RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 TTC21AQ8NDW8 1320 aa9.26□□□□□ -0.93
UPF3B-205ENST00000636792 A0A1W2PP64 1363 aa9.25□□□□□ -0.93
UPF3B-205ENST00000636792 SSH2Q76I76 1423 aa9.25□□□□□ -0.93
UPF3B-205ENST00000636792 BRINP3Q76B58 766 aa9.25□□□□□ -0.93
UPF3B-205ENST00000636792 CRYBG1Q9Y4K1 1723 aa9.25□□□□□ -0.93
UPF3B-205ENST00000636792 KTN1Q86UP2 1357 aaKnown RBP9.24□□□□□ -0.93
UPF3B-205ENST00000636792 TNS3Q68CZ2 1445 aa9.24□□□□□ -0.93
UPF3B-205ENST00000636792 PIK3C2AO00443 1686 aa9.24□□□□□ -0.93
UPF3B-205ENST00000636792 RGL2O15211 777 aa9.24□□□□□ -0.93
UPF3B-205ENST00000636792 ESCO1Q5FWF5 840 aa9.24□□□□□ -0.93
UPF3B-205ENST00000636792 RBM33Q96EV2 1170 aaKnown RBP9.24□□□□□ -0.93
UPF3B-205ENST00000636792 KCNK17Q96T54 332 aa9.24□□□□□ -0.93
UPF3B-205ENST00000636792 ABCA3Q99758 1704 aa9.24□□□□□ -0.93
UPF3B-205ENST00000636792 ACEP12821 1306 aa9.24□□□□□ -0.93
UPF3B-205ENST00000636792 ARHGEF10O15013 1369 aa9.24□□□□□ -0.93
UPF3B-205ENST00000636792 ABCC6O95255 1503 aa9.23□□□□□ -0.93
UPF3B-205ENST00000636792 C11orf95C9JLR9 678 aaPredicted RBP9.23□□□□□ -0.93
UPF3B-205ENST00000636792 UBAP1LF5GYI3 381 aa9.23□□□□□ -0.93
UPF3B-205ENST00000636792 PSME1Q06323 249 aa9.23□□□□□ -0.93
UPF3B-205ENST00000636792 GPHNQ9NQX3 736 aaPredicted RBP9.23□□□□□ -0.93
UPF3B-205ENST00000636792 SOS2Q07890 1332 aaPredicted RBP9.23□□□□□ -0.93
UPF3B-205ENST00000636792 PHRF1Q9P1Y6 1649 aaKnown RBP9.23□□□□□ -0.93
UPF3B-205ENST00000636792 MARF1Q9Y4F3 1742 aaKnown RBP9.22□□□□□ -0.93
UPF3B-205ENST00000636792 NGDNQ8NEJ9 315 aaKnown RBP9.22□□□□□ -0.93
UPF3B-205ENST00000636792 CABP1Q9NZU7 370 aa9.22□□□□□ -0.93
UPF3B-205ENST00000636792 USP31Q70CQ4 1352 aa9.22□□□□□ -0.93
UPF3B-205ENST00000636792 NSD3Q9BZ95 1437 aa9.22□□□□□ -0.93
UPF3B-205ENST00000636792 SLIT3O75094 1523 aa9.21□□□□□ -0.93
UPF3B-205ENST00000636792 RGS20O76081 388 aa9.21□□□□□ -0.94
UPF3B-205ENST00000636792 PTPN5P54829 565 aa9.21□□□□□ -0.94
UPF3B-205ENST00000636792 TMC1Q8TDI8 760 aa9.21□□□□□ -0.94
UPF3B-205ENST00000636792 ORAI2Q96SN7 254 aa9.21□□□□□ -0.94
UPF3B-205ENST00000636792 SLC12A5Q9H2X9 1139 aa9.21□□□□□ -0.94
UPF3B-205ENST00000636792 CGNL1Q0VF96 1302 aa9.21□□□□□ -0.94
UPF3B-205ENST00000636792 OVOS2A0A0J9YW53 1432 aa9.21□□□□□ -0.94
UPF3B-205ENST00000636792 OVOS2Q6IE36 1432 aa9.21□□□□□ -0.94
UPF3B-205ENST00000636792 NUTM2FA1L443 756 aa9.2□□□□□ -0.94
UPF3B-205ENST00000636792 VPS9D1Q9Y2B5 631 aa9.2□□□□□ -0.94
UPF3B-205ENST00000636792 DSG2Q14126 1118 aa9.19□□□□□ -0.94
UPF3B-205ENST00000636792 FBXO41Q8TF61 875 aa9.19□□□□□ -0.94
UPF3B-205ENST00000636792 KNSTRNQ9Y448 316 aa9.19□□□□□ -0.94
UPF3B-205ENST00000636792 SPATA31A3Q5VYP0 1347 aa9.19□□□□□ -0.94
UPF3B-205ENST00000636792 FOXO3O43524 673 aa9.18□□□□□ -0.94
UPF3B-205ENST00000636792 USP19O94966 1318 aa9.18□□□□□ -0.94
UPF3B-205ENST00000636792 KIF24Q5T7B8 1368 aa9.18□□□□□ -0.94
UPF3B-205ENST00000636792 KRT28Q7Z3Y7 464 aa9.18□□□□□ -0.94
UPF3B-205ENST00000636792 TTC21BQ7Z4L5 1316 aa9.18□□□□□ -0.94
UPF3B-205ENST00000636792 PMFBP1Q8TBY8 1022 aa9.18□□□□□ -0.94
UPF3B-205ENST00000636792 LRRC59Q96AG4 307 aaKnown RBP9.18□□□□□ -0.94
UPF3B-205ENST00000636792 FAM208AQ9UK61 1670 aaKnown RBP9.17□□□□□ -0.94
UPF3B-205ENST00000636792 JCADQ9P266 1359 aa9.17□□□□□ -0.94
UPF3B-205ENST00000636792 PER1O15534 1290 aaPredicted RBP9.17□□□□□ -0.94
UPF3B-205ENST00000636792 IFFO2Q5TF58 517 aa9.17□□□□□ -0.94
UPF3B-205ENST00000636792 POLR3GLQ9BT43 218 aa9.17□□□□□ -0.94
UPF3B-205ENST00000636792 PANK3Q9H999 370 aa9.17□□□□□ -0.94
UPF3B-205ENST00000636792 LTN1O94822 1766 aa9.17□□□□□ -0.94
UPF3B-205ENST00000636792 NFAT5O94916 1531 aa9.16□□□□□ -0.94
UPF3B-205ENST00000636792 SMG6Q86US8 1419 aaKnown RBP9.16□□□□□ -0.94
UPF3B-205ENST00000636792 AATKQ6ZMQ8 1374 aa9.16□□□□□ -0.94
UPF3B-205ENST00000636792 PNPLA6Q8IY17 1366 aa9.16□□□□□ -0.94
UPF3B-205ENST00000636792 GOLGA8CPA6NN73 597 aa9.16□□□□□ -0.94
UPF3B-205ENST00000636792 NLRP13Q86W25 1043 aa9.16□□□□□ -0.94
UPF3B-205ENST00000636792 SLC4A5Q9BY07 1137 aa9.16□□□□□ -0.94
UPF3B-205ENST00000636792 NWD2Q9ULI1 1742 aa9.16□□□□□ -0.94
UPF3B-205ENST00000636792 RTL1A6NKG5 1358 aa9.15□□□□□ -0.94
UPF3B-205ENST00000636792 MAP2P11137 1827 aaKnown RBP9.15□□□□□ -0.94
UPF3B-205ENST00000636792 SPATA31A6Q5VVP1 1343 aa9.15□□□□□ -0.94
UPF3B-205ENST00000636792 PIP4K2BP78356 416 aa9.15□□□□□ -0.94
UPF3B-205ENST00000636792 AMER1Q5JTC6 1135 aaPredicted RBP9.15□□□□□ -0.94
UPF3B-205ENST00000636792 ZNF454Q8N9F8 522 aa9.15□□□□□ -0.94
UPF3B-205ENST00000636792 KCNH5Q8NCM2 988 aa9.15□□□□□ -0.94
UPF3B-205ENST00000636792 CARD14Q9BXL6 1004 aa9.15□□□□□ -0.94
UPF3B-205ENST00000636792 IRX2Q9BZI1 471 aaPredicted RBP9.15□□□□□ -0.94
UPF3B-205ENST00000636792 COL14A1Q05707 1796 aaKnown RBP9.14□□□□□ -0.95
UPF3B-205ENST00000636792 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.14□□□□□ -0.95
UPF3B-205ENST00000636792 CPDO75976 1380 aa9.14□□□□□ -0.95
UPF3B-205ENST00000636792 PARD3Q8TEW0 1356 aa9.14□□□□□ -0.95
UPF3B-205ENST00000636792 COG3Q96JB2 828 aa9.14□□□□□ -0.95
UPF3B-205ENST00000636792 BCL2L12Q9HB09 334 aa9.14□□□□□ -0.95
UPF3B-205ENST00000636792 FYB1O15117 783 aa9.13□□□□□ -0.95
UPF3B-205ENST00000636792 DDX10Q13206 875 aaKnown RBP9.13□□□□□ -0.95
UPF3B-205ENST00000636792 RALBP1Q15311 655 aa9.13□□□□□ -0.95
UPF3B-205ENST00000636792 ABTB2Q8N961 1025 aa9.13□□□□□ -0.95
UPF3B-205ENST00000636792 OXER1Q8TDS5 423 aa9.13□□□□□ -0.95
UPF3B-205ENST00000636792 CDK12Q9NYV4 1490 aaPredicted RBP9.13□□□□□ -0.95
UPF3B-205ENST00000636792 LMO7Q8WWI1 1683 aa9.13□□□□□ -0.95
UPF3B-205ENST00000636792 PTPREP23469 700 aa9.12□□□□□ -0.95
UPF3B-205ENST00000636792 THSD4Q6ZMP0 1018 aa9.12□□□□□ -0.95
UPF3B-205ENST00000636792 UPF1Q92900 1129 aaKnown RBP eCLIP9.12□□□□□ -0.95
UPF3B-205ENST00000636792 PLCH1Q4KWH8 1693 aa9.12□□□□□ -0.95
UPF3B-205ENST00000636792 BLMP54132 1417 aaPredicted RBP9.12□□□□□ -0.95
UPF3B-205ENST00000636792 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.11□□□□□ -0.95
UPF3B-205ENST00000636792 MRPL50Q8N5N7 158 aaKnown RBP9.11□□□□□ -0.95
UPF3B-205ENST00000636792 COL18A1P39060 1754 aa9.11□□□□□ -0.95
UPF3B-205ENST00000636792 CAMTA1Q9Y6Y1 1673 aa9.1□□□□□ -0.95
UPF3B-205ENST00000636792 A0A0G2JS52 829 aa9.1□□□□□ -0.95
UPF3B-205ENST00000636792 NME9Q86XW9 330 aa9.1□□□□□ -0.95
UPF3B-205ENST00000636792 HS6ST3Q8IZP7 471 aa9.1□□□□□ -0.95
UPF3B-205ENST00000636792 WNT2BQ93097 391 aa9.1□□□□□ -0.95
UPF3B-205ENST00000636792 PLEKHG2Q9H7P9 1386 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms