAR2BP31323 418 aa16.96■□□□□ 0.31
LINC00959-202ENST00000637128 U2AF1Q01081 240 aaKnown RBP eCLIP16.96■□□□□ 0.31
LINC00959-202ENST00000637128 C5P01031 1676 aa16.96■□□□□ 0.31
LINC00959-202ENST00000637128 TAF1LQ8IZX4 1826 aa16.96■□□□□ 0.3
LINC00959-202ENST00000637128 MYBBP1AQ9BQG0 1328 aaKnown RBP16.96■□□□□ 0.3
LINC00959-202ENST00000637128 CASZ1Q86V15 1759 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms